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  • 2005-2009  (34)
  • 1980-1984  (13)
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  • 1
    Publication Date: 2008-10-14
    Description: Systems for protein degradation are essential for tight control of the inflammatory immune response. Autophagy, a bulk degradation system that delivers cytoplasmic constituents into autolysosomes, controls degradation of long-lived proteins, insoluble protein aggregates and invading microbes, and is suggested to be involved in the regulation of inflammation. However, the mechanism underlying the regulation of inflammatory response by autophagy is poorly understood. Here we show that Atg16L1 (autophagy-related 16-like 1), which is implicated in Crohn's disease, regulates endotoxin-induced inflammasome activation in mice. Atg16L1-deficiency disrupts the recruitment of the Atg12-Atg5 conjugate to the isolation membrane, resulting in a loss of microtubule-associated protein 1 light chain 3 (LC3) conjugation to phosphatidylethanolamine. Consequently, both autophagosome formation and degradation of long-lived proteins are severely impaired in Atg16L1-deficient cells. Following stimulation with lipopolysaccharide, a ligand for Toll-like receptor 4 (refs 8, 9), Atg16L1-deficient macrophages produce high amounts of the inflammatory cytokines IL-1beta and IL-18. In lipopolysaccharide-stimulated macrophages, Atg16L1-deficiency causes Toll/IL-1 receptor domain-containing adaptor inducing IFN-beta (TRIF)-dependent activation of caspase-1, leading to increased production of IL-1beta. Mice lacking Atg16L1 in haematopoietic cells are highly susceptible to dextran sulphate sodium-induced acute colitis, which is alleviated by injection of anti-IL-1beta and IL-18 antibodies, indicating the importance of Atg16L1 in the suppression of intestinal inflammation. These results demonstrate that Atg16L1 is an essential component of the autophagic machinery responsible for control of the endotoxin-induced inflammatory immune response.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Saitoh, Tatsuya -- Fujita, Naonobu -- Jang, Myoung Ho -- Uematsu, Satoshi -- Yang, Bo-Gie -- Satoh, Takashi -- Omori, Hiroko -- Noda, Takeshi -- Yamamoto, Naoki -- Komatsu, Masaaki -- Tanaka, Keiji -- Kawai, Taro -- Tsujimura, Tohru -- Takeuchi, Osamu -- Yoshimori, Tamotsu -- Akira, Shizuo -- AI070167/AI/NIAID NIH HHS/ -- England -- Nature. 2008 Nov 13;456(7219):264-8. doi: 10.1038/nature07383. Epub 2008 Oct 5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Host Defense, WPI Immunology Frontier Research Center, Osaka University, 3-1 Yamada-oka, Suita, Osaka 565-0871, Japan.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/18849965" target="_blank"〉PubMed〈/a〉
    Keywords: Adenine/analogs & derivatives/pharmacology ; Animals ; Autophagy/*genetics ; Carrier Proteins/*genetics ; Chimera ; Colitis/chemically induced/immunology ; Dextran Sulfate/pharmacology ; Female ; Gene Expression Regulation/*drug effects ; Interleukin-1beta/*biosynthesis/metabolism ; Lipopolysaccharides/*pharmacology ; Macrophages/*drug effects/*metabolism ; Mice ; Mice, Inbred C57BL ; Mutation
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2009-10-02
    Description: Macroautophagy is a process that leads to the bulk degradation of subcellular constituents by producing autophagosomes/autolysosomes. It is believed that Atg5 (ref. 4) and Atg7 (ref. 5) are essential genes for mammalian macroautophagy. Here we show, however, that mouse cells lacking Atg5 or Atg7 can still form autophagosomes/autolysosomes and perform autophagy-mediated protein degradation when subjected to certain stressors. Although lipidation of the microtubule-associated protein light chain 3 (LC3, also known as Map1lc3a) to form LC3-II is generally considered to be a good indicator of macroautophagy, it did not occur during the Atg5/Atg7-independent alternative process of macroautophagy. We also found that this alternative process of macroautophagy was regulated by several autophagic proteins, including Unc-51-like kinase 1 (Ulk1) and beclin 1. Unlike conventional macroautophagy, autophagosomes seemed to be generated in a Rab9-dependent manner by the fusion of isolation membranes with vesicles derived from the trans-Golgi and late endosomes. In vivo, Atg5-independent alternative macroautophagy was detected in several embryonic tissues. It also had a function in clearing mitochondria during erythroid maturation. These results indicate that mammalian macroautophagy can occur through at least two different pathways: an Atg5/Atg7-dependent conventional pathway and an Atg5/Atg7-independent alternative pathway.