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  • 2020-2023  (1)
  • 2015-2019  (333)
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  • 1
    Monograph available for loan
    Monograph available for loan
    Kopenhagen : NIAS Press
    Call number: PIK N 076-13-0196
    Description / Table of Contents: Contents: 1 Introduction ; 2 Science Histories ; 3 Science Economics ; 4 Conserving Science and Composing Nature ; 5 Making Climate Change ; 6 The Circulation of Climate Change ; 7 The Science of Coming Home ; 8 Conclusion
    Type of Medium: Monograph available for loan
    Pages: XX, 270 S. : Ill., graph. Darst., Kt.
    ISBN: 9788776941284
    Series Statement: Nordic Institute of Asian Studies monograph series 124
    Location: A 18 - must be ordered
    Branch Library: PIK Library
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  • 2
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    Unknown
    PANGAEA
    In:  Supplement to: Mangelsdorf, Kai; Zink, Klaus-Gerhard; di Primio, Rolando; Horsfield, Brian (2011): Microbial lipid markers within and adjacent to Challenger Mound in the Belgica carbonate mound province, Porcupine Basin, offshore Ireland (IODP Expedition 307). Marine Geology, 282(1-2), 91-101, https://doi.org/10.1016/j.margeo.2010.05.007
    Publication Date: 2023-06-27
    Description: During the Integrated Ocean Drilling Program (IODP) Expedition 307 for the first time a cold-water coral carbonate mound was drilled down through its base into the underlying sediments. In the current study, sample material from within and below Challenger Mound, located in the Belgica carbonate mound province in the Porcupine Basin offshore Ireland, was investigated for its distribution of microbial communities and gas composition using biogeochemical and geochemical approaches to elucidate the question on the initiation of carbonate mounds. Past and living microbial populations are lower in the mound section compared to the underlying sediments or sediments of an upslope reference site. A reason for this might be a reduced substrate feedstock, reflected by low total organic carbon (TOC) contents, in the once coral dominated mound sequence. In contrast, in the reference site a lithostratigraphic sequence with comparatively high TOC contents shows higher abundances of both past and present microbial communities, indicating favourable living conditions from time of sedimentation until today. Composition and isotopic values of gases below the mound base seem to point to a mixed gas of biogenic and thermogenic origin with a higher proportion of biogenic gas. Oil-derived hydrocarbons were not detected at the mound site. This suggests that at least in the investigated part of the mound base the upward flow of fossil hydrocarbons, being one hypothesis for the initiation of the formation of carbonate mounds, seems to be only of minor significance.
    Keywords: 307-U1317A; 307-U1317D; 307-U1318A; 307-U1318B; DRILL; Drilling/drill rig; Exp307; Integrated Ocean Drilling Program / International Ocean Discovery Program; IODP; Joides Resolution; Porcupine Basin Carbonate Mounds
    Type: Dataset
    Format: application/zip, 4 datasets
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  • 3
    Publication Date: 2023-06-27
    Keywords: 307-U1317A; 307-U1317D; C1/(C2+C3) hydrocarbon ratio; Carbon dioxide; DEPTH, sediment/rock; DRILL; Drilling/drill rig; DSDP/ODP/IODP sample designation; Ethane; Event label; Exp307; Integrated Ocean Drilling Program / International Ocean Discovery Program; IODP; Isobutane; Isobutane/n-Butane ratio; Joides Resolution; Methane; n-Butane; Porcupine Basin Carbonate Mounds; Propane; Sample code/label; δ13C, methane; δ Deuterium, methane
    Type: Dataset
    Format: text/tab-separated-values, 158 data points
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  • 4
    Publication Date: 2023-06-27
    Keywords: 307-U1318A; DEPTH, sediment/rock; DRILL; Drilling/drill rig; Exp307; Integrated Ocean Drilling Program / International Ocean Discovery Program; IODP; Joides Resolution; Phosphatidylethanolamine, per unit mass total organic carbon; Phosphatidylethanolamine, per unit sediment dry mass; Phosphatidylglycerol, per unit mass total organic carbon; Phosphatidylglycerol, per unit sediment dry mass; Phospholipids, per unit mass total organic carbon; Phospholipids, per unit sediment dry mass; Porcupine Basin Carbonate Mounds; Sample code/label
    Type: Dataset
    Format: text/tab-separated-values, 54 data points
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  • 5
    Publication Date: 2023-11-30
