ALBERT

Description: The 2015–2016 El-Niño and related ocean warming has generated significant coral bleaching and mortality worldwide. In Indonesia, the first signs of bleaching were reported in April 2016. However, this El Niño has impacted Indonesian coral reefs since 2015 through a different process than temperature-induced bleaching. In September 2015, altimetry data show that sea level was at its lowest in the past 12 years, affecting corals living in the bathymetric range exposed to unusual emersion. In March 2016, Bunaken Island (North Sulawesi) displayed up to 85 % mortality on reef flats dominated by Porites, Heliopora and Goniastrea corals with differential mortality rates by coral genus. Almost all reef flats showed evidence of mortality, representing 30 % of Bunaken reefs. For reef flat communities which were living at a depth close to the pre-El Niño mean low sea level, the fall induced substantial mortality likely by higher daily aerial exposure, at least during low tide periods. Altimetry data were used to map sea level fall throughout Indonesia, suggesting that similar mortality could be widespread for shallow reef flat communities, which accounts for a vast percent of the total extent of coral reefs in Indonesia. The altimetry historical records also suggest that such an event was not unique in the past two decades, therefore rapid sea level fall could be more important in the dynamics and resilience of Indonesian reef flat communities than previously thought. The clear link between mortality and sea level fall also calls for a refinement of the hierarchy of El Niño impacts and their consequences on coral reefs.

Description: Trichodesmium is the major nitrogen-fixing species in the western tropical South Pacific (WTSP) region, a hot spot of diazotrophy. Due to the paucity of in situ observations, remote-sensing methods for detecting Trichodesmium presence on a large scale have been investigated to assess the regional-to-global impact of this organism on primary production and carbon cycling. A number of algorithms have been developed to identify Trichodesmium surface blooms from space, but determining with confidence their accuracy has been difficult, chiefly because of the scarcity of sea-truth information at the time of satellite overpass. Here, we use a series of new cruises as well as airborne surveys over the WTSP to evaluate their ability to detect Trichodesmium surface blooms in the satellite imagery. The evaluation, performed on MODIS data at 250 m and 1 km resolution acquired over the region, shows limitations due to spatial resolution, clouds, and atmospheric correction. A new satellite-based algorithm is designed to alleviate some of these limitations, by exploiting optimally spectral features in the atmospherically corrected reflectance at 531, 645, 678, 748, and 869 nm. This algorithm outperforms former ones near clouds, limiting false positive detection and allowing regional-scale automation. Compared with observations, 80 % of the detected mats are within a 2 km range, demonstrating the good statistical skill of the new algorithm. Application to MODIS imagery acquired during the February-March 2015 OUTPACE campaign reveals the presence of surface blooms northwest and east of New Caledonia and near 20∘ S–172∘ W in qualitative agreement with measured nitrogen fixation rates. Improving Trichodesmium detection requires measuring ocean color at higher spectral and spatial (

Description: The Weather Research and Forecast model at ⅓° resolution is used to simulate the statistics of tropical cyclone (TC) activity in the present climate of the South Pacific. In addition to the large-scale conditions, the model is shown to reproduce a wide range of mesoscale convective systems. Tropical cyclones grow from the most intense of these systems formed along the South Pacific convergence zone (SPCZ) and sometimes develop into hurricanes. The three-dimensional structure of simulated tropical cyclones is in excellent agreement with dropsondes and satellite observations. The mean seasonal and spatial distributions of TC genesis and occurrence are also in good agreement with the Joint Typhoon Warning Center (JTWC) data. It is noted, however, that the spatial pattern of TC activity is shifted to the northeast because of a similar bias in the environmental forcing. Over the whole genesis area, 8.2 ± 3.5 cyclones are produced seasonally in the model, compared with 6.6 ± 3.0 in the JTWC data. Part of the interannual variability is associated with El Niño–Southern Oscillation (ENSO). ENSO-driven displacement of the SPCZ position produces a dipole pattern of correlation and results in a weaker correlation when the opposing correlations of the dipole are amalgamated over the entire South Pacific region. As a result, environmentally forced variability at the regional scale is relatively weak, that is, of comparable order to stochastic variability (±1.7 cyclones yr−1), which is estimated from a 10-yr climatological simulation. Stochastic variability appears essentially related to mesoscale interactions, which also affect TC tracks and the resulting occurrence.

