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  • 1
    ISSN: 1662-8985
    Source: Scientific.Net: Materials Science & Technology / Trans Tech Publications Archiv 1984-2008
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Notes: An understanding of the physiology and metabolic complexity of microbial consortiainvolved in metal solubilization is a prerequisite for the rational improvement of bioleachingtechnologies. Among the most challenging aspects that remain to be addressed is how aerobicacidophiles, especially Fe(II)-oxidizers, contend with the paradoxical hazards of iron overload andiron deficiency, each with deleterious consequences for growth. Homeostatic mechanismsregulating the acquisition, utilization/oxidation, storage and intracellular mobilization of cellulariron are deemed to be critical for fitness and survival of bioleaching microbes. In an attempt tocontribute to the comprehensive understanding of the biology and ecology of the microbialcommunities in bioleaching econiches, we have used comparative genomics and other bioinformatictools to reconstruct the iron management strategies in newly sequenced acidithiobacilli and otherbiomining genomes available in public databases.Species-specific genes have been identified with distinctive functional roles in ironmanagement as well as genes shared by several species in biomining consortia. Their analysiscontributes to our understanding of the general survival strategies in acidic and iron loadedenvironments and suggests functions for genes with currently unknown functions that might revealnovel aspects of iron response in acidophiles. Comprehensive examination of the occurrence andconservation of regulatory functions and regulatory sites also allowed the prediction of the metalregulatory networks for these biomining microbes
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1662-8985
    Source: Scientific.Net: Materials Science & Technology / Trans Tech Publications Archiv 1984-2008
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Notes: Draft genome sequences of Acidithiobacillus thiooxidans ATCC 19377 and A. caldusATCC 51756 have been annotated. Bioinformatic analysis of these two new genomes, together withthat of A. ferrooxidans ATCC 23270, allows the prediction of metabolic and regulatory models foreach species and has provided a unique opportunity to undertake comparative genomic studies ofthis group of bioleaching bacteria. In this paper, we report preliminary information on metabolicand electron transfer pathways for ten characteristics of the three acidithiobacilli: CO2 fixation, theTCA cycle, sulfur oxidation, sulfur reduction, iron oxidation, iron assimilation, hydrogen oxidation,flagella formation, Che signaling (chemotaxis) and nitrogen fixation. Predicted transcriptional andmetabolic interplay between pathways pinpoints potential coordinated responses to environmentalsignals such as energy source, oxygen and nutrient limitations. The predicted pathway for nitrogenfixation in A. ferrooxidans will be described as an example of such an integrated response. Severalresponses appear to be especially characteristic of autotrophic microorganisms and may have directimplications for metabolic processes of critical relevance to the understanding of how thesemicroorganisms survive and proliferate in extreme environments, including industrial bioleachingoperations
    Type of Medium: Electronic Resource
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