    Keywords: 307-U1317A; 307-U1317D; Carbon, organic, total; DEPTH, sediment/rock; DRILL; Drilling/drill rig; DSDP/ODP/IODP sample designation; Event label; Exp307; Hopane, alpha/beta, per unit sediment dry mass; Hopane, alpha/beta, per unit sediment dry mass on a carbonate free base; Hopane, alpha/beta, total organic carbon; Hopane, beta/beta, per unit sediment dry mass; Hopane, beta/beta, per unit sediment dry mass on a carbonate free base; Hopane, beta/beta, total organic carbon; Integrated Ocean Drilling Program / International Ocean Discovery Program; IODP; Joides Resolution; n-Alkane C23-35, per unit sediment dry mass; n-Alkane C23-35, per unit sediment dry mass on a carbonate free base; n-Alkane C23-35, total organic carbon; Porcupine Basin Carbonate Mounds; Sample code/label; Total hopanoids, per unit sediment dry mass; Total hopanoids, per unit sediment dry mass on a carbonate free base; Total hopanoids, total organic carbon; δ13C, organic carbon
    Type: Dataset
    Format: text/tab-separated-values, 318 data points
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  • 6
    Publication Date: 2023-11-30
    Keywords: 307-U1318A; 307-U1318B; Carbon, organic, total; DEPTH, sediment/rock; DRILL; Drilling/drill rig; DSDP/ODP/IODP sample designation; Event label; Exp307; Hopane, alpha/beta, per unit sediment dry mass; Hopane, alpha/beta, per unit sediment dry mass on a carbonate free base; Hopane, alpha/beta, total organic carbon; Hopane, beta/beta, per unit sediment dry mass; Hopane, beta/beta, per unit sediment dry mass on a carbonate free base; Hopane, beta/beta, total organic carbon; Integrated Ocean Drilling Program / International Ocean Discovery Program; IODP; Joides Resolution; Mass spectrometer Finnigan Delta-E; n-Alkane C23-35, per unit sediment dry mass; n-Alkane C23-35, per unit sediment dry mass on a carbonate free base; n-Alkane C23-35, total organic carbon; Porcupine Basin Carbonate Mounds; Sample code/label; Total hopanoids, per unit sediment dry mass; Total hopanoids, per unit sediment dry mass on a carbonate free base; Total hopanoids, total organic carbon; δ13C, organic carbon
    Type: Dataset
    Format: text/tab-separated-values, 180 data points
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  • 7
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    Springer Spektrum
    In:  EPIC3Klimaanpassung in Forschung und Politik, Wiesbaden, Springer Spektrum, 260 p., pp. 119-141, ISBN: 978-3-658-05577-6
    Publication Date: 2017-01-06
    Description: Der Austausch von Wissen und Informationen zwischen verschiedenen gesellschaftlichen Gruppen ist oft nicht trivial. Vertreter aus der Öffentlichkeit, verschiedenen Fachkreisen und Behörden oder aus der Wissenschaft generieren sehr unterschiedliches Wissen unter Einbeziehung von unterschiedlichen Graden der Problemorientierung und ihrer jeweiligen Sprache. Zur Überwindung dieser Barrieren stehen verschiedene Instrumente zur Verfügung. In diesem Artikel werden drei weitverbreitete Formen des Wissenstransfers diskutiert: (1) Assessments mit ihren verschiedenen Formen z.B. auf unterschiedlichen räumlichen Skalen, (2) Indikatoren mit möglichen Rahmenkonzepten, Indikatorensätze und Formen der Evaluierung und (3) web-basierte Plattformen als einfache Möglichkeit der Verbreitung von aktuellen Informationen. Dabei werden zwei Beispiele ausführlich dargestellt, nämlich das am Klimbüro für Polargebiete und Meeresspiegelanstieg konzipierte Meereisportal und der am Mitteldeutschen Klimabüro entwicklete Deutsche Dürreatlas.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev
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  • 8
    Publication Date: 2022-05-25
    Description: This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
    Description: Fungal secretomes contain a wide range of hydrolytic and oxidative enzymes, including cellulases, hemicellulases, pectinases, and lignin-degrading accessory enzymes, that synergistically drive litter decomposition in the environment. While secretome studies of model organisms such as Phanerochaete chrysosporium and Aspergillus species have greatly expanded our knowledge of these enzymes, few have extended secretome characterization to environmental isolates or conducted side-by-side comparisons of diverse species. Thus, the mechanisms of carbon degradation by many ubiquitous soil fungi remain poorly understood. Here we use a combination of LC-MS/MS, genomic, and bioinformatic analyses to characterize and compare the protein composition of the secretomes of four recently isolated, cosmopolitan, Mn(II)-oxidizing Ascomycetes (Alternaria alternata SRC1lrK2f, Stagonospora sp. SRC1lsM3a, Pyrenochaeta sp. DS3sAY3a, and Paraconiothyrium sporulosum AP3s5-JAC2a). We demonstrate that the organisms produce a rich yet functionally similar suite of extracellular enzymes, with species-specific differences in secretome composition arising from unique amino acid sequences rather than overall protein function. Furthermore, we identify not only a wide range of carbohydrate-active enzymes that can directly oxidize recalcitrant carbon, but also an impressive suite of redox-active accessory enzymes that suggests a role for Fenton-based hydroxyl radical formation in indirect, non-specific lignocellulose attack. Our findings highlight the diverse oxidative capacity of these environmental isolates and enhance our understanding of the role of filamentous Ascomycetes in carbon turnover in the environment.
