ALBERT

All Library Books, journals and Electronic Records Telegrafenberg

feed icon rss

Your email was sent successfully. Check your inbox.

An error occurred while sending the email. Please try again.

Proceed reservation?

Export
  • 1
    Publication Date: 2021-05-19
    Description: Protecting coastal aquaculture systems as a habitat for aquatic systems is one of the serious concerns of the world. In the present study, spatial and temporal variations of Some physicochemical parameters, nutrient concentration and water quality In some estuaries of East and West of Hormozgan province were investigated from March 2015 to February 2016.Data analysis was performed using multivariate statistical methods (such as: CA,DA and PCA Analysis) and Eutrophication and water quality index using multivariable indices. The average annual variation of various parameters studied in West Azarbaijan province of Hormozgan is as follows:water temperature (18.1-34.6Co ), Salinity (35-45.6 ppt), Dissolved Oxygen (4.6-7.4 mg.l), pH (8.01-8.4), Nitrate (32.5- 403.5µmo.l), Nitrite (3.6-50.7 µmo.l), Total Ammonia (9.8-311.2 µmo.l), phosphate (22-569.1.6 µmo.l), and chlorophyll-a is equal to(0.46-4.04 mg.m3 ), respectively.Also, the mean annual variation of the various parameters studied in the eastern province of Hormozgan has been as follows: water temperature (18.1-34.6Co ), Salinity (35-45.6 ppt), Dissolved Oxygen (4.6-7.4 mg.l), pH (8.01-8.4), Nitrate (32.5-403.5µmo.l), Nitrite (3.6- 50.7 µmo.l), Total Ammonia (9.8-311.2 µmo.l), phosphate (22-569.1.6 µmo.l), and chlorophyll-a is equal to(0.46-4.04 mg.m3 ), respectively. One-Way Analysis of Variance test showed that the significant for some differences physicochemical parameters varied seasonally.Discriminant analysis, water quality conditions in terms of location classified into three groups.The analysis of PCA showed that the amount of nitrate and total ammonia in the tiba and phosphate in Laft and Kgamir Stricks with two sources (domestic and agricultural waste) and natural sources, can be considered as the main factors affecting the intensity of Eutrofication.The range of trophic Trix and TI eutrophication index in the studied areas were 4.3-6.1 and 3.5-4.2 respectively.According to on the indicators of and TI index, trophic status was classified into mesotrophic(in laft and khamir areas), Oligo-Mezotrophic(Yekshoveh area) and mezo- eutrophic respectively. Also Based on Trix index, the Water quality status was from bad condition in tiab area and good condition in laft, khamir and yekshoveh areas respectively. The determination of trophic conditions with a single-variable method based on chlorophyll a and Total inorganic Dissolved materials(DIN) showed a Very good agreement with multivariate trophic indices.The range of changes in some of the parameters studied in this study was more than the reported limit for the conservation of aquatic life in coastal areas.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Environmental ; Shrimp ; Habitats
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 76pp.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 2
    Publication Date: 2021-05-19
    Description: The research was carried out to investigate phytoplankton, zooplankton and Ichthyoplankton of Khamir, Laft in the western parts of Hormozgan Province and Tiab, Yekshabeh in the eastern parts of it for one year from March 2015 to November 2016. The aim of the study was to achieve seasonal changes of phytoplankton, zooplankton and Ichthyoplankton and compare them among estuaries. In order to achieve this goal, four stations were determined and seasonally sampled. Phytoplankton was taken 2 liter by bottle from 0.5 m below water surface, Zooplankton sampling was done by using standard plankton net with 55 micron mesh size that well equipped with flow meter by horizontal pulling and Bongo Net with 300 micron mesh size used for Ichthyoplankton sampling. During the study, 80 species of phytoplankton were identified, including 53 species, 24 species Dinophyceae, Cyanophycea 2 species and 1 species belonging to Dictyochophyceae. East and West estuaries had the 63% similar percentage of phytoplankton and results showed that 54 Bacillariophyceae genus were common in two regions. The Tiab estuary showed an average 21524±5903 cells/L of phytoplankton high density. Zooplankton was identified with eight phylum. The study of seasonal variations showed that in all seasons crustacean had higher density than other groups. Four copepods orders were identified which the calanoid had higher density and distribution in compare to others. 19 families of the larvae were identified and 69/99% similarity was also observed between estuaries of two region. Glupeidae, Gobiidae, Engraulidae and Scianidae families were abundant than other families. Shannon-Wiener, Maraglef and Evenness biological indices were found higher in west than the East estuaries. The results showed values were the highest in laft estuary, respectively H'= 3/22, d=7/11 and J'=0/72. The lowest biological indices in Tiab estuary, respectively H'= 2/233, d= 4/109 and J'= 0/597. The estuaries in the West had more diversity and eveness. The highest and lowest of biological indices were obtained (d= 5/948 and H= 2/759) and (d=2/825, H=0/830 and J=0/249) in the winter and summer, respectively.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Plankton ; Phytoplankton ; Zooplankton ; Icgthyoplankton ; Estuaries ; Survey
