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  • 1
    Publication Date: 2015-07-01
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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  • 2
    Publication Date: 2019-07-16
    Description: A suite of standard ocean hydrographic and circulation metrics are applied to the equilibrium physical solutions from thirteen global carbon models participating in phase 2 of the Ocean Carbon-cycle Model Intercomparison Project (OCMIP-2). Model-data comparisons are presented for sea surface temperature and salinity, seasonal mixed layer depth, meridional heat and freshwater transport, 3-D hydrographic fields, and meridional overturning. Considerable variation exists among the OCMIP-2 simulations, with some of the solutions falling noticeably outside available observational constraints. For some cases, model-model and model-data differences can be related to variations in surface forcing, sub-grid scale parameterizations, and model architecture. These errors in the physical metrics point to significant problems in the underlying model representations of ocean transport and dynamics, problems that directly propagate into the OCMIP predicted ocean tracer and carbon cycle variables (e.g., air-sea CO2 flux; chlorofluorocarbon and anthropogenic CO2 uptake; export production). The substantial model-model ranges in OCMIP-2 biogeochemical fields (±25-40%), therefore, likely overestimate the uncertainties in ocean carbon cycle dynamics due to large-scale physical circulation.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 3
    Publication Date: 2019-07-16
    Description: New radiocarbon and chlorofluorocarbon-11 data from the World Ocean Circulation Experiment are used to assess a suite of 19 ocean carbon cycle models. We use the distributions and inventories of these tracers as quantitative metrics of model skill and find that only about a quarter of the suite is consistent with the new data-based metrics. This should serve as a warning bell to the larger community that not all is well with current generation of ocean carbon cycle models. At the same time, this highlights the danger in simply using the available models to represent the state-of-the-art modeling without considering the credibility of each model.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 4
    ISSN: 1365-3059
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Relationships between the incidence and severity of brown foot rot and of pathogenic fungi, determined by diagnostic and quantitative PCR, were investigated during the growth of nine winter wheat crops in three cropping seasons. Microdochium nivale vars nivale and majus were the only brown foot rot pathogens present in significant amounts. Relationships between disease symptoms and amounts of pathogen DNA were often weak in early spring (when shoot-base symptoms are usually most difficult to ascribe to particular pathogens by visual examination) because of indistinct symptoms and small amounts of pathogen. Relationships were strongest during stem elongation. The amount of M. nivale in the tissues tended to decline in the summer as the plants matured, apparently disappearing partially from necrotic lesions to which it contributed, resulting in a weakened relationship between symptoms and pathogen DNA. Regression analyses of brown foot rot on amounts of M. nivale DNA for different wheat cultivars generally produced lines with similar slopes but were often most significant for the cultivar with most eyespot resistance (i.e. with least confounding eyespot) or most apparently genuine brown foot rot. DNA of Fusarium spp. was rarely present in amounts sufficient to quantify.
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  • 5
    ISSN: 1365-3059
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Diagnostic and quantitative polymerase chain reaction (PCR) provided clarification of the causes of symptoms and the extent of infection by eyespot (Tapesia spp.) and sharp eyespot (Rhizoctonia cerealis) on winter wheat at early growth stages. Disease assessments made before stem extension, when decisions to apply fungicides are usually made, often did not agree with the pathogen diagnoses using PCR, suggesting that such early visual diagnoses may be unreliable. Visual and PCR diagnoses made on stems in summer generally supported each other, but there were often discrepancies in relating disease severity to amounts of pathogen present when determined by regression analyses of incidence or severity of symptoms on amount of pathogen DNA. Mixed symptoms caused by different pathogens may sometimes have been confounded. Relationships between symptoms and DNA of eyespot pathogens were less clear on some cultivars, often those with least disease. Sharp eyespot symptoms had a stronger relationship to DNA of its pathogen. Significant regressions often accounted for a small percentage of the variance, suggesting either that pathogens not assayed were contributing to symptoms or that lesions were in some cases persisting longer into the season than pathogen DNA. The frequency of pathogen detection before stem extension was a poor predictor of the amounts of pathogen DNA measured later in the season.
