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  • 1
    ISSN: 1089-7550
    Source: AIP Digital Archive
    Topics: Physics
    Notes: We present a laser-target scaling model which permits approximate prediction of the dependence of ablation pressure, mechanical coupling coefficient, and related parameters in vacuum upon single-pulse laser intensity (I), wavelength (λ), and pulse width (τ) over extremely broad ranges. We show that existing data for vacuum mechanical coupling coefficient for metallic and endothermic nonmetallic, surface-absorbing planar targets follows this empirical trend to within a factor of 2 over 7 orders of magnitude in the product (Iλ(τ)1/2). The comparison we present is valid for intensity equal to or greater than the peak-coupling intensity Imax, where denseplasma formation mediates laser-target coupling. Mechanical coupling coefficients studied ranged over two orders of magnitude. The data supporting this trend represent intensities from 3 MW/cm2 to 70 TW/cm2, pulse widths from 1.5 ms to 500 ps, wavelengths from 10.6 μm to 248 nm, and pulse energies from 100 mJ to 10 kJ. With few exceptions, data approximating one-dimensional or planar expansions were selected. Previously, meaningful scaling of ablation pressure parameters with I, λ, τ was not possible because existing data concentrated in a small range of these parameters. Our own data, obtained in the low- and midrange of (Iλ(τ)1/2), completes the experimental picture. Since this new data was derived from five separate experiments with specialized character and purpose, detailed accounts of this work will appear separately. In this paper, we summarize the experimental conditions and selectonly those data which are relevant to the scaling issue. We find that laboratory-scale laser experiments can often give impulse coupling data which agree with results from much higher-energy experiments without much error, and at much lower cost. We review a theory of vacuum laser ablation, specialize it to a quantitative description of mechanical coupling, and show that the resulting model provides a simple physical description which comes quite close to the observed empirical trend. This is accomplished with minor elaborations of the theory as originally presented to account for the temperature dependence of plasma ionization states, while adhering to the premise that a simple and generally applicable treatment of laser impulse production should be available. The theoretical model can quantitatively predict vacuum ablation pressure foropaque targets without adjustable parameters to the factor-of-2 accuracy in which we are interested. Other published scaling models omit one or more of the important variables, lack broad applicability, or deviate more noticeably from the observed trend.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    [S.l.] : American Institute of Physics (AIP)
    Review of Scientific Instruments 73 (2002), S. 822-824 
    ISSN: 1089-7623
    Source: AIP Digital Archive
    Topics: Physics , Electrical Engineering, Measurement and Control Technology
    Notes: The ability to generate various ion species makes the multicusp plasma ion source an excellent candidate for maskless resistless lithography application. In this article, the mass spectra of both positive and negative ions for phosphorus, BF3, and oxygen multicusp plasmas are presented. It is shown that over 90% P+ ions are produced. The production of BF2+ and O2+ increases with increasing gas pressure, and decreases with increasing source power. With optimization of source operating parameters, approximately 85% BF2+ and over 90% O2+ have been achieved. © 2002 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Woodbury, NY : American Institute of Physics (AIP)
    Applied Physics Letters 78 (2001), S. 4145-4147 
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: The polarity of GaN films grown using GaN and AlN buffer layers on sapphire substrates by molecular beam epitaxy were investigated by atomic force microscopy, hot wet chemical etching, and reflection high-energy electron diffraction. We found that the GaN films grown on high temperature AlN (〉890 °C) and GaN (770–900 °C) buffer layers invariably show Ga and N polarity, respectively. However, the films grown using low temperature (∼500 °C) buffer layers, either GaN or AlN, could have either Ga or N polarity, depending on the growth rate of the buffer layer. © 2001 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Woodbury, NY : American Institute of Physics (AIP)
    Applied Physics Letters 80 (2002), S. 216-218 
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: The GaN films grown on buffer layers containing quantum dots by molecular beam epitaxy on sapphire substrates were investigated. The density of the dislocations in the films was determined by wet chemical etching and atomic force microscopy. It was found that the insertion of a set of multiple GaN quantum-dot layers in the buffer layer effectively reduces the density of the dislocations in the epitaxial layers. As compared to the dislocation density of ∼1010 cm−2 in the typical GaN films grown on AlN buffer layer, a density of ∼3×107 cm−2 was demonstrated in the GaN films grown with quantum dot layers. © 2002 American Institute of Physics.
