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  • 1
    Publication Date: 2020-06-15
    Description: Plant functional traits determine vegetation responses to environmental variation, but variation in trait values is large, even within a single site. Likewise, uncertainty in how these traits map to Earth system feedbacks is large. We use a vegetation demographic model (VDM), the Functionally Assembled Terrestrial Ecosystem Simulator (FATES), to explore parameter sensitivity of model predictions, and comparison to observations, at a tropical forest site: Barro Colorado Island in Panama. We define a single 12-dimensional distribution of plant trait variation, derived primarily from observations in Panama, and define plant functional types (PFTs) as random draws from this distribution. We compare several model ensembles, where individual ensemble members vary only in the plant traits that define PFTs, and separate ensembles differ from each other based on either model structural assumptions or non-trait, ecosystem-level parameters, which include (a) the number of competing PFTs present in any simulation and (b) parameters that govern disturbance and height-based light competition. While single-PFT simulations are roughly consistent with observations of productivity at Barro Colorado Island, increasing the number of competing PFTs strongly shifts model predictions towards higher productivity and biomass forests. Different ecosystem variables show greater sensitivity than others to the number of competing PFTs, with the predictions that are most dominated by large trees, such as biomass, being the most sensitive. Changing disturbance and height-sorting parameters, i.e., the rules of competitive trait filtering, shifts regimes of dominance or coexistence between early- and late-successional PFTs in the model. Increases to the extent or severity of disturbance, or to the degree of determinism in height-based light competition, all act to shift the community towards early-successional PFTs. In turn, these shifts in competitive outcomes alter predictions of ecosystem states and fluxes, with more early-successional-dominated forests having lower biomass. It is thus crucial to differentiate between plant traits, which are under competitive pressure in VDMs, from those model parameters that are not and to better understand the relationships between these two types of model parameters to quantify sources of uncertainty in VDMs.
    Print ISSN: 1726-4170
    Electronic ISSN: 1726-4189
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 2
    Publication Date: 2017-11-24
    Description: Biogeochemical models that simulate realistic lower trophic levels dynamics, including the representation of main phytoplankton and zooplankton functional groups, are valuable tools for our understanding of natural and anthropogenic disturbances in marine ecosystems. However, previous three-dimensional biogeochemical modeling studies in the northern and deep Gulf of Mexico (GoM) have used only one phytoplankton and one zooplankton type. To advance our modeling capability of the GoM ecosystem and to investigate the dominant spatial and seasonal patterns phytoplankton biomass, we configured a 14-component biogeochemical model that explicitly represents nanophytoplankton, diatoms, micro-, and mesozooplankton. Our model outputs compare well with satellite and in situ observations, reproducing dominant seasonal patterns in chlorophyll and primary production. The model results show that diatom growth is strongly silica limited (〉 95 %) in the deep GoM, and both nitrogen and silica limited (30–70 %) in the northern shelf. Nanophytoplankton growth is weakly nutrient limited in the Mississippi delta year-round (
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 3
    Publication Date: 2018-07-27
    Description: The angular distribution of the light reflected by the Earth's surface influences top-of-atmosphere (TOA) reflectance values. This surface reflectance anisotropy has implications for UV/Vis satellite retrievals of albedo, clouds, and trace gases such as nitrogen dioxide (NO2). These retrievals routinely assume the surface to reflect light isotropically. Here we show that cloud fractions retrieved from GOME-2A and OMI with the FRESCO and OMCLDO2 algorithms have an east–west bias of 10 % to 50 %, which are highest over vegetation and forested areas, and that this bias originates from the assumption of isotropic surface reflection. To interpret the across-track bias with the DAK radiative transfer model, we implement the bidirectional reflectance distribution function (BRDF) from the Ross–Li semi-empirical model. Testing our implementation against state-of-the-art RTMs LIDORT and SCIATRAN, we find that simulated TOA reflectance generally agrees to within 1 %. We replace the assumption of isotropic surface reflection in the equations used to retrieve cloud fractions over forested scenes with scattering kernels and corresponding BRDF parameters from a daily high-resolution database derived from 16 years' worth of MODIS measurements. By doing this, the east–west bias in the simulated cloud fractions largely vanishes. We conclude that across-track biases in cloud fractions can be explained by cloud algorithms that do not adequately account for the effects of surface reflectance anisotropy. The implications for NO2 air mass factor (AMF) calculations are substantial. Under moderately polluted NO2 and backward-scattering conditions, clear-sky AMFs are up to 20 % higher and cloud radiance fractions up to 40 % lower if surface anisotropic reflection is accounted for. The combined effect of these changes is that NO2 total AMFs increase by up to 30 % for backward-scattering geometries (and decrease by up to 35 % for forward-scattering geometries), which is stronger than the effect of either contribution alone. In an unpolluted troposphere, surface BRDF effects on cloud fraction counteract (and largely cancel) the effect on the clear-sky AMF. Our results emphasise that surface reflectance anisotropy needs to be taken into account in a coherent manner for more realistic and accurate retrievals of clouds and NO2 from UV/Vis satellite sensors. These improvements will be beneficial for current sensors, in particular for the recently launched TROPOMI instrument with a high spatial resolution.
