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  • Saccharomyces cerevisiae  (4)
  • Chemistry  (3)
  • Earth model, also for more shallow analyses !  (1)
  • Malate synthase
  • Lactobacillus delbrueckii subsp. lactis
  • 1995-1999  (6)
  • 1985-1989  (4)
  • 1
    Electronic Resource
    Electronic Resource
    Influence of gene dosage and autoregulation of the regulatory genes INO2 and INO4 on inositol/choline-repressible gene transcription in the yeast Saccharomyces cerevisiae (1997)
    Springer
    Current genetics 31 (1997), S. 462-468 
    Details
    ISSN: 1432-0983
    Keywords: Key words Transcriptional regulation ; Phospholipid biosynthesis ; Saccharomyces cerevisiae ; INO2
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Expression of structural genes of phospholipid biosynthesis in yeast is mediated by the inositol/choline-responsive element (ICRE). ICRE-dependent gene activation, requiring the regulatory genes INO2 and INO4, is repressed in the presence of the phospholipid precursors inositol and choline. INO2 and, to a less extent, INO4 are positively autoregulated by functional ICRE sequences in the respective upstream regions. However, an INO2 allele devoid of its ICRE functionally complemented an ino2 mutation and completely restored inositol/choline regulation of Ino2p-dependent reporter genes. Low-level expression of INO2 and INO4 genes, each under control of the heterologous MET25 promoter, did not alter the regulatory pattern of target genes. Thus, upstream regions of INO2 and INO4 are not crucial for transcriptional control of ICRE-dependent genes by inositol and choline. Interestingly, over-expression of INO2, but not of INO4, counteracted repression by phospholipid precursors. Possibly, a functional antagonism between INO2 and a negative regulator is the key event responsible for repression or de-repression.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s002940050231
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  • 2
    Electronic Resource
    Electronic Resource
    Constitutive and carbon source-responsive promoter elements are involved in the regulated expression of the Saccharomyces cerevisiae malate synthase gene MLS1 (1997)
    Springer
    Molecular genetics and genomics 255 (1997), S. 619-627 
    Details
    ISSN: 1617-4623
    Keywords: Key wordsSaccharomyces cerevisiae ; Gluconeogenesis ; Malate synthase ; Transcriptional regulation ; MLS1
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The malate synthase gene, MLS1, of the yeast Saccharomyces cerevisiae is transcriptionally regulated by the carbon source in the growth medium. A MLS1-lacZ fusion gene, expressed at a basal level in the presence of 2% glucose, is derepressed more than 100-fold under conditions of sugar limitation. No evidence for MLS1 induction by oleic acid was found. By deletion analysis of the MLS1 control region, we identified two sites, UAS1 and UAS2, as important for efficient derepression of the gene. Both sites contain sequences that resemble the previously characterized carbon source-responsive element (CSRE) found in the promoter of the isocitrate lyase gene ICL1. Indeed, UAS1 and UAS2 in the MLS1 upstream region turn out to be functional CSRE sequence variants. This finding allowed us to define a modified version of the CSRE consensus sequence (CCRTYSRNCCG). Protein binding to UAS1MLS1 was observed with extracts from derepressed but not from repressed cells, and could be competed for by an excess of the unlabelled CSRE(ICL1) sequence. No competition was observed with a mutated CSRE variant. Site-directed mutagenesis of both CSREs in the MLS1 promoter reduced gene activation under derepressing conditions to 20% of the wild-type level. The same decrease was observed with the wild-type MLS1 promoter in a cat8 mutant, lacking an activator of CSRE-dependent transcription. The CSRE/Cat8p-independent activation of MLS1 is mediated by constitutive UAS elements. The pleiotropic transcription factor Abf1p, which binds to the MLS1 upstream region, may contribute to constitutive activation. Thus, in order to ensure the severe glucose repression of MLS1 observed, repressor elements that respond to the carbon source must counteract constitutive activation. In summary, ICL1 and MLS1 share common cis-acting elements, although a distinct mechanism of carbon source control also contributes to MLS1 regulation.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s004380050536