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  • 5
    Electronic Resource
    Electronic Resource
    [S.l.] : American Institute of Physics (AIP)
    Journal of Applied Physics 84 (1998), S. 5893-5899 
    ISSN: 1089-7550
    Source: AIP Digital Archive
    Topics: Physics
    Notes: The photorefractive properties and the phase stability of polymer composites are dependent on the detail of the alkyl chain substituent attached to the electro-optic dye within the composite. Photorefractive composites based on poly (N-vinylcarbazole) (PVK), sensitized with trinitrofluorenone (TNF) and mixed with a concentration of 47.5 wt. % of electro-optic dye have been tested for photorefractive performance. Two alternative azo dyes of identical molecular weight have been used to produce alternative composites; both dyes were modified to suppress spatial isomerism and incorporated an eight carbon alkyl chain at the electropositive end of the chromophore: either a straight octyl chain or a branched ethylhexyl chain was substituted. The reorientational enhancement of photorefractive performance is similar in the composites resulting from these dyes. The dye with a straight octyl chain led to a composite with improved holographic performance. The dye with a branched ethylhexyl chain led to a composite exhibiting lower diffraction efficiency, but with superior phase stability. A tentative explanation is offered for these differences based on the shape of the alkyl substituent and its effect on a trapping mechanism involving the dye molecules and the sensitisor anions in PVK:TNF-based photorefractive composites. © 1998 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    Woodbury, NY : American Institute of Physics (AIP)
    Applied Physics Letters 68 (1996), S. 2801-2803 
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: We report on a high optical quality, long-life guest-host photorefractive polymer composite which exhibits a 60% device steady-state diffraction efficiency and 120 cm−1 two-beam coupling gain, well in excess of its absorption of 3.5 cm−1, at a wavelength of 676 nm. In contrast to alternative composite materials of comparable high dye content, this performance has been achieved without unacceptably compromising device lifetime or ease of fabrication and storage. This is an efficient, easily prepared and comparatively stable polymer composite with device lifetimes under storage conditions already exceeding eight months and no indication of sample degradation with repeated holographic read–write cycles. © 1996 American Institute of Physics.
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  • 7
    Publication Date: 2016-08-05
    Description: The increasing accessibility to navigation and offshore oil exploration brings risks of hydrocarbon releases in Arctic waters. Bioremediation of hydrocarbons is a promising mitigation strategy but challenges remain, particularly due to low microbial metabolic rates in cold, ice-covered seas. Hydrocarbon degradation potential of ice-associated microbes collected from the Northwest Passage was investigated. Microcosm incubations were run for 15 days at –1.7°C with and without oil to determine the effects of hydrocarbon exposure on microbial abundance, diversity and activity, and to estimate component-specific hydrocarbon loss. Diversity was assessed with automated ribosomal intergenic spacer analysis and Ion Torrent 16S rRNA gene sequencing. Bacterial activity was measured by 3 H-leucine uptake rates. After incubation, sub-ice and sea-ice communities degraded 94% and 48% of the initial hydrocarbons, respectively. Hydrocarbon exposure changed the composition of sea-ice and sub-ice communities; in sea-ice microcosms, Bacteroidetes (mainly Polaribacter ) dominated whereas in sub-ice microcosms, the contribution of Epsilonproteobacteria increased, and that of Alphaproteobacteria and Bacteroidetes decreased. Sequencing data revealed a decline in diversity and increases in Colwellia and Moritella in oil-treated microcosms. Low concentration of dissolved organic matter (DOM) in sub-ice seawater may explain higher hydrocarbon degradation when compared to sea ice, where DOM was abundant and composed of labile exopolysaccharides.