    Print ISSN: 1867-1381
    Electronic ISSN: 1867-8548
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 4
    Publication Date: 2018-02-28
    Description: Atmospheric methane is comprised of multiple isotopic molecules, with the most abundant being 12CH4 and 13CH4, making up 98 and 1.1 % of atmospheric methane respectively. It has been shown that is it possible to distinguish between sources of methane (biogenic methane, e.g. marshland, or abiogenic methane, e.g. fracking) via a ratio of these main methane isotopologues, otherwise known as the δ13C value. δ13C values typically range between −10 and −80 ‰, with abiogenic sources closer to zero and biogenic sources showing more negative values. Initially, we suggest that a δ13C difference of 10 ‰ is sufficient, in order to differentiate between methane source types, based on this we derive that a precision of 0.2 ppbv on 13CH4 retrievals may achieve the target δ13C variance. Using an application of the well-established information content analysis (ICA) technique for assumed clear-sky conditions, this paper shows that using a combination of the shortwave infrared (SWIR) bands on the planned Greenhouse gases Observing SATellite (GOSAT-2) mission, 13CH4 can be measured with sufficient information content to a precision of between 0.7 and 1.2 ppbv from a single sounding (assuming a total column average value of 19.14 ppbv), which can then be reduced to the target precision through spatial and temporal averaging techniques. We therefore suggest that GOSAT-2 can be used to differentiate between methane source types. We find that large unconstrained covariance matrices are required in order to achieve sufficient information content, while the solar zenith angle has limited impact on the information content.
    Print ISSN: 1867-1381
    Electronic ISSN: 1867-8548
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 5
    Publication Date: 2018-08-22
    Description: We present direct measurements of the summertime total reactivity of NO3 towards organic trace gases, kOTGNO3, at a rural mountain site (988 m a.s.l.) in southern Germany in 2017. The diel cycle of kOTGNO3 was strongly influenced by local meteorology with high reactivity observed during the day (values of up to 0.3 s−1) and values close to the detection limit (0.005 s−1) at night when the measurement site was in the residual layer and free troposphere. Daytime values of kOTGNO3 were sufficiently large that the loss of NO3 due to reaction with organic trace gases competed with its photolysis and reaction with NO. Within experimental uncertainty, monoterpenes and isoprene accounted for all of the measured NO3 reactivity. Averaged over the daylight hours, more than 25 % of NO3 was removed via reaction with biogenic volatile organic compounds (BVOCs), implying a significant daytime loss of NOx and the formation of organic nitrates due to NO3 chemistry. Ambient NO3 concentrations were measured on one night and were comparable to those derived from a stationary-state calculation using measured values of kOTGNO3. We present and compare the first simultaneous, direct reactivity measurements for the NO3 and OH radicals. The decoupling of the measurement site from ground-level emissions resulted in lower reactivity at night for both radicals, though the correlation between OH and NO3 reactivity was weak as would be anticipated given their divergent trends in rate constants with many organic trace gases.
