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  • 1
    Publication Date: 2022-05-25
    Description: © 2009 The Authors. This article is distributed under the terms of the Creative Commons Attribution 3.0 License. The definitive version was published in Biogeosciences 6 (2009): 2099-2120, doi:10.5194/bg-6-2099-2009
    Description: Inclusion of fundamental ecological interactions between carbon and nitrogen cycles in the land component of an atmosphere-ocean general circulation model (AOGCM) leads to decreased carbon uptake associated with CO2 fertilization, and increased carbon uptake associated with warming of the climate system. The balance of these two opposing effects is to reduce the fraction of anthropogenic CO2 predicted to be sequestered in land ecosystems. The primary mechanism responsible for increased land carbon storage under radiatively forced climate change is shown to be fertilization of plant growth by increased mineralization of nitrogen directly associated with increased decomposition of soil organic matter under a warming climate, which in this particular model results in a negative gain for the climate-carbon feedback. Estimates for the land and ocean sink fractions of recent anthropogenic emissions are individually within the range of observational estimates, but the combined land plus ocean sink fractions produce an airborne fraction which is too high compared to observations. This bias is likely due in part to an underestimation of the ocean sink fraction. Our results show a significant growth in the airborne fraction of anthropogenic CO2 emissions over the coming century, attributable in part to a steady decline in the ocean sink fraction. Comparison to experimental studies on the fate of radio-labeled nitrogen tracers in temperate forests indicates that the model representation of competition between plants and microbes for new mineral nitrogen resources is reasonable. Our results suggest a weaker dependence of net land carbon flux on soil moisture changes in tropical regions, and a stronger positive growth response to warming in those regions, than predicted by a similar AOGCM implemented without land carbon-nitrogen interactions. We expect that the between-model uncertainty in predictions of future atmospheric CO2 concentration and associated anthropogenic climate change will be reduced as additional climate models introduce carbon-nitrogen cycle interactions in their land components.
    Description: This work was supported in part by NASA Earth Science Enterprise, Terrestrial Ecology Program, grant #W19,953 to P. E. Thornton. Support was provided by the National Center for Atmospheric Research (NCAR) through the NCAR Community Climate System Modeling program, and through the NCAR Biogeosciences program. Additional support was provided by the US Department of Energy, Office of Science, Office of Biological and Environmental Research. I. Fung, S. Doney, N. Mahowald, and J. Randerson acknowledge support from National Science Foundation, Atmospheric Sciences Division, through the Carbon and Water Initiative.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2022-05-26
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Atmospheric Chemistry and Physics 13 (2013): 7997-8018, doi:10.5194/acp-13-7997-2013.
    Description: We present multi-model global datasets of nitrogen and sulfate deposition covering time periods from 1850 to 2100, calculated within the Atmospheric Chemistry and Climate Model Intercomparison Project (ACCMIP). The computed deposition fluxes are compared to surface wet deposition and ice core measurements. We use a new dataset of wet deposition for 2000–2002 based on critical assessment of the quality of existing regional network data. We show that for present day (year 2000 ACCMIP time slice), the ACCMIP results perform similarly to previously published multi-model assessments. For this time slice, we find a multi-model mean deposition of approximately 50 Tg(N) yr−1 from nitrogen oxide emissions, 60 Tg(N) yr−1 from ammonia emissions, and 83 Tg(S) yr−1 from sulfur emissions. The analysis of changes between 1980 and 2000 indicates significant differences between model and measurements over the United States but less so over Europe. This difference points towards a potential misrepresentation of 1980 NH3 emissions over North America. Based on ice core records, the 1850 deposition fluxes agree well with Greenland ice cores, but the change between 1850 and 2000 seems to be overestimated in the Northern Hemisphere for both nitrogen and sulfur species. Using the Representative Concentration Pathways (RCPs) to define the projected climate and atmospheric chemistry related emissions and concentrations, we find large regional nitrogen deposition increases in 2100 in Latin America, Africa and parts of Asia under some of the scenarios considered. Increases in South Asia are especially large, and are seen in all scenarios, with 2100 values more than double their 2000 counterpart in some scenarios and reaching 〉 1300 mg(N) m−2 yr−1 averaged over regional to continental-scale regions in RCP 2.6 and 8.5, ~ 30–50% larger than the values in any region currently (circa 2000). However, sulfur deposition rates in 2100 are in all regions lower than in 2000 in all the RCPs. The new ACCMIP multi-model deposition dataset provides state-of-the-science, consistent and evaluated time slice (spanning 1850–2100) global gridded deposition fields for use in a wide range of climate and ecological studies.
