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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Algorithmica 25 (1999), S. 176-195 
    ISSN: 1432-0541
    Keywords: Key words. Evolutionary trees, Approximation algorithms, Lower bounds.
    Source: Springer Online Journal Archives 1860-2000
    Topics: Computer Science , Mathematics
    Notes: Abstract. Different phylogenetic trees for the same group of species are often produced either by procedures that use diverse optimality criteria [16] or from different genes [12] in the study of molecular evolution. Comparing these trees to find their similarities and dissimilarities (i.e., distance ) is thus an important issue in computational molecular biology. Several distance metrics including the nearest neighbor interchange (nni) distance and the subtree-transfer distance have been proposed and extensively studied in the literature. This article considers a natural extension of the subtree-transfer distance, called the linear-cost subtree-transfer distance, and studies the complexity and efficient approximation algorithms for this distance as well as its relationship to the nni distance. The linear-cost subtree-transfer model seems more suitable than the (unit-cost) subtree-transfer model in some applications. The following is a list of our results: 1. The linear-cost subtree-transfer distance is in fact identical to the nni distance on unweighted phylogenies. 2. There is an algorithm to compute an optimal linear-cost subtree-transfer sequence between unweighted phylogenies in O(n ⋅ 2 O(d) ) time, where d denotes the linear-cost subtree-transfer distance. Such an algorithm is useful when d is small. 3. Computing the linear-cost subtree-transfer distance between two weighted phylogenetic trees is NP-hard, provided we allow multiple leaves of a tree to share the same label (i.e., the trees are not necessarily uniquely labeled). 4. There is an efficient approximation algorithm for computing the linear-cost subtree-transfer distance between weighted phylogenies with performance ratio 2 .
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Algorithmica 19 (1997), S. 354-368 
    ISSN: 1432-0541
    Keywords: Key words. Parallel algorithms, Maximal acyclic sets, Planar graphs.
    Source: Springer Online Journal Archives 1860-2000
    Topics: Computer Science , Mathematics
    Notes: Abstract. Given a graph G=(V,E), the well-known spanning forest problem of G can be viewed as the problem of finding a maximal subset F of edges in G such that the subgraph induced by F is acyclic. Although this problem has well-known efficient NC algorithms, its vertex counterpart, the problem of finding a maximal subset U of vertices in G such that the subgraph induced by U is acyclic, has not been shown to be in NC (or even in RNC) and is not believed to be parallelizable in general. In this paper we present NC algorithms for solving the latter problem for two special cases. First, we show that, for a planar graph with n vertices, the problem can be solved in $O(\log^3 n)$ time with O(n) processors on an EREW PRAM. Second, we show that the problem is solvable in NC if the input graph G has only vertex-induced paths of length polylogarithmic in the number of vertices of G. As a consequence of this result, we show that certain natural extensions of the well-studied maximal independent set problem remain solvable in NC. Moreover, we show that, for a constant-degree graph with n vertices, the problem can be solved in $O(\sqrt{n}\log^3n)$ time with O(n 2 ) processors on an EREW PRAM.
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  • 3
    Electronic Resource
    Electronic Resource
    [S.l.] : American Institute of Physics (AIP)
    Journal of Applied Physics 78 (1995), S. 2126-2128 
    ISSN: 1089-7550
    Source: AIP Digital Archive
    Topics: Physics
    Notes: Lattice-matched p-doped GaAs–Ga0.51In0.49P quantum well intersub-band photodetectors with three different well widths have been grown on GaAs substrates by metal-organic chemical-vapor deposition and fabricated into mesa structures. The photoresponse cutoff wavelength varies between 3.5 and 5.5 μm by decreasing the well width from 50 down to 25 A(ring). Dark current measurements as a function of temperature reveal activation energies for thermionic emission that closely correspond to measured cutoff wavelengths. Experimental results are in reasonable agreement with Kronig–Penney calculations. © 1995 American Institute of Physics.
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  • 4
    Electronic Resource
    Electronic Resource
    [S.l.] : American Institute of Physics (AIP)
    Journal of Applied Physics 77 (1995), S. 438-440 
    ISSN: 1089-7550
    Source: AIP Digital Archive
    Topics: Physics
    Notes: Thin films of Y-Ba-Cu-O of different composition were grown on MgO and LaAlO3 substrates by metal-organic chemical-vapor deposition. Using a microwave cavity resonator, their microwave surface resistance at 24.5 GHz was measured at a temperature of 77.5 K. It varies from less than 3 mΩ to more than 50 mΩ depending on the composition of the films. The lowest surface resistances could be obtained with samples having a composition close to the ideal stoichiometry 1:2:3 but with a slight excess of copper and yttrium. © 1995 American Institute of Physics.