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  • 6
    ISSN: 1365-3059
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: In 1999, New Zealand carrots (Daucus carota) exported to the Middle East incurred substantial damage due to bacterial soft rot that resulted in major financial loss to farmers. A modified carrot tissue bioassay was developed under standard conditions to provide an economical and rapid means of monitoring export carrots for bacteria able to cause severe bacterial soft rot. Using this bioassay, two bacterial isolates causing severe degradation were detected and subsequently identified as Pseudomonas viridiflava (designated NZCX09) and P. marginalis (NZCX27), using the Biolog system and 16S rRNA phylogenetic analysis. Investigation of disease epidemiology of NZCX09 and NZCX27 at low temperatures showed that tissue degradation occurred at temperatures approaching 0°C. These findings emphasize the importance of postharvest sanitization, and the efficacy of refrigeration methods used in controlling soft rots in carrots stored over time.
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  • 7
    ISSN: 1365-3091
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences
    Notes: Carbonate concretions in the Lower Carboniferous Caton Shale Formation contain diagenetic pyrite, calcite and barite in the concretion matrix or in different generations of septarian fissures. Pyrite was formed by sulphate reduction throughout the sediment before concretionary growth, then continued to form mainly in the concretion centres. The septarian calcites show a continuous isotopic trend from δ13C=−28·7‰ PDB and δ18O=−1·6‰ PDB through to δ13C=−6·9‰ PDB and δ18O=−14·6‰ PDB. This trend arises from (1) a carbonate source initially from sulphate reduction, to which was added increasing contributions of methanogenic carbonate; and (2) burial/temperature effects or the addition of isotopically light oxygen from meteoric water. The concretionary matrix carbonates must have at least partially predated the earliest septarian cements, and thus used the same carbonate sources. Consequently, their isotopic composition (δ13C=−12·0 to −10·1‰ PDB and δ18O=−5·7 to −5·6‰ PDB) can only result from mixing a carbonate cement derived from sulphate reduction with cements containing increasing proportions of carbonate from methanogenesis and, directly or indirectly, also from skeletal carbonate. Concretionary growth was therefore pervasive, with cements being added progressively throughout the concretion body during growth. The concretions contain barite in the concretion matrix and in septarian fissures. Barite in the earlier matrix phase has an isotopic composition (δ34S=+24·8‰ CDT and δ18O=+16·4‰ SMOW), indicating formation from near-surface, sulphate-depleted porewaters. Barites in the later septarian phase have unusual isotopic compositions (δ34S=+6 to +11‰ CDT and δ18O=+8 to +11‰ SMOW), which require the late addition of isotopically light sulphate to the porewaters, either from anoxic sulphide oxidation (using ferric iron) or from sulphate dissolved in meteoric water. Carbon isotope and biomarker data indicate that oil trapped within septarian fissures was derived from the maturation of kerogen in the enclosing sediments.
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  • 8
    ISSN: 1432-0967
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences
    Notes: Abstract The partitioning of the rare earth elements between a peraluminous monzogranitic melt and a chloride-bearing, sulfur- and carbon dioxide-free, aqueous volatile phase was examined experimentally as a function of chloride and major element concentrations at 800 °C and 200 MPa. The light rare earth elements (e.g. La, Ce) partition into the aqueous volatile phase to a greater extent than the heavy rare earth elements (e.g. Yb, Lu). Distribution of the rare earth elements and the major elements H, Na, K, Ca, and Al between the melt phase (mp) and aqueous volatile phase (aq) is a function of the chlorine concentration in the system, and our data are consistent with the rare earth and major elements occurring as chloride complexes in the aqueous volatile phase. Apparent equilibrium constants for experiments at 800 °C and 200 MPa, K ′ REE,Na aq/mp , expressed as the ratio of the concentration of a given rare earth element in the aqueous volatile phase to the concentration of the same element in the melt phase, divided by the cubed ratio of sodium in the aqueous volatile phase to the concentration of sodium in the melt phase, decrease systematically with increasing atomic number from K ′ La,Na aq/mp = 0.41(±0.03) to K ′ Lu,Na aq/mp =0.11(±0.01), except for Eu. These experimentally derived apparent equilibrium constants for the rare earth elements can be used in a numerical simulation of magmatic volatile exsolution. The simulation gave results consistent with the elemental distribution in the potassic alteration zone of a deep porphyry copper deposit, but higher concentrations of heavy rare earth elements are released into the magmatic aqueous solution than are captured in the secondary mineralization.