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  • 3
    Electronic Resource
    Electronic Resource
    Putative target sites for mobile G+C rich clusters in yeast mitochondrial DNA: Single elements and tandem arrays (1989)
    Springer
    Molecular genetics and genomics 218 (1989), S. 272-283 
    Details
    ISSN: 1617-4623
    Keywords: GC clusters ; Mobile elements ; Target sites ; mtDNA ; Saccharomyces cerevisiae
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary GC clusters constitute the major repetitive elements in the mitochondrial (mt) genome of the yeast Saccharomyces cerevisiae. Many of these clusters are optional and thus contribute much to the polymorphism of yeast mtDNAs. We have made a systematic search for polymorphic sites by comparing mtDNA sequences of various yeast strains. Most of the 26 di- or polymorphic sites found differ by the presence or absence of a GC cluster of the majority class, here referred to as the M class, which terminate with an AGGAG motif. Comparison of sequences with and without the GC clusters reveal that elements of the subclasses M1 and M2 are inserted 3′ to a TAG, flanked by A+T rich sequences. M3 elements, in contrast, only occur in tandem arrays of two to four GC clusters; they are consistently inserted 3′ to the AGGAG terminal sequence of a preexisting cluster. The TAG or the terminal AGGAG, therefore, are regarded as being part of the target sites for M1 and M2 or M3 elements, respectively. The dinucleotide AG is in common to both target sites; it also occurs at the 3′ terminus (AGGAG). This suggests its duplication during GC cluster insertion. This notion is supported by the observation that GC clusters of the minor classes G and V similarily repeat at their 3′ terminus a GT or an AA dinucleotide, respectively, from their putative target sites.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00331278
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  • 4
    Electronic Resource
    Electronic Resource
    Isolation and expression analysis of two yeast regulatory genes involved in the derepression of glucose-repressible enzymes (1987)
    Springer
    Molecular genetics and genomics 209 (1987), S. 366-373 
    Details
    ISSN: 1617-4623
    Keywords: Glucose repression ; Glucose derepression ; Regulatory genes ; Expression analysis ; Saccharomyces cerevisiae
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Yeast strains carrying one of the two regulatory mutations cat1 and cat3 are defectve in derepression of several glucose-repressible enzymes that are necessary for utilizing non-fermentable carbon sources. Hence, these strains fail to grow on ethanol, glycerol or acetate. The synthesis of isocitrate lyase, malate synthase, malate dehydrogenase and fructose-1,6-bisphosphatase is strongly affected in cat1 and cat3 strains. Genes CAT1 and CAT3 have been isolated by complementation of the cognate, mutations after transformation with an episomal plasmid gene library. The restriction map of CAT1 proved its allelism to the earlier isolated SNF1 gene. Both genes appear to exist as single-copy genes per haploid genome as indicated by Southern hybridization. Northern analysis has shown that the 1.35 kb CAT3 mRNA is constitutively expressed, independent of the carbon source in the medium. Derepression studies with CAT3 transformants using a multi-copy plasmid showed over-expression of glyoxylate cycle enzymes. This result would be consistent with a direct effector function for the CAT3 gene product.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00329667
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  • 5
    Electronic Resource
    Electronic Resource
