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  • 1
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    Optical backscattering is correlated with phytoplankton carbon across the Atlantic Ocean. (2013)
    Wiley
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    Publication Date: 2013-02-16
    Description: [1]  Phytoplankton are an important component of the oceanic carbon cycle. Yet, due to methodological constraints, the carbon biomass of phytoplankton is poorly characterised. To address this limitation, we have explored the bio-optical relationship between in-situ measurements of the particle backscattering coefficient at 470 nm, b bp (470), and the phytoplankton carbon concentration for cells with diameter less than 20  μ m (C f ). We found a significant relationship between b bp (470) and C f for Atlantic oceanic waters with chlorophyll-a concentrations less than 0.4 mg m -3 (or b bp (470) 〈 0.003 m -1 ). This relationship could be used to estimate C f from data collected by in-situ autonomous platforms and from remote sensing of ocean colour.
    Print ISSN: 0094-8276
    Electronic ISSN: 1944-8007
    Topics: Geosciences , Physics
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 2
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    Optical properties of the Dead Sea (2013)
    Wiley
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    Publication Date: 2013-02-13
    Description: [1]  The Dead Sea, located in the rift valley between Jordan and Israel, is a hypersaline lake, resulting in unique biogeochemistry and optical properties. In the spring of 2004 we conducted two days of physical and optical measurements in the lake. Because of the significant effect of dissolved salts onthe optical propertiesof water,our analysis required a novel processing approach to obtain dissolved and total inherent optical properties from the measurements. In addition, we show that the lake's salinity can be estimated from measurements of hyper-spectral absorption or attenuation spectra in the red and infrared parts of the spectrum, using published values of specific absorption of dissolved NaCl, despite the fact that the lake's salt chemistry is complex. In situ observations demonstrated that the lake has a two-layer structure with a warm and more turbid layer at the top 20-30 m and a clearer colder layer below. Both the particulate and dissolved absorption are well approximated by exponentially decreasing functions with the spectral slope of the particulate absorption about half that of the dissolved fraction and consistent with other aquatic environments. Both have relatively low and similar magnitudes in the blue (O(0.15 m -1 )). Mean particle size was observed to increase with depth consistent with precipitating salt crystals (observed in past campaigns) shown here toplay a major role in the lake's optical properties.
    Print ISSN: 0148-0227
    Topics: Geosciences , Physics
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 3
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    Bio-optical observations of the 2004 Labrador Sea phytoplankton bloom (2011)
    Wiley
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    Publication Date: 2011-11-24
    Description: A unique time series of moored bio-optical measurements documented the 2004 spring-summer bloom in the southern Labrador Sea. In situ and satellite chlorophyll data show that chlorophyll levels in the 2004 bloom were at the upper end of those typically observed in this region. Satellite chlorophyll and profiling float temperature/salinity data show that the main bloom, which typically peaks in June/July, is often preceded by ephemeral mixed layer shoaling and a lesser, short-lived bloom in May; this was the case in 2004. The particulate backscatter to beam attenuation ratio (bbp[470 nm]/Cp[660 nm]) showed peaks in the relative abundance of small particles at bloom initiation and during the decline of the bloom, while larger particles dominated during the bloom. Chlorophyll/Cp and bbp/chlorophyll were correlated with carbon export and dominated by changes in the pigment per cell associated with lower light levels due to enhanced attenuation of solar radiation during the bloom. An NPZ (nutrients, phytoplankton, zooplankton) model captured the phytoplankton bloom and an early July peak in zooplankton. Moored acoustic Doppler current profiler (ADCP) data showed an additional mid-June peak in zooplankton biomass which was attributed to egg-laying copepods. The data reported here represent one of the few moored time series of Cp, bbp and chlorophyll extending over several months in an open ocean region. Interpretation of data sets such as this will become increasingly important as these deployments become more commonplace via ocean observing systems. Moreover, these data contribute to the understanding of biological-physical coupling in a biogeochemically important, yet poorly studied region.
