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  • 1
    Publication Date: 2020-12-04
    Description: Microorganisms in marine subsurface sediments substantially contribute to global biomass.Sediments warmer than 40°C account for roughly half the marine sediment volume, but theprocesses mediated by microbial populations in these hard-to-access environments are poorlyunderstood. We investigated microbial life in up to 1.2-kilometer-deep and up to 120°C hotsediments in the Nankai Trough subduction zone. Above 45°C, concentrations of vegetativecells drop two orders of magnitude and endospores become more than 6000 times more abundantthan vegetative cells. Methane is biologically produced and oxidized until sediments reach 80°to 85°C. In 100° to 120°C sediments, isotopic evidence and increased cell concentrationsdemonstrate the activity of acetate-degrading hyperthermophiles. Above 45°C, populated zonesalternate with zones up to 192 meters thick where microbes were undetectable
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 2
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    In:  melissa_snover@nps.gov | http://aquaticcommons.org/id/eprint/14838 | 403 | 2014-02-28 23:00:28 | 14838 | United States National Marine Fisheries Service
    Publication Date: 2021-06-26
    Description: Understanding the phase and timing of ontogenetic habitat shifts underlies the study of a species’ life history and population dynamics. This information is especially critical to the conservation and management of threatened and endangered species, such as the loggerhead sea turtle Caretta caretta. The early life of loggerheads consists of a terrestrial egg and hatchling stage, a posthatchlingand juvenile oceanic, pelagic feeding stage, and a juvenile neritic, primarily benthic feeding stage. In the present study, novel approaches were applied to explore the timing of the loggerhead ontogenetic shift from pelagic to benthic habitats. The most recent years of somatic growth are recorded as annual marks in humerus cross sections. A consistent growth mark pattern in benthic juvenile loggerheads was identified, with narrow growth marks in the interior of the bone transitioning to wider growth marks at the exterior, indicative of a sharp increase in growth rates at the transitional growth mark. This increase in annual growth is hypothesized to correlate with the ontogenetic shift from pelagic to benthic habitats. Stable isotopes of carbon and nitrogen just interior and exteriorto the transitional growth mark, as well as stable isotopes from pelagic and benthic flora, fauna and loggerhead stomach contents, were analyzed to determine whether this transition related to a diet shift. The results clearly indicate that a dietary shift from oceanic/pelagic to neritic/benthic feeding corresponds to a transitional growth mark. The combination of stable isotope analysis with skeletochronology can elucidate the ecology of cryptic life history stages during loggerhead ontogeny.
    Keywords: Chemistry ; Fisheries
    Repository Name: AquaDocs
    Type: article , TRUE
    Format: application/pdf
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    Format: 25-31
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  • 3
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    In:  http://aquaticcommons.org/id/eprint/8764 | 403 | 2012-06-11 18:31:47 | 8764 | United States National Marine Fisheries Service
    Publication Date: 2021-06-26
    Description: Surveys with a remotely operated vehicle (ROV) at four mudhabitat sites with different histories of ocean shrimp (Pandalus jordani) trawling showed measurable effects oftrawling on macroinvertebrate abundance and diversity. Densities of the sea whip (Halipteris spp., P〈0.01), the flat mud star (Luidia foliolata, P〈 0.001), unidentified Asteroidea (P〈0.05), and squat lobsters (unidentifiedGalathoidea, P〈0.001) were lower at heavily trawled (HT) sites, as was invertebrate diversity based on theShannon-Wiener index. Sea cucumbers (unidentified Holothuroidea) and unidentified corals (Hydrocoralia)were observed at lightly trawled (LT) sites but not at HT sites. Hagfish (Eptatretus spp.) burrows were the dominant structural feature of the sediment surface at all sites andwere more abundant at the HT sites (P〈0.05), a result potentially related to effects from fishery discards. Substantial heterogeneity was found between the northern and southern site pairs, indicating high site-to-sitevariability in macroinvertebrate densities in these deep (146–156 m) mud habitats. Two of the study sites wereclosed to trawling in June 2006. The data from this study can be used in combination with future surveys to measure recovery rates of deep, mud, seaf loor habitats from the effects of trawling, thus providing a critical piece of information for ecosystem-based management.