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 92pp.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 3
    Publication Date: 2021-05-19
    Description: Present study was conducted in the Persian Gulf (Iranian waters) from 2009 to 2012. The main objective of the research was economical evalution of the stock enhancement of banana prawn (Fenneropenaeus merguiensis) and green tiger shrimp (Penaeus semisulcatus) in the studied area. Also tagging effects on the growth and mortality of tagged shrimp were studied. In banana prawn, broodstock shrimps were hatched in June. In July 2010 and 2011some of the juvenile of this species were marked by red fluorescent liquid injection and released were made at night in the estuaries of Tiab, Kolahi and Koolgan in the Hormozgan province. 84000 juveniles of banana prawn in 2010 and about 50000 in 2011 were released in this area. In Bushehr province waters, adults shrimp were reared and when juveniles reached to optimum size, some of them were tagged by red and blue coloures and were released in the coastal waters of Bandargah and Delvar. Tagging and releasing program of green tiger prawn was performed in 2010 and 2012. A total number of 8000 prawn in 2010 and about 30000 juveniles prawn in 2010 were released. Activities for recaptured shrimps were informed by posters describing the tagging program that were distributed to local peoples, as well as local magazines, and a tagging program awareness film was broadcast on national television three times prior to the shrimp fishing season and during catch season. To encourage people to report recaptures a reward of two handered thousent riales was paid for the return of each marked shrimp accompanied by information. Economical evaluation of banana prawn was performed based on releasing and recaptured program in 2011. As it mentioned in this year 50000 of juvenile shrimp were tagged and released. At the same time 4700000 of unmarked shrimp were released in this area. In the shrimp season 11 (./022%) of tagged shrimp were recaptured. Movements of tagged shrimp were northwesterly to released area. Weight average of tagged prawns was 1.2 gram. Mean weight of the recaptured prawns was 22.06±4.9 gram. Body weight Growth of the recaptured prawns was between 16-26 grams with the growth speed of 0.88-1.41 per week. The number of recaptured prawn to the released prawn was 0.022 percent. Based on the released prawns (4700000) to the recaptured percent (./022%), about 103400 of released shrimp with mean weight of 2.5 tones were observed in the Hormozgan shrimp catch. The average price of shrimp in the studied year in the local market was 85000 Rials per kilogram. These results showed that the ratio of profit is 210 milion riales. In the taggiing program of green tiger prawn in the Bushehr waters only one recaptured shrimp was observed in the catch season (2012). Total weigth and total length of this prawn was 99 gram and 22 centimeter respectively .given the small percentage of the recaptured, economical analyses was not performed on this species. The effects of tagging on the growth and mortality of green tiger prawn were studied. The present study was carried out in the shrimp research station in Bandargah and Abzistan shrimp Hatchery Company in Delvar during 2010 and 2012. The accuracy of the study was more rialable in 2012. In this year growth and mortality of juveniles that was marked by red and blue coloures, were studied in both area Bandargah and Delvar. In Bandargah, three tanks of 300 l each with 30 specimens were used for untagged shrimp as a control group, and tagged with injected liquid fluorescent during 98 days. Length and weigh of 10 specimens were measured evenly in different times. ANOVA results (α = 0.1 and α = 0.5) showed no significant differences between length growth of tagged shrimp and control group. The mortality of two groups was evaluated by numbering of remained shrimps and the average of survival was 52 percent in the tagged and 44.5 percent in tagged shrimps. In the Delvar station, Abzistan Company, the specimens were kept in the 9 tanks each 300 l that included of 30 untagged shrimps, 30 blue tagged shrimps and 30 red florescent tagged shrimp. The growth and mortality of this station were evaluated during 110 days. The growth rate of the specimens were measured and recorded evenly. The results of ANOVA (α = 0.1 and α = 0.5) showed no difference significantly in the weight growth of tagged and control groups. The mortality rates among the control group, red tagged and blue tagged were 63 percent, 59 percent and 40 percent. The mortality of the groups was differences in the two stations and it seems the management and environmental conditions were more affected on the mortalities. The results of the study show that the ratio of profit to the coast is 0.46 that is covering half of the coasts, so that the expenditures are two times more than profit. This result is the minimum of economical value of stock enhacement of shrimp. The results of study showed that the injected tags into the body tissue of shrimp has no affected on the growth rate and mortality.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Stock enhancement ; Banana prawn ; Fenneropenaeus merguiensis ; Green tiger prawn ; Penaeus semisulcatus ; Mortality ; Growth rate