    Cloning and DNA sequence analysis of pepQ, a prolidase gene from Lactobacillus delbrueckii subsp. lactis DSM7290 and partial characterization of its product (1995)
    Springer
    Molecular genetics and genomics 247 (1995), S. 494-500 
    Details
    ISSN: 1617-4623
    Keywords: Prolidase ; Metalloprotease ; Lactobacillus delbrueckii subsp. lactis ; Nucleotide sequence analysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract From a genomic library of Lactobacillus delbrueckii subsp. lactis (DSM7290) DNA, in the low-copy-number vector pLG339, a recombinant clone was selected, which complemented a mutation in the prolidase gene (pepQ) of Escherichia coli UK173. Nucleotide sequence analysis revealed an open reading frame of 1104 nucleotides corresponding to a protein of 368 amino acids with a calculated pI of 4.64 and a molecular mass of 41087 Da. The start site of pepQ transcription was determined by primer extension analysis with mRNA prepared from L. delbrueckii. Based on homology of the gene product to various peptidases and on the substrate specificity determined, the peptidase was designated PepQ. The influence of various protease inhibitors and cations on peptidase activity indicated that PepQ is a metalloprotease. The absence of a membrane-spanning domain and a signal peptide sequence argues for a cytoplasmic localization of the enzyme.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00293152
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  • 6
    Electronic Resource
    Electronic Resource
    Fabrication of glassy carbon microstructures by pyrolysis of microfabricated polymeric precursorsThis work has been supported in part by the Office of Naval Research and the Defense Advanced Research Projects Agency. It used MRSEC Shared Facilities supported by the National Science Foundation (DMR-9400396). The authors thank Xiao-Mei Zhao for demonstrating microtransfer molding. (1997)
    Weinheim : Wiley-Blackwell
    Advanced Materials 9 (1997), S. 477-480 
    Details
    ISSN: 0935-9648
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Additional Material: 4 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/adma.19970090604
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  • 7
    Electronic Resource
    Electronic Resource
    Bausteine von Oligosacchariden, LXXVIII. Synthese von KDO-haltigen Lipoid-A-Analoga (1987)
    Weinheim : Wiley-Blackwell
    Liebigs Annalen 1987 (1987), S. 249-258 
    Details
    ISSN: 0170-2041
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Building Units of Oligosaccharides, LXXVIII. - Synthesis of KDO-Containing Lipid A AnaloguesThe non-neighbouring group supported glycosidation of 12 with the suitably protected glycosyl bromide 9 of 2-azido-2-deoxy-D-glucose leads - in the presence of a heterogeneous silver catalyst - to the formation of the β-(1→6)-glycosidically linked disaccharide 14. It consists of two 2-azido-2-deoxy-D-glucose units. Partial deblocking of 14 furnishes 15. On glycosidation with KDO bromide this compound yields the trisaccharide 16, which contains a KDO unit in an α-(2→6) ketosidic bond. Reduction of the two azido groups followed by amidation with (R)-3-hydroxymyristic acid and further deblocking generates the trisaccharide α-KDO-(2→6)-β-D-GlcA-(1→6)-D-GlcA 20 with two 3-hydroxy fatty acid residues in an amidic linkage.
    Notes: Die Umsetzung des Pyranosylbromids 9 der 2-Azido-2-desoxy-D-glucose mit dem Akzeptor 12 führt bei Gegenwart eines heterogenen Silberkatalysators ohne Nachbargruppenbeteiligung unter Inversion zum β-(1→6)-glycosidisch verknüpften Disaccharid 14 aus zwei 2-Azido-2-desoxy-D-glucose-Einheiten. Nach partieller Entblockierung zu 15 ist die Anknüpfung eines KDO-Restes unter Bildung einer α-(2→6)-ketosidischen Bindung zum Trisaccharid 16 möglich. Nach Reduktion der Azidogruppen und Anknüpfung von (R)-3-Hydroxymyristinsäure-Resten gelangt man nach Entblockierung zum Trisaccharid α-KDO-(2→6)-β-D-GlcA-(1→6)-D-GlcA 20, das amidartig zwei 3-Hydroxyfettsäure-Reste gebunden enthält.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/jlac.198719870316
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  • 8
