ALBERT

Description: Palaeoclimate data hold the unique promise of providing a long-term perspective on climate change and as such can serve as an important benchmark for climate models. However, palaeoclimate data have generally been archived with insufficient standardisation and metadata to allow for transparent and consistent uncertainty assessment in an automated way. Thanks to improved computation capacity, transient palaeoclimate simulations are now possible, calling for data products containing multi-parameter time series rather than information on a single parameter for a single time slice. Efforts are underway to simulate a complete glacial–interglacial cycle using general circulation models (https://www.palmod.de/, last access: 6 May 2020), and to confront these simulations with palaeoclimate data, we have compiled a multi-parameter marine palaeoclimate data synthesis that contains time series spanning 0 to 130 000 years ago. We present the first version of the data product that focuses exclusively on time series for which a robust chronology based on benthic foraminifera δ18O and radiocarbon dating is available. The product contains 896 time series of eight palaeoclimate parameters from 143 individual sites, each associated with rich metadata, age–depth model ensembles, and information to refine and update the chronologies. This version contains 205 time series of benthic foraminifera δ18O; 169 of benthic foraminifera δ13C; 131 of seawater temperature; 174 and 119 of planktonic foraminifera δ18O and δ13C; and 44, 38 and 16 of carbonate, organic carbon and biogenic silica content, respectively. The data product is available in three formats (R, LiPD and netCDF) facilitating use across different software and operating systems and can be downloaded at https://doi.org/10.1594/PANGAEA.908831 (Jonkers et al., 2019). This data descriptor presents our data synthesis strategy and describes the contents and format of the data product in detail. It ends with a set of recommendations for data archiving.

Description: We present a software toolbox that allows the efficient collection, management and maintenance of larger paleoceanographic data sets. The program combines a graphical user interface (GUI) with a simple document-based database and functionality for visualization, stratigraphy (visual alignment and radiocarbon calibration), age modelling and efficient ensemble time-series generation to create larger homogenous data compilations. Data can be imported from Excel or text files, are stored locally in netCDF format and can be easily exchanged between collaborating scientists. Within a data collection, data can be imported either to proxy-specific sub-collections or to a multi-proxy (“miscellaneous”) sub-collection that allows the import and management of any downcore data. A single age model is shared among all proxies of a core within a collection. The stand-alone software can be used with Windows and macOS and does not require web access. Installers of the current version for both Windows 10 and macOS including the C++ code can be downloaded from https://www.marum.de/Stefan-Mulitza/PaleoDataView.html (last access: 5 December 2019) along with a detailed user guide.

Description: The Amazon River transports large amounts of terrestrial organic carbon (OCterr) from the Andean and Amazon neotropical forests to the Atlantic Ocean. In order to compare the biogeochemical characteristics of OCterr in the fluvial sediments from the Amazon drainage basin and in the adjacent marine sediments, we analysed riverbed sediments from the Amazon mainstream and its main tributaries as well as marine surface sediments from the Amazon shelf and fan for total organic carbon (TOC) content, organic carbon isotopic composition (δ13CTOC), and lignin phenol compositions. TOC and lignin content exhibit positive correlations with Al ∕ Si ratios (indicative of the sediment grain size) implying that the grain size of sediment discharged by the Amazon River plays an important role in the preservation of TOC and leads to preferential preservation of lignin phenols in fine particles. Depleted δ13CTOC values (−26.1 to −29.9 ‰) in the main tributaries consistently correspond with the dominance of C3 vegetation. Ratios of syringyl to vanillyl (S ∕ V) and cinnamyl to vanillyl (C ∕ V) lignin phenols suggest that non-woody angiosperm tissues are the dominant source of lignin in the Amazon basin. Although the Amazon basin hosts a rich diversity of vascular plant types, distinct regional lignin compositions are not observed. In the marine sediments, the distribution of δ13CTOC and Λ8 (sum of eight lignin phenols in organic carbon (OC), expressed as mg/100 mg OC) values implies that OCterr discharged by the Amazon River is transported north-westward by the North Brazil Current and mostly deposited on the inner shelf. The lignin compositions in offshore sediments under the influence of the Amazon plume are consistent with the riverbed samples suggesting that processing of OCterr during offshore transport does not change the encoded source information. Therefore, the lignin compositions preserved in these offshore sediments can reliably reflect the vegetation in the Amazon River catchment. In sediments from the Amazon fan, low lignin content, relatively depleted δ13CTOC values and high (Ad ∕ Al)V ratios indicating highly degraded lignin imply that a significant fraction of the deposited OCterr is derived from petrogenic (sourced from ancient rocks) sources.