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 107pp.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 4
    Publication Date: 2021-05-19
    Description: For the first time white spot disease (WSD) was reported in shrimp farms of khoozestan province, in southwest of IRAN in 2002. Then in 2005 the neighbor province, boushehr, was contaminated. In 2008 WSD outbreak reported in sistan-bloochestan province in southeast of Iran. In 2015 all of southern shrimp farms of country except Hormozgan, the middle southern province, which has remained free of WSD, are being contaminated. White Spot disease suspended shrimp culture in thousands hectares of shrimp farms. Considering that white spot disease has not been observed in Hormozgan province yet, the question is; to what extent environmental and management factors participated in preventing WSD outbreak or cause WSD outbreak. In this study (20102012), the effects of environmental factors and management, stressors that decrease immune system function of shrimp are discussed. In addition, the role of pathogen as the main factor of outbreak is discussed. The goal of this study is to define environmental parameters and management practices associates with outbreak of white spot disease in affected provinces and discover reasons of being Hormozgan province free of this disease. In this study the role of the local environmental factors and management practice stressors in susceptibility to WSD was determine. Both the effects of environmental factors in water of ponds including total ammonia, nitrogen, dissolved oxygen, pH, salinity, transparency, and temperature and management issues related to biosecurity are studied. There were overlaps on physical and chemical parameter values obtained in clear areas with contaminated areas .Results of the data analysis suggest that lack of association with WSD incidence was 7 times greater than WSD incidence despite of disease outbreak in sistan-bloochestan province, so other sources of white spot disease virus incidence was suspected in affected areas. Histopathological examinations and polymerase chain reaction (PCR) tests during project performance did not reveal white spot disease virus evidences in post larvae examined from khoozestan province stocked in farms but disease outbreak was happened in that farms , so we suspected to management practice include feed , pond preparation and carrier of disease . Recorded values of temperature and salinity in some months during inspection in Hormozgan province specified stressful condition that may lead to WSD outbreak, however the disease did not appear. Therefore the hypothesis that the water physical and chemical conditions are reasons to prevent disease outbreak in Hormozgan province is being rejected. The policy of Hormozgan’s fishery authorities, to replaced Fenneropenaeus indicus with specific pathogen free Litopenaeus vannamei, that is more resistant to some of diseases, before incidence of WSD in farms and to before being endemic in the Hormozgan province, made an advantage compare to affected southern provinces that introduced Litopenaeus vannamei after WSD prevalence to their farms. However it does not guarantee to maintain current trend of being Hormozgan province farms free of white spot disease. Therefore establishing the principals of biosecurity are strongly emphasized. Strategies taken by the proficient authorities in preparation of SPF shrimp broodstock can be the most important factor in preventing WSD. Regarding biosecurity principals purchased feed must be free of shrimp head powder. Construction the new shrimp farms should be as far as it could be away from contaminated areas.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Environmental ; Physical ; Chemical ; Epidemiological study ; WSD ; Fenneropenaeus indicus ; Penaeus vannamei ; Shrimp ; White Spot Disease ; Temperature ; Salinity ; PCR ; Polymerase Chain Reaction ; Ammonia ; Nitrogen ; Dissolved oxygen ; pH ; Transparency
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 468pp.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 5
    Publication Date: 2021-05-19
    Description: Harmful algal blooms are global and expanding phenomena that cause adverse effects on human health, structure and function of ecosystems, fishery industries and aesthetics of the coastal regions. One of the major methods that was considered in integrated management strategy to control HABs is biological control using indigenous bacteria. The main aim of the present study was to achieve indigenous bacteria that could control HABs in Persian Gulf in lab scale. The water and sediment samples were collected seasonally from 10 stations throughout the Hormozgan province. In addition, four sponge species and three coral species were collected as isolation source of bacteria. The seasonal frequency pattern of bacteria in water and sediment samples showed that the minimum frequency was recorded in winter and the maximum was observed in the spring and summer. The diversity pattern of