Description: A numerical simulation is used to investigate the mixed layer heat balance of the tropical Pacific Ocean including the equatorial cold tongue and the region of vortices associated with tropical instability waves (TIWs). The study is motivated by a need to quantify the effects that TIWs have on the climatological heat budget of the cold tongue mixed layer; there has been some discrepancy between observations indicating very large equatorward heat transport by TIWs and models that disagree on the full three-dimensional budget. Validation of the model reveals that the TIW-induced circulation patterns are realistic but may have amplitudes about 15% weaker than those in the observations. The SST budget within tropical instabilities is first examined in a frame of reference moving with the associated tropical instability vortices (TIVs). Zonal advection of temperature anomalies and meridional advection of temperature by current anomalies dominate horizontal advection. These effects strongly heat the cold cusps and slightly cool the downwelling areas located at the leading edge of the vortices. Cooling by vertical mixing is structured at the vortex scale and almost compensates for horizontal advective heating in the cold cusps. In contrast to some previous studies, TIW-induced vertical advection is found to be negligible in the SST budget. Cooling by this term is only significant below the mixed layer. The effect of TIWs on the climatological heat budget is then investigated for the region bounded by 2°S–6°N, 160°–90°W, where instabilities are most active. TIW-induced horizontal advection leads to a warming of 0.84°C month−1, which is of the same order as the 0.77°C month−1 warming effect of atmospheric fluxes, while the mean currents and vertical mixing cool the upper ocean by −0.59°C month−1 and −1.06°C month−1, respectively. The cooling effect of TIW-induced vertical advection is also negligible in the long-term surface layer heat budget and only becomes significant below the mixed layer. The results above, and in particular the absence of cancellation between horizontal and vertical TIW-induced eddy advection, are robust in three other sensitivity experiments involving different mixing parameterizations and increased vertical resolution.

Description: Tropical instability waves and tropical instability vortices (TIVs) exert major controls on ocean dynamics, thermodynamics, and biology on intraseasonal to seasonal time scales. To understand the fundamental mechanisms at play, a Lagrangian analysis of the 3D circulation of westward-propagating TIVs was performed in a high-resolution Atlantic Ocean simulation. The model reproduces the main temperature and velocity features of the tropical Atlantic mean state and the TIVs. Lagrangian diagnostics were used to track the water masses transported in vortices and exchanged with surrounding waters. The 3D circulation within vortices is consistent with previous observations and dominated by anticyclonic rotation with downwelling and upwelling near the leading and trailing edges of the vortex, respectively. This convergent flow creates sharp gradients at the TIV southwestern edge, where vertical mixing is most efficient. While TIVs remain highly dynamically coherent throughout their lifetime, significant exchanges occur with their surroundings, with 50% of their water being renewed over one rotation cycle. A detailed investigation of the eddies’ sources and sinks reveals that they mostly transport southern water zonally, while northern waters are mostly passing through or fluxed southward in their lee. A notable source of entrained water is the Equatorial Undercurrent.