    Print ISSN: 1680-7316
    Electronic ISSN: 1680-7324
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 6
    Publication Date: 2018-07-25
    Description: An operational chemical ionization mass spectrometer (CIMS) for hydroxyl radical (OH) and sulfuric acid (H2SO4) concentration measurements was adapted to include observations of OH reactivity, which is the inverse of OH lifetime, for long-term monitoring at the Global Atmosphere Watch (GAW) site Hohenpeissenberg (MOHp), Germany. OH measurement using CIMS is achieved by reacting OH with SO2, leading to the production of H2SO4, which is then detected. The adaptation for OH reactivity consists of the implementation of a second SO2 injection, at a fixed point further down flow in the sample tube to detect the OH decay caused by reactions with OH reactants present in the sample. The method can measure OH reactivity from less than 1 to 40 s−1 with the upper limit due to the fixed positioning of the second SO2 injection. To determine OH reactivity from OH concentration measurements, the reaction time between the two titration zones and OH wall losses in the sample tube need to be determined accurately through OH reactivity calibration. Potential measurement artefacts as a result of HOx recycling in the presence of NO have to be considered. Therefore, NO contamination from gases used in instrument operation must be minimized and ambient NO must be measured concurrently to determine the measurement error. This CIMS system is shown here to perform very well for OH reactivity below 15 s−1 and NO concentrations below 4 ppb, both values that are rarely exceeded at the MOHp site. Thus when deployed in suitable chemical environments, this method can provide valuable continuous long-term measurements of OH reactivity. The characterization utilizes results from chamber, laboratory and modelling studies and includes the discussion and quantification of sources of uncertainties.
    Print ISSN: 1867-1381
    Electronic ISSN: 1867-8548
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 7
    Publication Date: 2017-10-27
    Description: Hydroxyl (OH) radical reactivity (kOH) has been measured for 18 years with different measurement techniques. In order to compare the performances of instruments deployed in the field, two campaigns were conducted performing experiments in the atmospheric simulation chamber SAPHIR at Forschungszentrum Jülich in October 2015 and April 2016. Chemical conditions were chosen either to be representative of the atmosphere or to test potential limitations of instruments. All types of instruments that are currently used for atmospheric measurements were used in one of the two campaigns. The results of these campaigns demonstrate that OH reactivity can be accurately measured for a wide range of atmospherically relevant chemical conditions (e.g. water vapour, nitrogen oxides, various organic compounds) by all instruments. The precision of the measurements (limit of detection  
    Print ISSN: 1867-1381
    Electronic ISSN: 1867-8548
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 8
    Publication Date: 2018-08-17
    Description: We describe the motivation, design, and execution of the Greenhouse gAs Uk and Global Emissions (GAUGE) project. The overarching scientific objective of GAUGE was to use atmospheric data to estimate the magnitude, distribution, and uncertainty of the UK greenhouse gas (GHG, defined here as CO2, CH4, and N2O) budget, 2013–2015. To address this objective, we established a multi-year and interlinked measurement and data analysis programme, building on an established tall-tower GHG measurement network. The calibrated measurement network comprises ground-based, airborne, ship-borne, balloon-borne, and space-borne GHG sensors. Our choice of measurement technologies and measurement locations reflects the heterogeneity of UK GHG sources, which range from small point sources such as landfills to large, diffuse sources such as agriculture. Atmospheric mole fraction data collected at the tall towers and on the ships provide information on sub-continental fluxes, representing the backbone to the GAUGE network. Additional spatial and temporal details of GHG fluxes over East Anglia were inferred from data collected by a regional network. Data collected during aircraft flights were used to study the transport of GHGs on local and regional scales. We purposely integrated new sensor and platform technologies into the GAUGE network, allowing us to lay the foundations of a strengthened UK capability to verify national GHG emissions beyond the project lifetime. For example, current satellites provide sparse and seasonally uneven sampling over the UK mainly because of its geographical size and cloud cover. This situation will improve with new and future satellite instruments, e.g. measurements of CH4 from the TROPOspheric Monitoring Instrument (TROPOMI) aboard Sentinel-5P. We use global, nested, and regional atmospheric transport models and inverse methods to infer geographically resolved CO2 and CH4 fluxes. This multi-model approach