isolated bacteria revealed the higher bacterial diversity in sediment samples rather to water samples. The Vibrionacea, Bacillaceae, Enterobacteriaceae and Pseudomonadaceae families were dominated in sediments and water samples. While in sponge and coral samples the Streptomycetaceae and Alteromonadaceae families were prevalent. The algicidal pattern of isolated bacteria against Cochlodinium polykrikoides as a screening index revealed that sponges and corals included the highest proportion of potent algicidal bacteria (〉90%) with 40% and 28% respectively. Among 30 selected isolates, extracted secondary metabolites from 26 isolates exhibited LC50 less than 1 mg/ml against C. polykrikoides. Stepwise screening strategy was used to obtain bacteria with selective spectrum activity. Hence, biological activity of potent isolates were determined against related organisms. In this regard, the result of algicidal assay showed that 9 isolates could not inhibit the growth of galbana Isochrysis and Chlorella vulgaris as useful algal strains. The extracted metabolites from 90%, 55%, and 35 % of potent isolates exhibited antifungal activity against Candida albicans, Aspergillus niger and Penicillium chrysogenum at range of 64 to 1024 µg/ml. Moreover 65, 40, 80 and 25% of isolates showed antibacterial activity against Staphylococcus aureus ،Escherichia coli, Micrococcus luteus and Pseudomonas aeroginosa varied from 32 to 1024 µg/ml. Toxicity assay against Artemia salina revealed 30 % of isolates were not toxic up to 1000 µg/ml. in addition, 6 isolates showed any toxicity against shrimp larva in vitro. Determination of toxicity against human umbilical vein endothelial cells revealed that five isolates were not toxic and one isolate exhibited low toxicity. Finally, these six isolates selected for further studies. The growth kinetics of these six isolates revealed the relationship between the number of bacteria and their algicidal activity in co-culture condition. Moreover, the production of secondary metabolites determined as the main algicidal mechanism. The results of polyphasic identification showed that S 202, SP 149, SC 77, SP 158 and SC 41 isolates were new strains of Streptomyces rochei،Streptomyces olivaceus ،Streptomyces cavourensis، Pseudomonas azotoformans، Vibrio alginolyticus and W12 was belonged to Vibrio rotiferianus. The evolutionary route, genetic distance and divergency rate of the strains were determined. Chemical screening revealed the chemical profile and identity of extracted secondary metabolites from the six strains. Their chemical profile showed the presence of some functional groups, including terpenoids, flavonoids, peptides, indole alkaloids and phenols in crude extracts. The chemical identity of algicidal fractions of S 202, SP 149, SC 77, SC 41 strains were determined as terpenoid or flavonoid. While, the active fraction of SP 158 and W 12 belonged to phenols and peptide groups respectively. After the purification using chromatographic methods, high performance liquid chromatography recorded the retention time 10.58 and 11 for the active fractions of SC 41 and SP 149 respectively. This project led to the discovery of six strains of indigenous bacteria with selective algicidal activity against C. polykrikoides as the main cause of HABs in Persian Gulf and Oman Sea. These indigenous strains have essential prerequisites for biological control agent in situ condition and can consider as potential candidates in marine environments and aquaculture farms and cages in field studies. In addition, this study provided new understanding of seasonal distribution pattern and biodiversity of culturable bacteria in marine sediments and waters as well as bacterial diversity of collected indigenous sponge and coral samples from the Persian Gulf.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Biological control ; Harmful algal blooms ; Marine bacteria ; Algicidal compounds ; Cochlodinium polykrikoides
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 150pp.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 6
    Publication Date: 2021-05-19
    Description: This study focuses on molecular investigation of two commercial shrimp species of penaeus family namely as : P. merguiensis and P. indicus in order to find and introduce the genetic differentiations and also probable genotypes for monitoring and managing the genetic resources of populations in three major catch areas in the Persian Gulf and the Oman Sea. Only five out of the eight primers for p. merguiensis and four out of the eight primers for P. indicus produced good amplified PCR products with fixed annealing temperature. The rest of the primers were either not easily amplified or produced nonspecific bands. Seven and six alleles were found to be unique to each of the three populations in P.merguiensis and and two populations of P. indicus respectively. Occurrences of heterozygosity deficiency were found at most loci. These heterozygosity deficiencies in observed heterozygosity in compare to expected heterozygosity may be due to inbreeding, genetic drift and consequences of illegal overharvesting of P. merguiensis and P. indicus in the studied areas as well. Deviation from HWE in both studied species was significant in most microsatellite loci (P 〈0.001). We observed deviation from HWE in most loci with hetrozygosity deficits. The genetic variation results showed that the pairwise Fst values were significant between populations in both species. The assignment test for P. merguiensis revealed high gene flow between Hormoz and Jask and restricted genetic flow between Guatr and Hormoz populations .We observed high gene flow between Hormoz and Jask populations for P. indicus. It seems that the changes in immigration patterns of populations between Hormoz, Jask and Guatr areas in both species are depend on the influence of Persian Gulf currents or the life cycle of studied species. Alternatively, the presence of ecological barriers such as mangrove forests may result in restricted genetic flow between Guatr and both Hormoz and Jask populations.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Commercial ; Ecological ; Microsatellite markers ; P.merguiensis ; P. indicus ; PCR ; Molecular ; Species ; Genotype ; Population ; Temperature
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 84pp.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 7
    Publication Date: 2021-05-19
    Description: The present study ,Principal component analysis and multivariate index were used for Classification and determine of trophy by according to the European water framework directive in coastal water hormozgan province. In the proposed approach, the first principal component is used and evaluated as a eutrophication index on independent dataset and four variables nitrate, nitrite, ammonia and phosphate as abiotic factors for biomass and chlorophyll a was used as an indicator of phytoplankton production. Water samples were collected at 10 stations during the 12 months in 2012. During the investigation, Lower Trophy (0.1) were at stations 9 & 10 and the Highest value(1.5) observed at the station 3(goorsoozan area). Based on the criteria by according to the European water framework directive ,level trophy in near coastal water and far from coast of Bandar Abbas have been In the situation of mezotroph condition, and the area Jask and Lengeh in oligotrophic condition respectively.Temporal analysis of Trophic conditions showed that the trophic status can be divided into first(oligo- mezotroph) and second(Mezo-Eutroph) periods. Also in many times, the level of water quality in coastal water of Bandar Abbas is the rank good or fairly good and the other area(Jask and Lengeh ) the good rating respectively.The low quality of coastal water in Bandar Abbas due to the potential impacts of the entry of nutrients from domestic and urban sewage into coastal waters.
    Description: Published
    Keywords: Water quality ; Multivariate index ; Eutrophication ; PCA ; Determination ; Coastal waters
    Repository Name: AquaDocs
    Type: Journal Contribution , Refereed
    Format: pp.107-117
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 8
    Publication Date: 2021-05-19
    Description: Genetic knowledge and Gene bank preparation can help to protect biodiversity and detect , species identify , fishing offenses , genetic classification and also identification the faliure cross hybridizations of marine animals . In this study, sampling was performed from Jask, guatr and Hormuz areas, which is the most important habitats for the species studied using bottom trawl. Total DNA extraction was performed using phenol - chloroform method. After relevant studies on this gene primers were designed and in use. After editing the sequences, nucleotide BLAST (Basic Local Alignment Search Tool) was performed using NCBI blast main page. The sequences obtained from each sample were aligned and corrected from any ambiguities and assembled using Bio edit program .Trees were generated using maximum parsimony (MP), a character-based algorithm and neighbor joining (NJ) a distance-based algorithm for phenetic analysis. The distance matrix option of MEGA4 was used to calculate genetic distance according to the Kimura 2-parameter model of sequence evolution. Based on the results obtained, the optical density of 260 to 280 nm in the samples was recorded between 1/8 - 2, indicating good quality DNA samples. Optimized PCR reaction to 16SrRNA and COI gene amplification using the gradient between 48 - 60° C showed that the most suitable criteria for binding primers, 48 and 54 Celsius degrees respectively. The project objectives including the identification of the genetic structure of the species, and draw the phylogenetic trees using two genes 16SrRNA and COI, making identification and registration of specified computer storage and regulate the structure and management of mentioned species by focus on genetic resources 5 species of shrimp (P. semisulcatus ، P. indicus، P. merguiensis ، P. monodon، M. affinis) in the Persia Gulf and Oman Sea through the creation of an integrated network of aquatic genetic resources in the region to try to identify genetic resources and aquatic gene bank. Molecular investigation of mitochondria DNA (mtDNA) using partial sequences of 16S rRNA gene showed relatively low genetic differences between the P. semisulcatus morphotypes. These sequences were able to distinguish between the two morphotypes, and separated them into two distinct clades. Also genetic divergence