Description: Deep-sea sediments constitute a unique archive of ocean change, fueled by a permanent rain of mineral and organic remains from the surface ocean. Until now, paleo-ecological analyses of this archive have been mostly based on information from taxa leaving fossils. In theory, environmental DNA (eDNA) in the sediment has the potential to provide information on non-fossilized taxa, allowing more comprehensive interpretations of the fossil record. Yet, the process controlling the transport and deposition of eDNA onto the sediment and the extent to which it preserves the features of past oceanic biota remains unknown. Planktonic foraminifera are the ideal taxa to allow an assessment of the eDNA signal modification during deposition because their fossils are well preserved in the sediment and their morphological taxonomy is documented by DNA barcodes. Specifically, we re-analyze foraminiferal-specific metabarcodes from 31 deep-sea sediment samples, which were shown to contain a small fraction of sequences from planktonic foraminifera. We confirm that the largest portion of the metabarcode originates from benthic bottom-dwelling foraminifera, representing the in situ community, but a small portion (

Description: We present the first results of the implementation of stable water isotopes in the Massachusetts Institute of Technology general circulation model (MITgcm). The model is forced with the isotopic content of precipitation and water vapor from an atmospheric general circulation model (NCAR IsoCAM), while the fractionation during evaporation is treated explicitly in the MITgcm. Results of the equilibrium simulation under pre-industrial conditions are compared to observational data and measurements of plankton tow records (the oxygen isotopic composition of planktic foraminiferal calcite). The broad patterns and magnitude of the stable water isotopes in annual mean seawater are well captured in the model, both at the sea surface as well as in the deep ocean. However, the surface water in the Arctic Ocean is not depleted enough, due to the absence of highly depleted precipitation and snowfall. A model–data mismatch is also recognizable in the isotopic composition of the seawater–salinity relationship in midlatitudes that is mainly caused by the coarse grid resolution. Deep-ocean characteristics of the vertical water mass distribution in the Atlantic Ocean closely resemble observational data. The reconstructed δ18Oc at the sea surface shows a good agreement with measurements. However, the model–data fit is weaker when individual species are considered and deviations are most likely attributable to the habitat depth of the foraminifera. Overall, the newly developed stable water isotope package opens wide prospects for long-term simulations in a paleoclimatic context.

Description: Abrupt millennial–scale climate change events of the last deglaciation (i.e., Heinrich Stadial 1 and the Younger Dryas) were accompanied by marked increases in atmospheric CO2 presumably originated by outgassing from the Southern Ocean. However, information on the preceding Heinrich Stadials during the last glacial period is scarce. Here we present stable carbon isotopic data (δ13C) from two species of planktonic foraminifera from the western South Atlantic that reveal major decreases (up to 1 ‰) during Heinrich Stadials 3 and 2. These δ13C decreases are most likely related to millennial–scale periods of intensification in Southern Ocean deep water ventilation presumably associated with a weak Atlantic meridional overturning circulation. After reaching the upper water column of the Southern Ocean, the δ13C depletion would be transferred equatorward via central and thermocline waters. Together with other lines of evidence, our data are consistent with the hypothesis that the CO2 added to the atmosphere during abrupt millennial–scale climate change events during the last glacial period also originated in the ocean and reached the atmosphere by outgassing from the Southern Ocean. The temporal evolution of δ13C during Heinrich Stadials in our records is characterized by two relative minima separated by a relative maximum. This “w–structure” is also found in North Atlantic and South American records, giving us confidence that such structure is a pervasive feature of Heinrich Stadial 2 and, possibly, also Heinrich Stadial 3.

Description: We present the first results of the implementation of stable water isotopes in the ocean general circulation model MITgcm. The model is forced with the isotopic content of precipitation and water vapor from an atmospheric general circulation model (NCAR IsoCAM), while the fractionation during evaporation is treated explicitly in the MITgcm. Results of the equilibrium simulation under pre-industrial conditions are compared to observational data and paleoclimate records (the oxygen isotopic composition of planktic foraminiferal calcite). The broad patterns and magnitude of the stable water isotopes in annual mean seawater are well captured in the model, both at the sea surface as well as in the deep ocean. However, the surface water in the Arctic Ocean is not depleted enough, due to the absence of highly depleted precipitation and snow fall and slightly enriched river runoff. This shortcoming is also recognizable in the isotopic composition of the seawater-salinity relationship in mid-latitudes. Deep ocean characteristics of the vertical water mass distribution in the Atlantic Ocean closely resemble observational data. Apart from the systematic offset of the modeled oxygen isotopic composition of planktic foraminiferal calcite towards lower values, the comparison with proxy data shows a good agreement. We summarize that the offset is mainly caused by gametogenic calcification and a matter of choice of the applied paleotemperature equation. Overall, the newly developed stable water isotope package opens wide prospects for long-term simulations in a paleoclimatic context.