    Print ISSN: 0168-6496
    Electronic ISSN: 1574-6941
    Topics: Biology
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  • 8
    Publication Date: 2015-02-14
    Description: Many studies of human populations have used the male-specific region of the Y chromosome (MSY) as a marker, but MSY sequence variants have traditionally been subject to ascertainment bias. Also, dating of haplogroups has relied on Y-specific short tandem repeats (STRs), involving problems of mutation rate choice, and possible long-term mutation saturation. Next-generation sequencing can ascertain single nucleotide polymorphisms (SNPs) in an unbiased way, leading to phylogenies in which branch-lengths are proportional to time, and allowing the times-to-most-recent-common-ancestor (TMRCAs) of nodes to be estimated directly. Here we describe the sequencing of 3.7 Mb of MSY in each of 448 human males at a mean coverage of 51 x , yielding 13,261 high-confidence SNPs, 65.9% of which are previously unreported. The resulting phylogeny covers the majority of the known clades, provides date estimates of nodes, and constitutes a robust evolutionary framework for analyzing the history of other classes of mutation. Different clades within the tree show subtle but significant differences in branch lengths to the root. We also apply a set of 23 Y-STRs to the same samples, allowing SNP- and STR-based diversity and TMRCA estimates to be systematically compared. Ongoing purifying selection is suggested by our analysis of the phylogenetic distribution of nonsynonymous variants in 15 MSY single-copy genes.
    Print ISSN: 0737-4038
    Electronic ISSN: 1537-1719
    Topics: Biology
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  • 9
    Publication Date: 2012-06-28
    Description: Trypanosoma brucei undergoes an essential process of mitochondrial uridine insertion and deletion RNA editing catalyzed by a 20S editosome. The multiprotein mitochondrial RNA-binding complex 1 (MRB1) is emerging as an equally essential component of the trypanosome RNA editing machinery, with additional functions in gRNA and mRNA stabilization. The distinct and overlapping protein compositions of reported MRB1 complexes and diverse MRB1 functions suggest that the complex is composed of subcomplexes with RNA-dependent and independent interactions. To determine the architecture of the MRB1 complex, we performed a comprehensive yeast two-hybrid analysis of 31 reported MRB1 proteins. We also used in vivo analyses of tagged MRB1 components to confirm direct and RNA-mediated interactions. Here, we show that MRB1 contains a core complex comprised of six proteins and maintained by numerous direct interactions. The MRB1 core associates with multiple subcomplexes and proteins through RNA-enhanced or RNA-dependent interactions. These findings provide a framework for interpretation of previous functional studies and suggest that MRB1 is a dynamic complex that coordinates various aspects of mitochondrial gene regulation.
    Print ISSN: 0305-1048
    Electronic ISSN: 1362-4962
    Topics: Biology
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  • 10
    Publication Date: 2016-10-08
    Description: The West Greenland Atlantic Salmon ( Salmo salar ) fishery represents the largest remaining mixed-stock fishery for Atlantic Salmon in the Northwest Atlantic and targets multi-sea-winter (MSW) salmon from throughout North America and Europe. We evaluated stock composition of salmon harvested in the waters off West Greenland ( n = 5684 individuals) using genetic mixture analysis and individual assignment to inform conservation of North American populations, many of which are failing to meet management targets. Regional contributions to this fishery were estimated using 2169 individuals sampled throughout the fishery between 2011 and 2014. Of these, 22% were identified as European in origin. Major North American contributions were detected from Labrador (~20%), the Southern Gulf/Cape Breton (29%), and the Gaspe Peninsula (29%). Minor contributions (~5%) were detected from Newfoundland, Ungava, and Quebec regions. Region-specific catches were extrapolated using estimates of composition and fishery catch logs and harvests ranged from 300 to 600 and 2000 to 3000 individuals for minor and major constituents, respectively. To evaluate the temporal stability of the observed fishery composition, we extended the temporal coverage through the inclusion of previously published data (1995 – 2006, n = 3095) and data from archived scales (1968 – 1998, n = 420). Examination of the complete time-series (47 years) suggests relative stability in stock proportions since the late 1980s. Genetic estimates of stock composition were significantly associated with model-based estimates of returning MSW salmon (individual years r = 0.69, and overall mean r = 0.96). This work demonstrates that the analysis of both contemporary and archived samples in a mixed-stock context can disentangle levels of regional exploitation and directly inform assessment and conservation of Atlantic Salmon in the West Greenland interceptory Atlantic Salmon fishery.
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
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