    Print ISSN: 0148-0227
    Topics: Geosciences , Physics
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 4
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    Observations of the sensitivity of beam attenuation to particle size in a coastal bottom boundary layer (2011)
    Wiley
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    Publication Date: 2011-02-16
    Description: The goal of this study was to test the hypothesis that the aggregated state of natural marine particles constrains the sensitivity of optical beam attenuation to particle size. An instrumented bottom tripod was deployed at the 12-m node of the Martha's Vineyard Coastal Observatory to monitor particle size distributions, particle size-versus-settling-velocity relationships, and the beam attenuation coefficient (cp) in the bottom boundary layer in September 2007. An automated in situ filtration system on the tripod collected 24 direct estimates of suspended particulate mass (SPM) during each of five deployments. On a sampling interval of 5 min, data from a Sequoia Scientific LISST 100x Type B were merged with data from a digital floc camera to generate suspended particle volume size distributions spanning diameters from approximately 2 μm to 4 cm. Diameter-dependent densities were calculated from size-versus-settling-velocity data, allowing conversion of the volume size distributions to mass distributions, which were used to estimate SPM every 5 min. Estimated SPM and measured cp from the LISST 100x were linearly correlated throughout the experiment, despite wide variations in particle size. The slope of the line, which is the ratio of cp to SPM, was 0.22 g m−2. Individual estimates of cp:SPM were between 0.2 and 0.4 g m−2 for volumetric median particle diameters ranging from 10 to 150 μm. The wide range of values in cp:SPM in the literature likely results from three factors capable of producing factor-of-two variability in the ratio: particle size, particle composition, and the finite acceptance angle of commercial beam-transmissometers.
    Print ISSN: 0148-0227
    Topics: Geosciences , Physics
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 5
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    Response to comment by S. Chiswell (2013)
    Wiley
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    Publication Date: 2013-11-28
    Description: [1]   Chiswell [2013] suggests that some of the conclusions drawn by Behrenfeld et al . [2013] are likely erroneous because of (1) the method used to calculate specific net biomass accumulation rates ( r ; d -1 ) over the seasonal cycle, (2) inconsistencies in the calculation of r and phytoplankton specific cell division rate, μ (d -1 ), and (3) uncertainties in the extrapolation of satellite data to the depth of the seasonal thermocline. Each of these concerns is addressed in the following subsections. We begin with a simple culture-based analogy that clarifies why switching between concentration-based and inventory-based expressions is required for calculating r when the mixed layer varies between shoaling and deepening conditions. This analogy is followed by a more specific mathematical treatment. We then explain why our previous comparisons between r and μ provide a conservative estimate of predator-prey coupling, followed by a discussion of uncertainties in satellite-based assessments of mixed layer phytoplankton biomass.
    Print ISSN: 0886-6236
    Electronic ISSN: 1944-9224
    Topics: Biology , Chemistry and Pharmacology , Geography , Geosciences , Physics
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 6
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    Annual cycles of ecological disturbance and recovery underlying the subarctic Atlantic spring plankton bloom (2013)
    Wiley
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    Publication Date: 2013-05-22
    Description: [1]  Satellite measurements allow global assessments of phytoplankton concentrations and, from observed temporal changes in biomass, direct access to net biomass accumulation rates ( r ). For the subarctic Atlantic basin, analysis of annual cycles in r reveal that initiation of the annual blooming-phase does not occur in spring after stratification surpasses a critical threshold, but rather in early winter when growth conditions for phytoplankton are deteriorating. This finding has been confirmed with in situ profiling float data. The objective of the current study was to test whether satellite-based annual cycles in r are reproduced by the Biogeochemical Element Cycling - Community Climate System Model and, if so, to use the additional ecosystem properties resolved by the model to better understand factors controlling phytoplankton blooms. We find that the model gives a similar early onset time for the blooming phase, that this initiation is largely due to the physical disruption of phytoplankton-grazer interactions during mixed layer deepening, and that parallel increases in phytoplankton specific division and loss rates during spring maintain the subtle disruption in food web equilibrium that ultimately yields the spring bloom climax. The link between winter mixing and bloom dynamics is illustrated by contrasting annual plankton cycles between regions with deeper and shallower mixing. We show that maximum water column inventories of phytoplankton vary in proportion to maximum winter mixing depth, implying that future reductions in winter mixing may dampen plankton cycles in the subarctic Atlantic. We propose that ecosystem disturbance-recovery sequences are a unifying property of global ocean plankton blooms.
    Print ISSN: 0886-6236
    Electronic ISSN: 1944-9224
    Topics: Biology , Chemistry and Pharmacology , Geography , Geosciences , Physics
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 7
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    Amino acid residues crucial for specificity of toxin-antitoxin interactions in the homologous Axe-Txe and YefM-YoeB complexes (2013)
    Wiley
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    Publication Date: 2013-09-25
    Print ISSN: 1742-464X
    Electronic ISSN: 1742-4658
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Published by Wiley on behalf of Federation of European Biochemical Societies.