detected by COI gene analysis was consistently higher. High genetic divergence for COI was observed between the two morphotypes of P.semeisulcatus which emphesise that the gene bank preparation should be perform for this morphotype of this species. This type of analysis could be considered as an important tool to be used in broodstock selection in breeding programs. In this case, different management in broodstocking programs should be performed for two morphotypes of P. semisulcatus which were detected in Persian Gulf. The results of this study show that two Morphotype of P.semisulcatus can be considered as two separate species from genetic aspects. In this regard, it can be assumed that the genetic composition of the studied species is very close together and we've no seen a huge difference in the species except in the green tiger species.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Gene Bank ; mtDNA ; Genetic Resourcess ; 16S rRNA ; Cytochrom Oxidase I ; P. semisulcatus ; P. indicus ; P. merguiensis ; P. monodon ; M. affinis ; Genetic
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 86pp.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 9
    Publication Date: 2021-05-19
    Description: Jinga shrimp Metapenaeus affinis is one of the most important penaeide shrimp species in Persian Gulf that has the highest amount of shrimp catch after banana shrimp in Hormozgan province. Regarding the importance of Jinga shrimp in fisheries of this province, genetic diversity and population structure of this species was assessed for the first time by mitochondrial 16SrRNA sequencing. A number of 18 shrimps were collected from the regions of Bandar Abbas, Bushehr and Khuzestan (six samples each region). DNA Extraction was performed using phenolchloroform and by optimizing the PCR for amplification of 16SrRNA, the most suitable temperature for primer binding was 48 °C. Analysis of 18 sequenced samples including 486 aligned base pairs of 16SrRNA yielded 480 monomorphic loci, 6 polymorphic loci and 2 transitions. No insertions and deletions were observed. 9 haplotypes were identified from the 18 samples. Mean haplotype diversity in each region was recorded from 0.0 ± 0.0 (Bandar Abbas) to 0.333 ± 0.215 (Bushehr) and 0.333 ± 0.215 (Khuzestan), and mean nucleotide diversity from 0.0 ± 0.0 (Bandar Abbas) to 0.003 ± 0.003 (Bushehr) and 0.001 ± 0.001 (Khuzestan). Haplotype and nucleotide diversity of all samples were 0.608 ± 0.007 and 0.002 ± 0.003, respectively. The maximum amount of F- statistic parameter was 0.750 between samples of Bandar Abbas and Khuzestan and the minimum amount between Bushehr and Khuzestan (-0.105). At probability level of 0.05, population differentiation was significant between Bandar Abbas and two other regions of Bushehr and Khuzestan but not significant between regions of Bushehr and Khuzestan. Test of exact p values within population confirmed the difference of Bandar Abbas population from the two other populations. Phylogenetic trees showed the differentiation of Bandar Abbas population from the two other regions. The results of this study using mitochondrial 16SrRNA sequencing revealed that the Jinga shrimp population of Bandar Abbas is a differentiated and separated gene pool from the two other regions, and although the populations of Bushehr and Khuzestan seem not genetically separated, molecular diversity of this species is acceptable in these two regions.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Sequencing ; Population structure ; 16SrRNA ; Jinga shrimp ; Metapenaeus affinis
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 60pp.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 10
    Publication Date: 2021-05-19
    Description: More than 20 viruses have been reported as pathogenic to shrimp.WSV has been found to be highly pathogenic not only to penaeid shrimps, but also to a wide range of hosts which include marine crabs , copepods, freshwater crabs and prawns. Main objective of this study was detection and identification of white spot virus from wild shrimp and crabs population on the coastal waters of Hormozgan Province.The samples were collected from three area seasonally include: coastal waters of Qeshm Island, Hengam Island and Jask. In this survey have been examined 1080 shrimp from each species of P.indicus, P.semisulcatus, P.merguiensis, Metapenaeus affinis and 1080 crabs (gill organs) by PCR and histopathological methods. Diagnostic kit for this survey have been prepared from Genesis Biotechnology CO.in Malaysia, so called "Single-Tube Nested PCR for WSSV". The analysis results revealed that all samples which examined from these area were free from WSV. Following PCR tests that were negative for all samples so no observed any damages of histology due to WSV on gills.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Biotechnology ; White Spot Disease ; Virus ; Penaeus ; PCR ; Histopathology ; Wild shrimps ; Crabs ; Pathogenic ; Marine ; Copepods ; Population ; P.indicus ; P.semisulcatus ; P.merguiensis ; Metapenaeus ; Genesis
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 43pp.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
Close ⊗
This website uses cookies and the analysis tool Matomo. More information can be found here...