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Nishida, Yuya -- Arakawa, Satoko -- Fujitani, Kenji -- Yamaguchi, Hirofumi -- Mizuta, Takeshi -- Kanaseki, Toku -- Komatsu, Masaaki -- Otsu, Kinya -- Tsujimoto, Yoshihide -- Shimizu, Shigeomi -- England -- Nature. 2009 Oct 1;461(7264):654-8. doi: 10.1038/nature08455.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Pathological Cell Biology, Medical Research Institute, Tokyo Medical and Dental University, 1-5-45 Yushima, Bunkyo-ku, Tokyo 113-8510, Japan.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19794493" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Apoptosis Regulatory Proteins/metabolism ; Autophagy/drug effects/*physiology ; Etoposide/pharmacology ; Fibroblasts/cytology/drug effects/metabolism ; Food Deprivation ; Mice ; Mice, Knockout ; Microtubule-Associated Proteins/*deficiency/genetics/metabolism ; Phagosomes/drug effects/metabolism ; Phosphatidylinositol 3-Kinases/metabolism ; Protein-Serine-Threonine Kinases/metabolism ; rab GTP-Binding Proteins/metabolism
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 2009-04-03
    Description: The intracellular storage and utilization of lipids are critical to maintain cellular energy homeostasis. During nutrient deprivation, cellular lipids stored as triglycerides in lipid droplets are hydrolysed into fatty acids for energy. A second cellular response to starvation is the induction of autophagy, which delivers intracellular proteins and organelles sequestered in double-membrane vesicles (autophagosomes) to lysosomes for degradation and use as an energy source. Lipolysis and autophagy share similarities in regulation and function but are not known to be interrelated. Here we show a previously unknown function for autophagy in regulating intracellular lipid stores (macrolipophagy). Lipid droplets and autophagic components associated during nutrient deprivation, and inhibition of autophagy in cultured hepatocytes and mouse liver increased triglyceride storage in lipid droplets. This study identifies a critical function for autophagy in lipid metabolism that could have important implications for human diseases with lipid over-accumulation such as those that comprise the metabolic syndrome.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2676208/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2676208/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Singh, Rajat -- Kaushik, Susmita -- Wang, Yongjun -- Xiang, Youqing -- Novak, Inna -- Komatsu, Masaaki -- Tanaka, Keiji -- Cuervo, Ana Maria -- Czaja, Mark J -- K01 DK087776/DK/NIDDK NIH HHS/ -- P01 AG031782/AG/NIA NIH HHS/ -- P01 AG031782-01A1/AG/NIA NIH HHS/ -- P30 AG038072/AG/NIA NIH HHS/ -- R01 AG021904/AG/NIA NIH HHS/ -- R01 AG021904-07/AG/NIA NIH HHS/ -- R01 DK061498/DK/NIDDK NIH HHS/ -- R01 DK061498-05/DK/NIDDK NIH HHS/ -- England -- Nature. 2009 Apr 30;458(7242):1131-5. doi: 10.1038/nature07976. Epub 2009 Apr 1.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Medicine, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, New York 10461, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19339967" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Autophagy/drug effects/*physiology ; Cell Line ; Cholesterol/metabolism ; Dietary Fats/pharmacology ; Fatty Acids/*metabolism ; Food Deprivation ; Hepatocytes/cytology/drug effects/metabolism ; *Lipid Metabolism/drug effects ; Lipolysis/drug effects ; Liver/cytology/drug effects/metabolism ; Lysosomes/metabolism ; Mice ; Microtubule-Associated Proteins/deficiency/genetics ; Oxidation-Reduction ; Phagosomes/metabolism ; Rats ; Triglycerides/metabolism
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 4
    Publication Date: 2023-07-10
    Keywords: Aluminium oxide; Archive of Ocean Data; ARCOD; Barium; Boron; Calcium oxide; Carbon dioxide; Chromium; Cobalt; Copper; DM1402-D2; DM17; Dmitry Mendeleev; Dredge; DRG; Fluorine; Hafnium; Iron oxide, Fe2O3; Iron oxide, FeO; Lithium; Magnesium oxide; Manganese oxide; Nickel; Niobium; Philippine Sea; Phosphorus pentoxide; Potassium oxide; Rubidium; Sample code/label; Sample type; Scandium; Silicon dioxide; Sodium oxide; Strontium; Sum; Tantalum; Thorium; Titanium dioxide; Uranium; Vanadium; Water in rock; Yttrium; Zinc; Zirconium
    Type: Dataset
    Format: text/tab-separated-values, 477 data points