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  • 9
    Electronic Resource
    Electronic Resource
    Springer
    Oecologia 123 (2000), S. 32-40 
    ISSN: 1432-1939
    Keywords: Key words Carbon isotope ratio ; Stomatal density ; Leaf nitrogen content ; Leaf mass per area ; Evergreen conifers
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The natural ratio of stable carbon isotopes (δ13C) was compared to leaf structural and chemical characteristics in evergreen conifers in the north-central Rockies, United States. We sought a general model that would explain variation in δ13C across altitudinal gradients. Because variation in δ13C is attributed to the shifts between supply and demand for carbon dioxide within the leaf, we measured structural and chemical variables related to supply and demand. We measured stomatal density, which is related to CO2 supply to the chloroplasts, and leaf nitrogen content, which is related to CO2 demand. Leaf mass per area was measured as an intermediate between supply and demand. Models were tested on four evergreen conifers: Pseudotsuga menziesii, Abies lasiocarpa, Picea engelmannii, and Pinus contorta, which were sampled across 1800 m of altitude. We found significant variation among species in the rate of δ13C increase with altitude, ranging from 0.91‰ km–1 for A. lasiocarpa to 2.68‰ km–1 for Pinus contorta. Leaf structure and chemistry also varied with altitude: stomatal density decreased, leaf mass per area increased, but leaf nitrogen content (per unit area) was constant. The regressions on altitude were particularly robust in Pinus contorta. Variables were derived to describe the balance between supply and demand; these variables were stomata per gram of nitrogen and stomata per gram of leaf mass. Both derived variables should be positively related to internal CO2 supply and thus negatively related to δ13C. As expected, both derived variables were negatively correlated with δ13C. In fact, the regression on stomatal density per gram was the best fit in the study (r 2=0.72, P〈0.0001); however, the relationships were species specific. The only general relationship observed was between δ13C and LMA: δ13C (‰)=–32.972+ 0.0173×LMA (r 2=0.45, P〈0.0001). We conclude that species specificity of the isotopic shift indicates that evergreen conifers demonstrate varying degrees of functional plasticity across environmental gradients, while the observed convergence of δ13C with LMA suggests that internal resistance may be the key to understanding inter-specific isotopic variation across altitude.
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  • 10
    ISSN: 1573-6849
    Keywords: chromosome banding ; combined PI and DAPI (CPD) ; 4′6-diamidino-2-phenylindol (DAPI) ; fluorescent staining ; Lycopersicon ; marker chromosome ; nucleolar organiser region (NOR) ; Oryza ; propidium iodide (PI)
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract This paper presents a preparative and staining procedure for plant mitotic chromosomes that uses a combination of PI (propidium iodide) and DAPI (4′,6-diamidino-2-phenylindol) and which reveals a pattern of high-affinity regions for these fluorochromes. Nucleolar organiser regions (NORs), telomeres and centromeric regions exhibit high PI affinity (red), whereas other chromosomal regions exhibit high affinity for either PI (red) or DAPI (blue). NOR-bearing and other chromosomes are readily distinguished, facilitating karyotyping. The dual staining pattern was observed in all the plants tested. Aspects of NOR size, number and occurrence are discussed. A karyotype of rice metaphase chromosomes is presented, based on their fluorescent banding patterns.
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