    Electronic Resource
    Electronic Resource
    A search in the genome of Saccharomyces cerevisiae for genes regulated via stress response elements (1998)
    New York, NY [u.a.] : Wiley-Blackwell
    Yeast 14 (1998), S. 1041-1050 
    Details
    ISSN: 0749-503X
    Keywords: Saccharomyces cerevisiae ; STRE ; stress response ; genomics ; bioinformatics ; Life and Medical Sciences ; Genetics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology
    Notes: Stress response elements (STREs, core consensus AG4 or C4T) have been demonstrated previously to occur in the upstream region of a number of genes responsive to induction by a variety of stress signals. This stress response is mediated by the homologous transcription factors Msn2p and Msn4p, which bind specifically to STREs. Double mutants (msn2 msn4) deficient in these transcription factors have been shown to be hypersensitive to severe stress conditions. To obtain a more representative overview of the set of yeast genes controlled via this regulon, a computer search of the Saccharomyces cerevisiae genome was carried out for genes, which, similar to most known STRE-controlled genes, exhibit at least two STREs in their upstream region. In addition to the great majority of genes previously known to be controlled via STREs, 69 open reading-frames were detected. Expression patterns of a set of these were examined by grid filter hybridization, and 14 genes were examined by Northern analysis. Comparison of the expression patterns of these genes demonstrates that they are all STRE-controlled although their detailed expression patterns differ considerably. © 1998 John Wiley & Sons, Ltd.
    Additional Material: 2 Ill.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Verzweigte und kettenverlängerte Zucker, XXX. Diastereoselektive Synthese von L-glycero-D-manno-Heptose, einem Baustein der inneren Core-Region von Lipopolysacchariden (1986)
    Weinheim : Wiley-Blackwell
    Liebigs Annalen 1986 (1986), S. 675-686 
    Details
    ISSN: 0170-2041
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Branched and Chain-extended Sugars, XXX.  -  Diastereoselective Synthesis of L-glycero-D-manno-Heptose, a Constituent of the Inner Core Region of LipopolysaccharidesReaction of 2,3;5,6-di-O-isopropylidene-D-mannofuranose (1) with 2-lithio-1,3-dithiane affords diastereoselectively the 3,4;6,7-di-O-isopropylidene-D-glycero-D-galacto-heptose trimethylene dithioacetal (3). Conversion of compound 3 by a sequence of steps gives the tri-O-isopropylidene-D-glycero-D-galacto-heptit 16 which is oxidized with 1,1′-(azodicarbonyl)-dipiperidine to give the tri-O-isopropylidene-L-glycero-D-manno-heptose 17. Finally, compound 17 is transferred via the acetate 19 into the L-glycero-D-manno-heptopyranose 18.
    Notes: 2,3;5,6-Di-O-isopropyliden-D-mannofuranose (1) reagiert diastereoselektiv mit 2-Lithio-1,3-dithian zum 3,4;6,7-Di-O-isopropyliden-D-glycero-D-galacto-heptose-trimethylendithioacetal (3). Nach Umwandlung von 3 über eine Reihe von Zwischenstufen zum Tri-O-isopropyliden-D-glycero-D-galacto-heptit 16 läßt sich dieser mit 1,1′-(Azodicarbonyl)dipiperidin zur Tri-O-isopropyliden-L-glycero-D-manno-heptose 17 oxidieren. Hieraus ist über das Acetat 19 die freie L-glycero-D-manno-heptopyranose 18 zu gewinnen.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/jlac.198619860409
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  • 10
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    Unknown
    Crustal and uppermost mantle velocity structure of northern Eurasia along the profile Quartz (1997)
    In:  Bull. Seism. Soc. Am., Wiesbaden, Franz Steiner Verlag GmbH, vol. 87, no. 2, pp. 414-426, pp. L10308, (ISSN: 1340-4202)
    Details
    Publication Date: 1997
    Keywords: Earth model, also for more shallow analyses ! ; Velocity depth profile ; EUROPROBE (Geol. and Geophys. in eastern Europe) ; Deep seismic sounding (espec. cont. crust) ; BSSA
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    BIBLIOGRAPHY SEISMOLOGY
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