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  • 5
    Electronic Resource
    Electronic Resource
    [S.l.] : American Institute of Physics (AIP)
    Physics of Fluids 8 (1996), S. 2263-2265 
    ISSN: 1089-7666
    Source: AIP Digital Archive
    Topics: Physics
    Notes: The merging of two identical vortices is studied numerically using a spectral code. It is noted that the enstrophy cascade is most active on the distorted vortex boundaries, with a Kolmogorov-like spectrum E(k)≈k−α, α≤4, developed at high wave numbers. The inverse energy cascade is completed when the vortices merge into one of larger size. © 1996 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    Woodbury, NY : American Institute of Physics (AIP)
    Applied Physics Letters 66 (1995), S. 3251-3253 
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: The optimized structure for the InGaAsP/GaAs quaternary material lasers (λ=0.808 μm) is investigated for the most efficient high-power operation through an experiment and theoretical study. A comparative study is performed of threshold current density Jth and differential efficiency ηd dependence on cavity length (L) for two different laser structures with different active layer thickness (150 and 300 A(ring)) as well as for laser structures with different multiple quantum well structures. A theoretical model with a more accurate formulation for minority leakage phenomenon provides explanation for the experimental results and sets general optimization rules for other lasers with similar restrictions on the band gap and refractive index difference between the active layer and the cladding layers. © 1995 American Institute of Physics.
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  • 7
    Electronic Resource
    Electronic Resource
    Woodbury, NY : American Institute of Physics (AIP)
    Applied Physics Letters 70 (1997), S. 214-216 
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: We report measurements of electron transfer in real space in GaAs/AlxGa1−xAs asymmetric double quantum wells under an electric field by far-infrared cyclotron resonance (CR). Due to nonparabolicity, the asymmetric quantum structure results in well-resolved CR lines, which allow contactless measurements of the electron density in each well. Our results show that electrons tunnel through the barrier from one well to the other at the level anticrossing of their ground states. © 1997 American Institute of Physics.
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  • 8
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: An experimental and theoretical study on temperature dependence of the threshold current density Jth and differential efficiency ηd for the InGaAsP/GaAs laser diodes emitting at λ=0.8 μm was performed. Threshold current density Jth increases and differential efficiency ηd decreases as temperature is increased mainly because of thermal broadening of the gain spectrum. However, the measured temperature dependence of Jth and ηd could not be explained when only this effect was considered. In this letter, the temperature dependence of momentum relaxation rate (h-dash-bar)/τ of carriers was investigated by performing the photoluminescence study. At high temperature, increase of the momentum relaxation rate (h-dash-bar)/τ leads to reduction of the gain and mobility and increase of the optical loss, causing higher Jth and lower ηd as experimentally observed. The resulting theoretical model provides a good explanation for the mechanism of the increase of Jth and decrease of ηd. © 1995 American Institute of Physics.
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  • 9
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: Diamondlike carbon (DLC) was deposited on silicon using a plasma immersion ion deposition (PIID) method. Inductive radio-frequency plasma sources were used to generate Ar and C2H2 plasmas at low gas pressures ranging from 0.04 to 0.93 Pa. The film stress and hardness were sharply dependent upon bias voltage at an operating pressure of 0.04 Pa. A maximum hardness of 30 GPa and compressive stress of 9 GPa was observed at a pulsed bias of −150 V bias (carbon energy of 80 eV). The mechanical properties of DLC films are correlated with UV Raman peak positions which infer sp3-bonded carbon contents. © 1998 American Institute of Physics.
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  • 10
    Electronic Resource
    Electronic Resource
    Woodbury, NY : American Institute of Physics (AIP)
    Applied Physics Letters 69 (1996), S. 614-616 
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: Two incident ultrasonic shear wave beams of 7.5 MHz interact at glass-metal interface, and the reflected longitudinal wave of 15 MHz normal to the interface are investigated. This effect is identified as a nonlinear interface effect and the sum frequency signal is the convolution of two input signals. The convolution efficiency is measured as about 106 dBm for glass-iron interface. The observation reveals that the quality of interface bonding has a significant influence on the convolution output. So the nonlinear effect is found to be useful for implementation of convolution or nondestructive evaluation of bonding layer. Theoretical analysis and experimental measurements on the effect are presented in this letter. © 1996 American Institute of Physics.
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