    Description: This work was supported by the National Science Foundation (www.nsf.gov), grant numbers EAR-1249489 and CBET-1336496, both awarded to CMH. Personal support for CAZ was also provided by Harvard University (www.harvard.edu) and by a Ford Foundation (www.fordfoundation.org) Predoctoral Fellowship administered by the National Academies.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 9
    Publication Date: 2022-10-26
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Zeiner, C. A., Purvine, S. O., Zink, E., Wu, S., Pasa-Tolic, L., Chaput, D. L., Santelli, C. M., & Hansel, C. M. Mechanisms of manganese(II) oxidation by filamentous ascomycete fungi vary with species and time as a function of secretome composition. Frontiers in Microbiology, 12, (2021): 610497, https://doi.org/10.3389/fmicb.2021.610497.
    Description: Manganese (Mn) oxides are among the strongest oxidants and sorbents in the environment, and Mn(II) oxidation to Mn(III/IV) (hydr)oxides includes both abiotic and microbially-mediated processes. While white-rot Basidiomycete fungi oxidize Mn(II) using laccases and manganese peroxidases in association with lignocellulose degradation, the mechanisms by which filamentous Ascomycete fungi oxidize Mn(II) and a physiological role for Mn(II) oxidation in these organisms remain poorly understood. Here we use a combination of chemical and in-gel assays and bulk mass spectrometry to demonstrate secretome-based Mn(II) oxidation in three phylogenetically diverse Ascomycetes that is mechanistically distinct from hyphal-associated Mn(II) oxidation on solid substrates. We show that Mn(II) oxidative capacity of these fungi is dictated by species-specific secreted enzymes and varies with secretome age, and we reveal the presence of both Cu-based and FAD-based Mn(II) oxidation mechanisms in all 3 species, demonstrating mechanistic redundancy. Specifically, we identify candidate Mn(II)-oxidizing enzymes as tyrosinase and glyoxal oxidase in Stagonospora sp. SRC1lsM3a, bilirubin oxidase in Stagonospora sp. and Paraconiothyrium sporulosum AP3s5-JAC2a, and GMC oxidoreductase in all 3 species, including Pyrenochaeta sp. DS3sAY3a. The diversity of the candidate Mn(II)-oxidizing enzymes identified in this study suggests that the ability of fungal secretomes to oxidize Mn(II) may be more widespread than previously thought.
    Description: This work was supported by the National Science Foundation, grant numbers EAR-1249489 and CBET-1336496, both awarded to CH, by a JGI-EMSL Collaborative Science Initiative grant (proposal number 48100) awarded to CH and CS, and by the University of St. Thomas. Personal support for CZ was also provided by Harvard University and by a Ford Foundation Predoctoral Fellowship administered by the National Academies. A portion of this research was performed under the Facilities Integrating Collaborations for User Science (FICUS) program and used resources at the DOE Joint Genome Institute and the Environmental Molecular Sciences Laboratory (grid.436923.9), which are DOE Office of Science User Facilities. Both facilities are sponsored by the Biological and Environmental Research Program and operated under Contract Nos. DE-AC02-05CH11231 (JGI) and DE-AC05-76RL01830 (EMSL). Part of this research was performed at the Bauer Core Facility of the FAS Center for Systems Biology at Harvard University. A portion of the bioinformatics analysis was performed at Harvard’s FAS Research Computing facility.
    Keywords: Manganese oxides ; Filamentous fungi ; Geomicrobiology ; Proteomics ; Biomineralization ; Secretome
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 10
    Publication Date: 2016-10-17
    Description: Schizophrenia is increasingly recognized as a disorder of distributed neural dynamics, but the molecular and genetic contributions are poorly understood. Recent work highlights a role for altered N-methyl-d-aspartate (NMDA) receptor signaling and related impairments in the excitation–inhibitory balance and synchrony of large-scale neural networks. Here, we combined a pharmacological intervention with novel techniques from dynamic network neuroscience applied to functional magnetic resonance imaging (fMRI) to identify alterations in the dynamic reconfiguration of brain networks related to schizophrenia genetic risk and NMDA receptor hypofunction. We quantified “network flexibility,” a measure of the dynamic reconfiguration of the community structure of time-variant brain networks during working memory performance. Comparing 28 patients with schizophrenia, 37 unaffected first-degree relatives, and 139 healthy controls, we detected significant differences in network flexibility [F(2,196) = 6.541, P = 0.002] in a pattern consistent with the assumed genetic risk load of the groups (highest for patients, intermediate for relatives, and lowest for controls). In an observer-blinded, placebo-controlled, randomized, cross-over pharmacological challenge study in 37 healthy controls, we further detected a significant increase in network flexibility as a result of NMDA receptor antagonism with 120 mg dextromethorphan [F(1,34) = 5.291, P = 0.028]. Our results identify a potential dynamic network intermediate phenotype related to the genetic liability for schizophrenia that manifests as altered reconfiguration of brain networks during working memory. The phenotype appears to be influenced by NMDA receptor antagonism, consistent with a critical role for glutamate in the temporal coordination of neural networks and the pathophysiology of schizophrenia.
    Print ISSN: 0027-8424
    Electronic ISSN: 1091-6490
    Topics: Biology , Medicine , Natural Sciences in General
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