    Keywords: Biology ; Ecology ; Fisheries
    Repository Name: AquaDocs
    Type: article , TRUE
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    Format: 30-38
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  • 4
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    In:  http://aquaticcommons.org/id/eprint/8799 | 403 | 2012-06-11 18:29:48 | 8799 | United States National Marine Fisheries Service
    Publication Date: 2021-06-27
    Description: The tidal freshwater of Virginia supports anadromous herring(Alosa spp.) spawning runs in the spring; however, their importance as nutrient delivery vectors to the freshwater fish food web remains unknown. The stable isotope signaturesof fishes from 21 species and four different guilds (predators, carnivores, generalists, and planktivores)were examined in this study to test the hypothesis that marine derived nutrients (MDNs) brought by anadromous fish would be traced into the guilds that incorporated them.Spawning anadromous fish were 13C and 34S-enriched (δ13C and δ34S of approximately 18‰ and 17.7‰, respectively)relative to resident freshwater fish. Of the guilds examined, only predators showed 13C and 34S-enrichmentsimilar to the anadromous fish; however, some generalist catfish also showed enriched signatures. Specific fatty acid δ13C signatures for gizzard shad (Dorosoma cepedianum), blue catfish (Ictalurus furcatus), and alewife(Alosa pseudoharengus), show a 10‰ range among fishes, clearly reflecting isotopically distinct dietary sources. The δ13C and δ34S distribution and range among the freshwater fishes suggest that both autochthonous and allochthonous (terrestrial C3 photosynthetic production and MDN) nutrient sources are important to the tidal freshwater fish community.
    Keywords: Biology ; Ecology ; Fisheries
    Repository Name: AquaDocs
    Type: article , TRUE
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    Format: 165-174
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  • 5
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    In:  http://aquaticcommons.org/id/eprint/13459 | 9596 | 2014-01-12 18:12:59 | 13459 | Gulf and Caribbean Fisheries Institute
    Publication Date: 2021-06-30
    Keywords: Fisheries ; GCFI
    Repository Name: AquaDocs
    Type: conference_item
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    Format: 10-25
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  • 6
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    In:  http://aquaticcommons.org/id/eprint/15703 | 33 | 2014-11-21 18:30:29 | 15703 | Gulf and Caribbean Fisheries Institute
    Publication Date: 2021-06-24
    Keywords: Fisheries ; GCFI
    Repository Name: AquaDocs
    Type: conference_item
    Format: 93-96
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  • 7
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    University of West Florida, Biology Department | Gainesville, FL
    In:  http://aquaticcommons.org/id/eprint/35 | 3 | 2020-08-24 02:36:56 | 35 | Florida Sea Grant College Program
    Publication Date: 2021-06-25
    Description: There is a critical need for accurate data in order to make decisions regarding the construction, emplacement, and further development of artificial reefs in the State of Florida.This study looked a biotic and abiotic parameters of articifial reefs. A data matrix listing reefs on the vertical axis and the associated biotic and a biotic data or attributes available from published and non-pub1ished sources on the horizontal axis created: 1) a compilation of what data were available; 2) an indication of the completeness and extensiveness of the data; 3) a summary of the descriptive statistics of the data; 4) a preliminaryanalysis of the relationship among the biotic and abiotic parameters through correlation analysis; 5) some preliminary modeling of the artificial reefs to form the basis of prediction through stepwise and multiple linearregression analysis. (29pp.)
    Keywords: Ecology ; Engineering ; Environment ; artificial reefs ; Florida ; ecology
    Repository Name: AquaDocs
    Type: monograph
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  • 8
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    University of West Florida | Pensacola, FL
    In:  http://aquaticcommons.org/id/eprint/412 | 3 | 2020-08-24 02:46:29 | 412 | Florida Sea Grant College Program
    Publication Date: 2021-06-29
    Description: Basic guide to fisheries biology. (178pp.)
    Description: Full text unsearchable; handwritten.