Description: Abrupt millennial-scale climate change events of the last deglaciation (i.e. Heinrich Stadial 1 and the Younger Dryas) were accompanied by marked increases in atmospheric CO2 (CO2atm) and decreases in its stable carbon isotopic ratios (δ13C), i.e. δ13CO2atm, presumably due to outgassing from the ocean. However, information on the preceding Heinrich Stadials during the last glacial period is scarce. Here we present δ13C records from two species of planktonic foraminifera from the western South Atlantic that reveal major decreases (up to 1 ‰) during Heinrich Stadials 3 and 2. These δ13C decreases are most likely related to millennial-scale periods of weakening of the Atlantic meridional overturning circulation and the consequent increase (decrease) in CO2atm (δ13CO2atm). We hypothesise two mechanisms that could account for the decreases observed in our records, namely strengthening of Southern Ocean deep-water ventilation and weakening of the biological pump. Additionally, we suggest that air–sea gas exchange could have contributed to the observed δ13C decreases. Together with other lines of evidence, our data are consistent with the hypothesis that the CO2 added to the atmosphere during abrupt millennial-scale climate change events of the last glacial period also originated in the ocean and reached the atmosphere by outgassing. The temporal evolution of δ13C during Heinrich Stadials 3 and 2 in our records is characterized by two relative minima separated by a relative maximum. This w structure is also found in North Atlantic and South American records, further suggesting that such a structure is a pervasive feature of Heinrich Stadial 2 and, possibly, also Heinrich Stadial 3.

Description: The Amazon River transports large amounts of terrestrial organic carbon (OCterr) from the Andean and Amazon neotropical forests to the Atlantic Ocean. In order to compare the biogeochemical characteristics of OCterr in the fluvial sediments from the Amazon drainage basin and in the adjacent marine sediments, we analysed riverbed sediments from the Amazon mainstream and its main tributaries as well as marine surface sediments from the Amazon shelf and fan for total organic carbon (TOC) content, organic carbon isotopic composition (δ13CTOC) and lignin phenol compositions. TOC and lignin content exhibit positive correlations with Al/Si ratios (indicative of the sediment grain size) implying that the grain size of sediment discharged by the Amazon River plays an important role in the preservation of TOC and leads to preferential preservation of lignin phenols in fine particles. Depleted δ13CTOC values (−26.1 ‰ to −29.9 ‰) in the main tributaries consistently correspond with the dominance of C3 vegetation. Ratios of syringyl to vanillyl (S/V) and cinnamyl to vanillyl (C/V) lignin phenols suggest that non-woody angiosperm tissues are the dominant source of lignin in the Amazon basin. Although the Amazon basin hosts a rich diversity of vascular plant types, distinct regional lignin compositions are not observed. In marine sediments, the distribution of δ13CTOC and Λ8 (sum of eight lignin phenols in organic carbon (OC), expressed as mg/100mg OC) values implies that OCterr discharged by the Amazon River is transported north-westward by the North Brazil Current and mostly deposited on the inner shelf. The lignin compositions in offshore sediments under the influence of the Amazon plume are consistent with the riverbed samples suggesting that processing of OCterr during offshore transport does not change the encoded source information. Therefore, the lignin compositions preserved in these offshore sediments can reliably reflect the vegetation in the Amazon River catchment. In sediments from the Amazon Fan, low lignin content, relatively depleted δ13CTOC values and high (Ad/Al)V ratios indicating highly degraded lignin imply that a significant fraction of the deposited OCterr is derived from petrogenic (sourced from ancient rocks) sources.

Description: Deep-sea sediments constitute a unique archive of ocean change, fueled by a permanent rain of mineral and organic remains from the surface ocean. Until now, paleo-ecological analyses of this archive have been mostly based on information from taxa leaving fossils. In theory, environmental DNA (eDNA) in the sediment has the potential to provide information on non-fossilized taxa, allowing more comprehensive interpretations of the fossil record. Yet, the process controlling the transport and deposition of eDNA onto the sediment and the extent to which it preserves the features of past oceanic biota remains unknown. Planktonic foraminifera are the ideal taxa to allow an assessment of the eDNA signal modification during deposition because their fossils are well preserved in the sediment and their morphological taxonomy is documented by DNA barcodes. Specifically, we re-analyze foraminiferal-specific metabarcodes from 31 deep-sea sediment samples, which were shown to contain a small fraction of sequences from planktonic foraminifera. We confirm that the largest portion of the metabarcode originates from benthic bottom-dwelling foraminifera, representing the in-situ community, but a small portion (