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  • 5
    Publication Date: 2023-07-10
    Keywords: Aluminium oxide; Archive of Ocean Data; ARCOD; Barium; Boron; Calcium oxide; Carbon dioxide; Chromium; Cobalt; Comment; Copper; DM1403-D; DM1431-D; DM17; Dmitry Mendeleev; Dredge; DRG; Elevation of event; Elevation of event 2; Event label; Fluorine; Hafnium; Iron oxide, Fe2O3; Iron oxide, FeO; Latitude of event; Latitude of event 2; Lithium; Longitude of event; Longitude of event 2; Magnesium oxide; Manganese oxide; Nickel; Niobium; Philippine Sea; Phosphorus pentoxide; Potassium oxide; Rubidium; Sample code/label; Sample type; Scandium; Silicon dioxide; Sodium oxide; Strontium; Sum; Tantalum; Thorium; Titanium dioxide; Uranium; Vanadium; Water in rock; Yttrium; Zinc; Zirconium
    Type: Dataset
    Format: text/tab-separated-values, 205 data points
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  • 6
    Publication Date: 2023-07-10
    Keywords: Aluminium oxide; Archive of Ocean Data; ARCOD; Barium; Boron; Calcium oxide; Carbon dioxide; Chromium; Cobalt; Copper; DM1404-D; DM17; Dmitry Mendeleev; Dredge; DRG; Fluorine; Hafnium; Iron oxide, Fe2O3; Iron oxide, FeO; Lithium; Loss on ignition; Magnesium oxide; Manganese oxide; Nickel; Niobium; Philippine Sea; Phosphorus pentoxide; Potassium oxide; Rubidium; Sample code/label; Sample type; Scandium; Silicon dioxide; Sodium oxide; Strontium; Sum; Tantalum; Thorium; Titanium dioxide; Uranium; Vanadium; Water in rock; Yttrium; Zinc; Zirconium
    Type: Dataset
    Format: text/tab-separated-values, 485 data points
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  • 7
    Publication Date: 2023-07-10
    Keywords: Aluminium oxide; Archive of Ocean Data; ARCOD; Barium; Boron; Calcium oxide; Carbon dioxide; Chromium; Cobalt; Copper; DM1398-D; DM17; Dmitry Mendeleev; Dredge; DRG; Fluorine; Hafnium; Iron oxide, Fe2O3; Iron oxide, FeO; Lithium; Loss on ignition; Magnesium oxide; Manganese oxide; Nickel; Niobium; Philippine Sea; Phosphorus pentoxide; Potassium oxide; Rubidium; Sample code/label; Sample type; Scandium; Silicon dioxide; Sodium oxide; Strontium; Sum; Tantalum; Thorium; Titanium dioxide; Uranium; Vanadium; Water in rock; Yttrium; Zinc; Zirconium
    Type: Dataset
    Format: text/tab-separated-values, 257 data points
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  • 8
    Electronic Resource
    Electronic Resource
    Springer
    Marine biology 66 (1982), S. 199-205 
    ISSN: 1432-1793
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The entire process of development from eggs to juveniles was observed in the sea-star Ctenopleura fisheri Hayashi. The breeding season of this sea-star in Toyama Bay, the Sea of Japan, occurs in the winter. The eggs are 465 μ in diameter, semitranslucent and pale brown in color. They develop into a barrel-shaped larva, neither bipinnaria nor brachiolaria, through a wrinkled blastula stage by holoblastic, radial cleavage. Larvae are free-swimming and do not feed during the larval stage. At metamorphosis the stalk, a larval organ, disappears by one of either 2 different processes; absorption into future body of the juveniles, or rupture and collapse. Fifteen days after insemination, metamorphosis is completed and the resulting juveniles, about 1 000 μm in diameter, bear 2 pairs of tube-feet and a terminal tentacle in each arm.
    Type of Medium: Electronic Resource
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  • 9
    ISSN: 1432-1203
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary In our study, we found a recognizable pattern of the midface in three retinoblastoma patients with interstitial deletion of chromosome 13 in lymphocytes. Further photographs of patients reported by other authors confirmed our conclusion that the midface in children with interstitial deletion of 13q from q12 to q22, always involving q14, is characterized by prominent eyebrows, broad nasal bridge, bulbous tip of the nose, a large mouth with a thin upper lip, and a long philtrum. This midface pattern could not be recognized in patients with normal karyotypes, suggesting that the critical segment for the midface phenotype as well as for retinoblastoma may exist in band 13q14.
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    Springer
    Human genetics 〈Berlin〉 64 (1983), S. 205-205 
    ISSN: 1432-1203
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Type of Medium: Electronic Resource
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