    Keywords: Education ; Fisheries ; Fisheries biology
    Repository Name: AquaDocs
    Type: monograph
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  • 9
    Publication Date: 2021-07-09
    Description: Tissues from Cook Inlet beluga whales, Delphinapterus leucas, that were collected as part of the Alaska Marine Mammal Tissue Archival Project were analyzed for polychlorinated biphenyls (PCB’s), chlorinated pesticides, and heavy metals and other elements. Concentrations of total PCB’s (ΣPCB’s), total DDT (ΣDDT), chlordane compounds, hexachlorobenzene (HCB), dieldrin, mirex, toxaphene, and hexachlorocyclohexane (HCH) measured in Cook Inlet beluga blubber were compared with those reported for belugas from two Arctic Alaska locations (Point Hope and Point Lay), Greenland, Arctic Canada, and the highly contaminated stock from the St. Lawrence estuary in eastern Canada. The Arctic and Cook Inlet belugas had much lower concentrations (ΣPCB’s and ΣDDT were an order of magnitude lower) than those found in animals from the St. Lawrence estuary. The Cook Inlet belugas had the lowest concentrations of all (ΣPCB’s aver-aged 1.49 ± 0.70 and 0.79 ± 0.56 mg/kg wet mass, and ΣDDT averaged 1.35 ± 0.73 and 0.59 ± 0.45 mg/kg in males and females, respectively). Concentrations in the blubber of the Cook Inlet males were significantly lower than those found in the males of the Arctic Alaska belugas (ΣPCB’s and ΣDDT were about half). The lower levels in the Cook Inlet animals might be due to differences in contaminant sources, food web differences, or different age distributions among the animals sampled. Cook Inlet males had higher mean and median concentrations than did females, a result attributable to the transfer of these compounds from mother to calf during pregnancy and during lactation. Liver concentrations of cadmium and mercury were lower in the Cook Inlet belugas (most cadmium values were 〈1 mg/kg and mercury values were 0.704–11.42 mg/kg wet mass), but copper levels were significantly higher in the Cook Inlet animals (3.97–123.8 mg/kg wet mass) than in Arctic Alaska animals and similar to those reported for belugas from Hudson Bay. Although total mercury levels were the lowest in the Cook Inlet population, methylmercury concentrations were similar among all three groups of the Alaska animals examined (0.34–2.11 mg/kg wet mass). As has been reported for the Point Hope and Point Lay belugas, hepatic concentrations of silver were re
    Keywords: Biology ; Ecology ; Fisheries
    Repository Name: AquaDocs
    Type: article , TRUE
    Format: application/pdf
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    Format: 81-98
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  • 10
    Publication Date: 2021-10-21
    Description: Diagenesis can have a major impact on sedimentary mineralogy. Primary magnetic mineral assemblages can be modified significantly by dissolution or by formation of new magnetic minerals during early or late diagenesis. At International Ocean Discovery Program Site C0023, which was drilled in the protothrust zone of the Nankai Trough during Expedition 370, offshore of Shikoku Island, Japan, non-steady state conditions have produced a complex sequence of magnetic overprints. Detailed rock magnetic measurements, which characterize magnetic mineral assemblages in terms of abundance, grain size, and composition, were conducted to assess magnetic mineral alteration and diagenetic overprinting. Four magnetic zones (MZs) are identified down-core from ∼200 to 1100 meters below sea floor based on rock magnetic variations. MZ 1 is a high magnetic intensity zone that contains ferrimagnetic greigite, which formed at shallow depths and is preserved because of rapid sedimentation. MZs 2 and 4 are low magnetic intensity zones with fewer magnetic minerals, mainly coarse-grained (titano-)magnetite and hematite. This magnetic mineral assemblage is a remnant of a more complex assemblage that was altered diagenetically a few million years after deposition when the site entered the Nankai Trough. MZ 3 is a high magnetic intensity zone between MZs 2 and 4. It contains authigenic single-domain magnetic particles that probably formed from fluids that circulated through faults in the accretionary prism. Varying sediment supply and organic matter input through time, burial temperature, and tectonic fluid circulation are the primary drivers of magnetic mineral assemblage variations.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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