allows us to study model spread in a posteriori flux estimates. These models are used to determine the relative importance of different measurements to infer the UK GHG budget. Attributing observed GHG variations to specific sources is a major challenge. Within a UK-wide spatial context we used two approaches: (1) Δ14CO2 and other relevant isotopologues (e.g. δ13CCH4) from collected air samples to quantify the contribution from fossil fuel combustion and other sources, and (2) geographical separation of individual sources, e.g. agriculture, using a high-density measurement network. Neither of these represents a definitive approach, but they will provide invaluable information about GHG source attribution when they are adopted as part of a more comprehensive, long-term national GHG measurement programme. We also conducted a number of case studies, including an instrumented landfill experiment that provided a test bed for new technologies and flux estimation methods. We anticipate that results from the GAUGE project will help inform other countries on how to use atmospheric data to quantify their nationally determined contributions to the Paris Agreement.
    Print ISSN: 1680-7316
    Electronic ISSN: 1680-7324
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 9
    Publication Date: 2017-05-22
    Description: Galvanic distortions of magnetotelluric (MT) data, such as the static-shift effect, are a known problem that can lead to incorrect estimation of resistivities and erroneous modelling of geometries with resulting misinterpretation of subsurface electrical resistivity structure. A wide variety of approaches have been proposed to account for these galvanic distortions, some depending on the target area, with varying degrees of success. The natural laboratory for our study is a hydraulically permeable volume of conductive sediment at depth, the internal resistivity structure of which can be used to estimate reservoir viability for geothermal purposes; however, static-shift correction is required in order to ensure robust and precise modelling accuracy.We present here a possible method to employ frequency–domain electromagnetic data in order to correct static-shift effects, illustrated by a case study from Northern Ireland. In our survey area, airborne frequency domain electromagnetic (FDEM) data are regionally available with high spatial density. The spatial distributions of the derived static-shift corrections are analysed and applied to the uncorrected MT data prior to inversion. Two comparative inversion models are derived, one with and one without static-shift corrections, with instructive results. As expected from the one-dimensional analogy of static-shift correction, at shallow model depths, where the structure is controlled by a single local MT site, the correction of static-shift effects leads to vertical scaling of resistivity–thickness products in the model, with the corrected model showing improved correlation to existing borehole wireline resistivity data. In turn, as these vertical scalings are effectively independent of adjacent sites, lateral resistivity distributions are also affected, with up to half a decade of resistivity variation between the models estimated at depths down to 2000 m. Simple estimation of differences in bulk porosity, derived using Archie's Law, between the two models reinforces our conclusion that the suborder of magnitude resistivity contrasts induced by the correction of static shifts correspond to similar contrasts in estimated porosities, and hence, for purposes of reservoir investigation or similar cases requiring accurate absolute resistivity estimates, galvanic distortion correction, especially static-shift correction, is essential.
    Print ISSN: 1869-9510
    Electronic ISSN: 1869-9529
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 10
    Publication Date: 2018-05-18
    Description: This research presents three case studies, through which a creative approach to developing dialogue around climate change is outlined. By working with three distinct communities and encouraging them to discuss and write poetry about how climate change affects them, we demonstrate how such an approach might be adopted at this level. By analysing the discussions and poetry that arose out of these workshops we show how this community-level approach to communicating climate change is an essential counterpart to wider-scale quantitative research. The engagement of each community with climate change is dependent on the lived experiences of their members; a failure to recognise this results in less effective communications and can also cause communities to feel isolated and helpless. By considering the individual needs and aspirations of these communities we can support effective dialogue around the topic of climate change, and in doing so can better engender positive action against the negative effects of anthropogenic climate change.
    Electronic ISSN: 2569-7439
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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