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  • 2010-2014  (3)
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  • 1
    Publication Date: 2012-06-01
    Description: The Lava mouse ( Malpaisomys insularis ), and the Canarian shrew ( Crocidura canariensis ) are endemic of the Eastern Canary Islands and islets. The former is extinct while Canarian shrew survives in the two main islands and two islets. In order to provide insights regarding causes and processes contributing to the extinction of these endemic mammals: (i) we established last occurrence dates for Lava mouse, and first records for two exotic species – House mouse ( Mus musculus ) and Black rat ( Rattus rattus ) – through direct 14 C AMS dating of collagen from bones; (ii) we analysed recent material from Barn owl ( Tyto alba gracilirostris ) roosting sites to evaluate its impact on Canarian shrew in the presence of introduced rodents. The new data strongly suggest that the extinction of Lava mouse was the result of an accumulative process of independent disappearances (or ‘local extinctions’) affecting the isolated populations. The timing of the introduction of the Black rat on the main islands (before Middle Age European contact in Lanzarote and after Middle Age European contact in Fuerteventura) matches with the last occurrence dates for the presence of Lava mouse on these islands, and are very probably their cause. The losses of these Lava mouse populations occurred in an asynchronous way, spreading across at least six centuries. On small islands, hyperpredation emerges as the most plausible process to explain the disappearance of the Lava mouse in the absence of rat populations, although stochastic processes can not be definitively excluded.
    Print ISSN: 0959-6836
    Electronic ISSN: 1477-0911
    Topics: Geography , Geosciences
    Published by Sage
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  • 2
    Publication Date: 2014-06-21
    Description: The HIV-1 dimerization initiation sequence (DIS) is a conserved palindrome in the apical loop of a conserved hairpin motif in the 5'-untranslated region of its RNA genome. DIS hairpin plays an important role in genome dimerization by forming a ‘kissing complex’ between two complementary hairpins. Understanding the kinetics of this interaction is key to exploiting DIS as a possible human immunodeficiency virus (HIV) drug target. Here, we present a single-molecule Förster resonance energy transfer (smFRET) study of the dimerization reaction kinetics. Our data show the real-time formation and dissociation dynamics of individual kissing complexes, as well as the formation of the mature extended duplex complex that is ultimately required for virion packaging. Interestingly, the single-molecule trajectories reveal the presence of a previously unobserved bent intermediate required for extended duplex formation. The universally conserved A272 is essential for the formation of this intermediate, which is stabilized by Mg 2+ , but not by K + cations. We propose a 3D model of a possible bent intermediate and a minimal dimerization pathway consisting of three steps with two obligatory intermediates (kissing complex and bent intermediate) and driven by Mg 2+ ions.
    Print ISSN: 0305-1048
    Electronic ISSN: 1362-4962
    Topics: Biology
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  • 3
    Publication Date: 2014-05-09
    Print ISSN: 0305-1048
    Electronic ISSN: 1362-4962
    Topics: Biology
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