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  • 1
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology letters 20 (1983), S. 0 
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Abstract Bacillus sp. ATCC 21591, an alkalophilic bacterium, produces 3 enzymes associated with degradation of starch-α-amylase, pullulanase and α-glucosidase. The latter reached a maximum after 24 h growth. Highest activities of α-glucosidase and pullulanase were obtained when the initial pH of the medium was 9.7 and although at pH 10.4 highest biomass was attained after 48 h no α-glucosidase was present. The pH optimum for activity with maltose as substrate was 7.0, which is surprisingly low for an alkalophilic organism. The enzyme was substrate specific for p-nitrophenyl-α-D-glucoside, maltose and maltotriose in that order. Forty eight times the activity was located in the cell-free supernatant, relative to that found intracellulary. Transferase activity was detected - the major end-product formed from maltose was a compound with an Rf-value similar to isomaltose.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology letters 129 (1995), S. 0 
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Abstract An acetonitrile-utilising bacterium AJ270 has been isolated from soil, identified as a Rhodococcus sp. and shown to be distinct from all the recognised species of the genus. It grows well on 32 of 36 aliphatic, aromatic and hetero-aromatic nitriles tested and is capable of rapid growth on high concentrations (0.25–0.38 M) of acetonitrile, benzonitrile and 3-cyanopyridine. The nitrile hydratase of Rhodococcus AJ270 is stable on storage for 18 months at − 20° C, has activity against a very broad range of nitriles and dinitriles and is able to catalyse regio-specific and stereo-specific nitrile biotransformations. The suitability of AJ270 as a robust and versatile biocatalyst is discussed.
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  • 3
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Abstract The filamentous fungus Fusarium lateritium is cyanide tolerant, due partly to the induction of the enzyme cyanide hydratase in the presence of cyanide. This enzyme catalyses the hydration of cyanide to formamide. The expression in Escherichia coli of a cDNA clone encoding cyanide hydratase is described. The cDNA cloned was expressed as a transcriptional fusion in the expression vector pKK233-2 and a high level of activity of cyanide hydratase was detected in E. coli. Site-directed mutagenesis of the cys-163 residue inactivated the enzyme.
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  • 4
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Ground water 36 (1998), S. 0 
    ISSN: 1745-6584
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Quantitative information on dissolved gas transport in ground water aquifers is needed for a variety of site characterization and remedial design applications. The objective of this study was to gain further understanding of dissolved gas transport in the presence of trapped gas in the pore space of an otherwise water saturated porous medium, using a combination of laboratory experiments and numerical modeling. Transport experiments were conducted in a large-scale (4 × 2 × 0.2 m) laboratory physical aquifer model containing a homogeneous sandpack. Tracer (Br−) and dissolved gas (O2 or H2) plumes were created using a two-well injection/extraction scheme and then were allowed to drift in a uniform flow field. Plume locations and shapes were monitored by measuring tracer and dissolved gas concentrations as a function of position within the sandpack and tune. In all experiments, partitioning of the dissolved gases between the mobile ground water and stationary trapped gas phases resulted in substantial retardation and tailing of the dissolved O2 and H2 plumes relative to the Br− plumes. Most observed plume features could be reproduced in simulations performed with a numerical model that combined the advection-dispersion equation with diffusion controlled mass transfer of dissolved gas between the mobile aqueous and stationary trapped gas phases. Fitted values of the volumetric trapped gas content and mass transfer coefficient ranged from 0.04 to 0.08 and from 10−6to 10−5 sec−1, respectively. Sensitivity analyses were used to examine how systematic variations in these parameters would be expected to affect dissolved gas transport under a range of potential field conditions. The experimental and modeling results indicate that diffusion controlled mass transfer should be considered when predicting dissolved gas transport in ground water aquifers in the presence of trapped gas.
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  • 5
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Ground water 35 (1997), S. 0 
    ISSN: 1745-6584
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: A single-well, “push-pull” test method is proposed for the in situ determination of microbial metabolic activities in ground-water aquifers. The method consists of the pulse-type injection (“push”) of a test solution into the saturated zone of an aquifer through the screen of an existing monitoring well followed by the extraction (“pull”) of the test solution/ground-water mixture from the same well. The test solution contains a tracer and one or more reactive solutes selected to investigate specific microbial activities. During the injection phase, the test solution flows radially away from the monitoring well into the aquifer. Within the aquifer, biologically reactive components of the test solution are converted to various products by the indigenous microbial community. During the extraction phase, flow is reversed and solute concentrations are measured to obtain breakthrough curves, which are used to compute the quantities of reactant(s) consumed and/or product(s) formed during the test and reaction rates. Tests were performed to determine rates of aerobic respiration, denitrification, sulfate reduction, and methanogenesis in a petroleum contaminated aquifer in western Oregon. High rates of oxygen, nitrate, nitrite, and hydrogen utilization and nitrite, and carbon dioxide production support the hypothesis that petroleum contamination has resulted in an increase in microbial activity in the anaerobic portion of the site. The results suggest that the push-pull test method should be useful for obtaining quantitative information on a wide range of in situ microbial processes.
