ALBERT

All Library Books, journals and Electronic Records Telegrafenberg

feed icon rss

Your email was sent successfully. Check your inbox.

An error occurred while sending the email. Please try again.

Proceed reservation?

Export
  • 1
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology ecology 46 (2003), S. 0 
    ISSN: 1574-6941
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: An integrated modeling framework was developed to assess physical, biological and chemical processes in the sediment and at the sediment–water interface. Special focus is laid on the description of different functional groups of bacteria as defined according to their metabolic pathways, including fermentation, methanogenesis and oxidation of high and low molecular mass dissolved organic carbon, ammonium as well as other reduced compounds. The model is subjected to a new validation method which allows for an appropriate representation of remaining uncertainties. It is also able to reproduce two-dimensional gradients in all state variables induced by a pore-water velocity field typical for permeable sediments. Another improvement with respect to many classical models follows from the simulation of adaptive changes in dormancy and motility strategies. Within an extensive analysis stage, the evolutionary stability of these strategies is investigated under a variable hydrodynamical regime. The results show that optimal behavior in terms of adhesion and readiness to dormancy shifts differ between functional groups. This pattern is compared to recent empirical findings and discussed in relation to the confidence limits of the overall methodology. In the numerical experiments, also the effect of variable microbial strategies on the total carbon mineralization of the sediment is determined.
    Type of Medium: Electronic Resource
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 2
    facet.materialart.
    Unknown
    Frontiers
    In:  Frontiers in Marine Science, 4 (Art.No. 131).
    Publication Date: 2019-02-01
    Description: Autotrophic organisms reveal an astounding flexibility in their elemental stoichiometry, with potentially major implications on biogeochemical cycles and ecological functioning. Notwithstanding, stoichiometric regulation, and co-limitation by multiple resources in autotrophs were in the past often described by heuristic formulations. In this study, we present a mechanistic model of autotroph growth, which features two major improvements over the existing schemes. First, we introduce the concept of metabolic network independence that defines the degree of phase-locking between accessory machines. Network independence is in particular suggested to be proportional to protein synthesis capability as quantified by variable intracellular N:C. Consequently, the degree of co-limitation becomes variable, contrasting with the dichotomous debate on the use of Liebig's law or the product rule, standing for constantly low and high co-limitation, respectively. Second, we resolve dynamic protein partitioning to light harvesting, carboxylation processes, and to an arbitrary number of nutrient acquisition machineries, as well as instantaneous activity regulation of nutrient uptake. For all regulatory processes we assume growth rate optimality, here extended by an explicit consideration of indirect feed-back effects. The combination of network independence and optimal regulation displays unprecedented skill in reproducing rich stoichiometric patterns collected from a large number of published chemostat experiments. This high skill indicates (1) that the current paradigm of fixed co-limitation is a critical short-coming of conventional models, and (2) that stoichiometric flexibility in autotrophs possibly reflects an optimality strategy. Numerical experiments furthermore show that regulatory mechanisms homogenize the effect of multiple stressors. Extended optimality alleviates the effect of the most limiting resource(s) while down-regulating machineries for the less limiting ones, which induces an ubiquitous response surface of growth rate over ambient resource levels. Our approach constitutes a basis for improved mechanistic understanding and modeling of acclimative processes in autotrophic organisms. It hence may serve future experimental and theoretical investigations on the role of those processes in aquatic and terrestrial ecosystems.
    Type: Article , PeerReviewed
    Format: text
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
Close ⊗
This website uses cookies and the analysis tool Matomo. More information can be found here...