    Description: ACCMIP is organized under the auspices of Atmospheric Chemistry and Climate (AC&C), a project of International Global Atmospheric Chemistry (IGAC) and Stratospheric Processes And their Role in Climate (SPARC) under the International Geosphere-Biosphere Programme (IGBP) and World Climate Research Program (WCRP). The authors are grateful to the British Atmospheric Data Centre (BADC), which is part of the NERC National Centre for Atmospheric Science (NCAS), for collecting and archiving the ACCMIP data. D. Shindell, G. Faluvegi and Y. Lee acknowledge support from the NASA MAP and ACMAP programs. D. Plummer would like to thank the Canadian Foundation for Climate and Atmospheric Sciences for their longrunning support of CMAM development. S. Ghan was supported by the US Department of Energy Office of Science Decadal and Regional Climate Prediction using Earth System Models (EaSM) program. The Pacific Northwest National Laboratory (PNNL) is operated for the DOE by Battelle Memorial Institute under contract DE-AC06-76RLO 1830. The work of D. Bergmann and P. Cameron-Smith was funded by the US Dept. of Energy (BER), performed under the auspices of LLNL under contract DE-AC52- 07NA27344, and used the supercomputing resources of NERSC under contract No. DE-AC02-05CH11231. G. Zeng acknowledges NIWA HPCF facility and funding from New Zealand Ministry of Science and Innovation. The GEOSCCM work was supported by the NASA Modeling, Analysis and Prediction program, with computing resources provided by NASA’s High-End Computing Program through the NASA Advanced Supercomputing Division. The STOC-HadAM3 work made use of the facilities of HECToR, the UK national high-performance computing service which is funded by the Office of Science and Technology through EPSRC High End Computing Programme. The CICERO-OsloCTM2 simulations were done within the projects SLAC (Short Lived Atmospheric Components) and EarthClim funded by the Norwegian Research Council and ECLIPSE (Evaluating the Climate and Air Quality Impacts of Short-Lived Pollutants) funded by the European Union. The MOCAGE simulations were supported by Météo-France and CNRS. Supercomputing time was provided by Météo-France/DSI supercomputing center. The CESM project (which includes CESM-CAM-Superfast, NCAR-CAM3.5 and NCAR-CAM5.1) is supported by the National Science Foundation and the Office of Science (BER) of the US Department of Energy. The National Center for Atmospheric Research is operated by the University Corporation for Atmospheric Research under sponsorship of the National Science Foundation. CMAP precipitation data are provided by the NOAA/OAR/ESRL PSD, Boulder, Colorado, USA, from their website at http://www.esrl.noaa.gov/psd/. We thank Robert Vet and his precipitation chemistry assessment team for making the WMO deposition dataset available prior to publication.We acknowledge the substantial efforts of the field and logistics personnel involved in collecting the ice cores including those from WAIS Divide, the Norwegian–United States Scientific Traverse of East Antarctica, and NEEM. We also thank Dan Pasteris and the other students and staff of the DRI ultra-trace ice core chemistry laboratory for help in analyzing the ice cores and the Office of Polar Programs at the National Science Foundation for supporting collection and analysis of the cores.
    Repository Name: Woods Hole Open Access Server
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  • 3
    ISSN: 1432-1424
    Keywords: Key words:Torpedo californica— Cassette mutagenesis — Single channel electrophysiology — Ion channel gating
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract. The effect of structural alterations of the M4 transmembrane segment in the Torpedo californica AChR has shown that substitution of specific residues can be critical to the channel gating (Lasalde et al., 1996). In a previous study we found that phenylalanine and tryptophan substitutions at the αC418 residue in the M4 transmembrane segment of the Torpedo californica AChR significantly altered ion channel function (Lee et al., 1994; Ortiz-Miranda et al., 1997). Cassette mutagenesis was used to mutate the Cys residue at the corresponding C418 position in the α subunit of mouse AChR. A total of nine mutations on the mouse αC418 position were tested, including the αC418A, αC418V, αC418L, αC418S, αC418M, αC418W, αC418H, αC418E and αC418G mutants. All the mutants tested were functional except the αC418G which was not expressed on the surface of the oocyte. The data obtained from macroscopic and single channel currents demonstrate that different types of amino acids can be accommodated at this presumably lipid-exposed position without loss of ion-channel function. As with the Torpedo AChR, the mutation of Cys to Trp dramatically decreased the EC50 for acetylcholine and increased channel open time. The lack of expression of the mouse αC418G suggest that there are some differences in folding, oligomerization and perhaps transport to the surface membrane for this mutant between the Torpedo and the mammalian AChR.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Biochemical and Biophysical Research Communications 68 (1976), S. 409-416 
    ISSN: 0006-291X
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Chemistry and Pharmacology , Physics
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 0378-1119
    Keywords: E. coli host ; Erwinia ; Recombinant DNA ; Xanthomonas ; lac promoter ; plasmid ; shuttle vector ; signal peptide
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
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  • 6
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Comparative Biochemistry and Physiology -- Part B: Biochemistry and 101 (1992), S. 587-590 
    ISSN: 0305-0491
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Comparative Biochemistry and Physiology -- Part B: Biochemistry and 108 (1994), S. 189-197 
    ISSN: 0305-0491
    Keywords: Anguilla japonica ; Sex steroid-binding protein
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Insect Biochemistry and Molecular Biology 24 (1994), S. 473-480 
    ISSN: 0965-1748
    Keywords: Adipokinetic hormone Carbohydrate metabolism ; Blaberus discoidalis ; Cockroaches ; Fat body metabolism ; Hyperglycemic hormone ; Insect hypertrehalosemic hormone ; Trehalose ; Trehalose synthesis
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Insect Biochemistry and Molecular Biology 24 (1994), S. 357-362 
    ISSN: 0965-1748
    Keywords: Cockroach ; Fat body metabolism ; Gene expression ; Hypertrehalosemic hormone
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Sensors and Actuators B: Chemical 13 (1993), S. 86-88 
    ISSN: 0925-4005
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
    Type of Medium: Electronic Resource
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