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  • 6
    ISSN: 1745-6584
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: An extensive series of single-well, push-pull tests was performed to quantify horizontal and vertical spatial variability in aerobic respiration and denitrification rates in a petroleum-contaminated aquifer. The results indicated rapid consumption of injected O2 or NO3− in shallow and deep test intervals across a large portion of the site. Computed first-order rate coefficients for aerobic respiration ranged from 0.15 to 1.69 h−1 in the shallow test interval, and from 0.08 to 0.83 h−1 in the deep test interval. The largest aerobic respiration rates occurred on the upgradient edge of the contaminant plume where concentrations of petroleum hydrocarbons and dissolved O2 were relatively high. Computed first-order rate coefficients for denitrification ranged from 0.09 to 0.42 h−1 in the shallow test interval, and from 0.11 to 0.28 h−1 in the deep test interval. The largest denitrification rates occurred on the downgradient edge of the plume where hydrocarbon concentrations were relatively high but dissolved oxygen concentrations were small. The rates reported here represent maximal rates of aerobic respiration and denitrification, as supported by high concentrations of electron acceptors in the injected test solutions. Production of dissolved CO2 during aerobic respiration and denitrification tests provided evidence that O2 and NO3− consumption was largely due to microbial activity. Additional evidence for microbial NO3− consumption was provided by reduced rates of NO3−consumption when dissolved O2 was injected with NO3−, and by increased N2O production when C2H2 was injected with NO3−.
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  • 7
    ISSN: 1745-6584
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: The ability to predict the transport of dissolved gases in the presence of small amounts of trapped gas in an otherwise water-saturated porous medium is needed for a variety of applications. However, an existing model based on equilibrium partitioning of dissolved gas between aqueous and trapped gas phases does not accurately predict the shape of experimentally observed breakthrough and elution curves in column experiments. The objective of this study was to develop and test a kinetic model for dissolved gas transport that combines the advection-dispersion equation with diffusion controlled mass transfer of dissolved gas between the aqueous and trapped gas phases. The model assumes one-dimensional, steady-state ground-water flow, a single dissolved gas component, and a stationary trapped gas phase with constant volume. The model contains three independent parameters: the Peclet number, P, retardation factor, R, and dimensionless mass transfer parameter, ω. The model accurately described the shape of breakthrough and elution curves for dissolved oxygen in column experiments performed with a poorly graded sand and varying amount and composition of trapped gas. Estimated values of P for the bromide tracer increased from 5.92 to 174, corresponding to a decrease in dispersivity from 5.02 to 0.17 cm, as the trapped gas volume increased from 0 to 30% of the pore space. It is speculated that this effect is due to a narrower pore size distribution (and hence more uniform pore scale velocity distribution) caused by trapped gas bubbles selectively occupying the largest pores. Estimated values of R increased from 1 to 13.6 as the trapped gas volume increased and confirmed earlier observations that even small amounts of trapped gas can significantly reduce rates of dissolved oxygen transport. Estimated values of ω ranged from 0.3 to 12.1. Although it was not possible to independently measure mass transfer coefficients or interfacial areas, values computed from flow rates and estimated w values are consistent with values computed by assuming (1) that interfacial area is proportional to trapped gas volume, (2) that trapped gas bubbles are spheres with diameters the same size as soil particles, and (3) that mass transfer is limited by diffusion of dissolved oxygen through water films surrounding trapped gas bubbles.
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  • 8
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Ground water monitoring & remediation 23 (2003), S. 0 
    ISSN: 1745-6592
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: This article describes various statistical analyses of plume-length data to evaluate the hypothesis that the presence of ethanol in gasoline may hinder the natural attenuation of hydrocarbon releases. Plume dimensions were determined for gasoline-contaminated sites to evaluate the effect of ethanol on benzene and toluene plume lengths. Data from 217 sites in Iowa (without ethanol; set 1) were compared to data from 29 sites in Kansas that were contaminated by ethanol-amended gasoline (10% ethanol by volume; set 2). The data were log-normally distributed, with mean benzene plume lengths (± standard deviation) of 193 ± 135 feet for set 1 and 263 ± 103 feet for set 2 (36% longer). The median lengths were 156 feet and 263 feet (69% longer), respectively. Mean toluene plume lengths were 185± 131 feet for set 1 and 211 ±99 feet for set 2 (14% longer), and the median lengths were 158 feet and 219 feet (39% longer), respectively. Thus, ethanol-containing BTEX plumes were significantly longer for benzene (p 〈 0.05), but not for toluene. A Wilcoxon signed rank test showed that toluene plumes were generally shorter than benzene plumes, which suggests that toluene was attenuated to a greater extent than benzene. This trend was more pronounced for set 2 (with ethanol), which may reflect that benzene attenuation is more sensitive to the depletion of electron acceptors caused by ethanol degradation. These results support the hypothesis that the presence of ethanol in gasoline can lead to longer benzene plumes. The importance of this effect, however, is probably site-specific, largely depending on the release scenario and the available electron acceptor pool.
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  • 9
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Water and environment journal 9 (1995), S. 0 
    ISSN: 1747-6593
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering
    Type of Medium: Electronic Resource
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  • 10
    ISSN: 1365-2958
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology , Medicine
    Notes: A method Is described here that can be used to identify operons whose expression Is controlled by any particular regulator protein. This method was used to Identify operons whose expression is negatively regulated by Spo0A in Bacillus subtilis. Twenty-eight strains were identified, each of which contains an operon-lacZ transcriptional fusion, negatively regulated, either directly or Indirectly, by Spo0A. In one of these strains (CSA8), the lacZ gene is fused to the argC-F operon positioned at 100° on the B. subtilis chromosome. The regulated expression of this operon by Spo0A ∼ P is mediated indirectly through the transition state regulator AbrB and is manifest only during growth on solid medium. In a second strain (CSA15), the lacZ gene is fused to an operon encoding a transport system which displays features characteristic of the ABC group of transporters, and which has a very high level of identity to the ribose transport system from Escherichia coli Expression of the ribose transport operon is directed by a single SigA-type promoter. Transcription from this promoter is repressed by the phosphorylated form of Spo0A during the late-exponential/transition phase of the growth cycle and this control is not mediated through the transition-state regulator, AbrB.
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