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  • 8
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    Estimating the maritime component of aerosol optical depth and its dependency on surface wind speed using satellite data (2010)
    Copernicus
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    Publication Date: 2010-07-22
    Description: Six years (2003–2008) of satellite measurements of aerosol parameters from the Moderate Resolution Imaging Spectroradiometer (MODIS) and surface wind speeds from Quick Scatterometer (QuikSCAT), the Advanced Microwave Scanning Radiometer (AMSR-E), and the Special Sensor Microwave Imager (SSM/I), are used to provide a comprehensive perspective on the link between surface wind speed and marine aerosol optical depth over tropical and subtropical oceanic regions. A systematic comparison between the satellite derived fields in these regions allows to: (i) separate the relative contribution of wind-induced marine aerosol to the aerosol optical depth; (ii) extract an empirical linear equation linking coarse marine aerosol optical depth and wind intensity; and (iii) identify a time scale for correlating marine aerosol optical depth and surface wind speed. The contribution of wind induced marine aerosol to aerosol optical depth is found to be dominated by the coarse mode elements. When wind intensity exceeds 4 m/s, coarse marine aerosol optical depth is linearly correlated with the surface wind speed, with a remarkably consistent slope of 0.009±0.002 s/m. A detailed time scale analysis shows that the linear correlation between the fields is well kept within a 12 h time frame, while sharply decreasing when the time lag between measurements is longer. The background aerosol optical depth, associated with aerosols that are not produced in-situ through wind driven processes, can be used for estimating the contributions of terrestrial and biogenic marine aerosol to over-ocean satellite retrievals of aerosol optical depth.
    Print ISSN: 1680-7316
    Electronic ISSN: 1680-7324
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 9
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    Estimating the maritime component of aerosol optical depth and its dependency on surface wind speed using MODIS and QuikSCAT data (2010)
    Copernicus
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    Publication Date: 2010-01-29
    Description: Seven years (2002–2008) of satellite measurements from SeaWinds aboard Quick Scatterometer (QuikSCAT) and Moderate Resolution Imaging Spectroradiometer (MODIS) aboard Terra are used for providing a global view on the link between surface wind speed and marine aerosol optical depth. This study shows that away form the continents the correlation time between the surface winds and the marine aerosol exceeds 4 h and therefore the two measurements can be linked. A systematic comparison between the satellite derived fields at different locations over the World Ocean allows to: (i) separate the relative contribution of wind-induced marine aerosol to the aerosol optical depth (ii) identify a threshold wind speed for triggering maritime contribution to aerosol optical depth; and (iii) extract an empirical linear equation linking marine aerosol optical depth and wind intensity. Wind induced marine aerosol contribution to aerosol optical depth is found to be dominated by the coarse mode elements. The threshold wind speed for triggering emission of coarse maritime aerosol is remarkably consistent with an average value of 4.1±0.1 m/s. When wind intensity exceeds the threshold value, coarse mode marine aerosol optical depth is linearly correlated to the surface wind speed, with a consistent slope of 0.0082±0.0004 s/m. The background aerosol optical depth, associated with aerosols that are not produced in-situ through wind driven processes, shows relatively large seasonal and geographical variability, and can be used for estimating the contribution of terrestrial aerosols to the aerosol optical depth over the ocean.
    Electronic ISSN: 1680-7375
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 10
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    Inferring phytoplankton carbon and eco-physiological rates from diel cycles of spectral particulate beam-attenuation coefficient (2011)
    Copernicus
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    Publication Date: 2011-03-21
    Description: The diurnal fluctuations in solar irradiance impose a fundamental frequency on ocean biogeochemistry. Observations of the ocean carbon cycle at these frequencies are rare, but could be considerably expanded by measuring and interpreting the inherent optical properties. A method is presented to analyze diel cycles in particulate beam-attenuation coefficient (cp) measured at multiple wavelengths. The method is based on fitting observations with a size-structured population and optical model to infer the particle size distribution and physiologically relevant parameters of the cells responsible for the measured diel cycle in cp. Results show that the information related to size and contained in the spectral data can be exploited to independently estimate growth and loss rates during the day and night. In addition, the model can characterize the population of particles affecting the cp diel variability. Application of this method to spectral cp measured at a station in the oligotrophic Mediterranean Sea suggests that most of the observed variations in cp can be ascribed to a synchronized population of cells with an equivalent spherical diameter between 1 and 4 μm. The inferred carbon biomass of these cells was about 8–13 mg m−3 and accounted for approximately 20% of the total particulate organic carbon. If successfully validated and implemented on autonomous platforms, this method could improve our understanding of the ocean carbon cycle.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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