Description: Tropical cyclones drive intense ocean vertical mixing that explains most of the surface cooling observed in their wake (the “cold wake”). In this paper, the authors investigate the influence of cyclonic rainfall on the cold wake at a global scale over the 2002–09 period. For each cyclone, the cold wake intensity and accumulated rainfall are obtained from satellite data and precyclone oceanic stratification from the Global Eddy-Permitting Ocean Reanalysis (GLORYS2). The impact of precipitation on the cold wake is estimated by assuming that cooling is entirely due to vertical mixing and that an extra amount of energy (corresponding to the energy used to mix the rain layer into the ocean) would be available for mixing the ocean column in the hypothetical case with no rain. The positive buoyancy flux of rainfall reduces the mixed layer depth after the cyclone passage, hence reducing cold water entrainment. The resulting reduction in cold wake amplitude is generally small (median of 0.07 K for a median 1 K cold wake) but not negligible (〉19% for 10% of the cases). Despite similar cyclonic rainfall, the effect of rain on the cold wake is strongest in the Arabian Sea and weak in the Bay of Bengal. An analytical approach with a linearly stratified ocean allows attributing this difference to the presence of barrier layers in the Bay of Bengal. The authors also show that the cold wake is generally a “salty wake” because entrainment of subsurface saltier water overwhelms the dilution effect of rainfall. Finally, rainfall temperature has a negligible influence on the cold wake.

Description: The 2015–2016 El-Niño and related ocean warming has generated significant coral bleaching and mortality worldwide. In Indonesia, first signs of bleaching were reported in April 2016. However, this El Niño has impacted Indonesian coral reefs since 2015 through a different process than temperature-induced bleaching. In September 2015, altimetry data shows that sea level was at its lowest in the past 12 years, affecting corals living in the bathymetric range exposed to unusual emersion. In March 2016, Bunaken Island (North Sulawesi) displayed up to 85 % mortality on reef flats dominated by Porites, Heliopora and Goniastrea corals with differential mortality rates by coral genus. Almost all reef flats showed evidence of mortality, representing 30 % of Bunaken reefs. For reef flat communities which were living at a depth close to the pre-El Niño mean low sea level, the fall induced substantial mortality likely by higher daily aerial exposure a least during low tide periods. Altimetry data was used to map sea level fall throughout Indonesia, suggesting that similar mortality could be widespread for shallow reef flat communities, which accounts for a vast percent of the total extent of coral reefs in Indonesia. The altimetry historical records also suggest that such event was not unique in the past two decades, therefore rapid sea level fall could be more important in the dynamics and resilience of Indonesian reef flat communities than previously thought. The clear link between mortality and sea level fall also calls for a refinement of the hierarchy of El Niño impacts and their consequences on coral reefs.

Description: Trichodesmium is the main nitrogen-fixing species in the South Pacific region, a hotspot for diazotrophy. Due to the paucity of in situ observations, methods for detecting Trichodesmium presence on a large scale have been investigated to assess the regional-to-global impact of these species on primary production and carbon cycling. A number of satellite-derived algorithms have been developed to identify Trichodesmium surface blooms, but determining with confidence their accuracy has been difficult, chiefly because of the scarcity of sea-truth information at time of satellite overpass. Here, we use a series of new cruises as well as airborne observational surveys in the South Pacific to quantify statistically the ability of these algorithms to discern correctly Trichodesmium surface blooms in the satellite imagery. The evaluation, performed on MODIS data at 250 m and 1 km resolution acquired over the South West Pacific, shows limitations due to spatial resolution, clouds, and atmospheric correction. A new satellite-based algorithm is designed to alleviate some of these limitations, by exploiting optimally spectral features in the atmospherically corrected reflectance at 531, 645, 678, 748, and 869 nm. This algorithm outperforms former ones near clouds, limiting false positive detection, and allowing regional scale automation. Compared with observations, 80 % of the detected mats are within a 2 km range, demonstrating the good statistical skill of the new algorithm. Application to MODIS imagery acquired during the February–March 2015 OUTPACE campaign reveals the presence of surface blooms Northwest and East of New Caledonia and near 20° S–172° W in qualitative agreement with measured nitrogen fixation rates. The new algorithm, however, fails to detect sub-surface booms evidenced in trichome counts. Improving Trichodesmium detection requires measuring ocean color at higher spectral and spatial (