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  • 1
    Publication Date: 1998
    Keywords: URSEIS, Urals, reflection seismics, tectonics/crustal structure
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  • 2
    Publication Date: 2016-05-12
    Description: Extra-helical binding site of a glucagon receptor antagonist Nature 533, 7602 (2016). doi:10.1038/nature17414 Authors: Ali Jazayeri, Andrew S. Doré, Daniel Lamb, Harini Krishnamurthy, Stacey M. Southall, Asma H. Baig, Andrea Bortolato, Markus Koglin, Nathan J. Robertson, James C. Errey, Stephen P. Andrews, Iryna Teobald, Alastair J. H. Brown, Robert M. Cooke, Malcolm Weir & Fiona H. Marshall Glucagon is a 29-amino-acid peptide released from the α-cells of the islet of Langerhans, which has a key role in glucose homeostasis. Glucagon action is transduced by the class B G-protein-coupled glucagon receptor (GCGR), which is located on liver, kidney, intestinal smooth muscle, brain, adipose tissue, heart and pancreas cells, and this receptor has been considered an important drug target in the treatment of diabetes. Administration of recently identified small-molecule GCGR antagonists in patients with type 2 diabetes results in a substantial reduction of fasting and postprandial glucose concentrations. Although an X-ray structure of the transmembrane domain of the GCGR has previously been solved, the ligand (NNC0640) was not resolved. Here we report the 2.5 Å structure of human GCGR in complex with the antagonist MK-0893 (ref. 4), which is found to bind to an allosteric site outside the seven transmembrane (7TM) helical bundle in a position between TM6 and TM7 extending into the lipid bilayer. Mutagenesis of key residues identified in the X-ray structure confirms their role in the binding of MK-0893 to the receptor. The unexpected position of the binding site for MK-0893, which is structurally similar to other GCGR antagonists, suggests that glucagon activation of the receptor is prevented by restriction of the outward helical movement of TM6 required for G-protein coupling. Structural knowledge of class B receptors is limited, with only one other ligand-binding site defined—for the corticotropin-releasing hormone receptor 1 (CRF1R)—which was located deep within the 7TM bundle. We describe a completely novel allosteric binding site for class B receptors, providing an opportunity for structure-based drug design for this receptor class and furthering our understanding of the mechanisms of activation of these receptors.
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Published by Springer Nature
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  • 3
    Publication Date: 2013-06-12
    Description: The ability to sense metabolic stress is critical for successful cellular adaptation. In eukaryotes, the AMP-activated protein kinase (AMPK), a highly conserved serine/threonine kinase, functions as a critical metabolic sensor. AMPK is activated by the rising ADP/ATP and AMP/ATP ratios during conditions of energy depletion and also by increasing intracellular...
    Print ISSN: 0027-8424
    Electronic ISSN: 1091-6490
    Topics: Biology , Medicine , Natural Sciences in General
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  • 4
    Publication Date: 2001-09-22
    Description: We derive a general model, based on principles of biochemical kinetics and allometry, that characterizes the effects of temperature and body mass on metabolic rate. The model fits metabolic rates of microbes, ectotherms, endotherms (including those in hibernation), and plants in temperatures ranging from 0 degrees to 40 degrees C. Mass- and temperature-compensated resting metabolic rates of all organisms are similar: The lowest (for unicellular organisms and plants) is separated from the highest (for endothermic vertebrates) by a factor of about 20. Temperature and body size are primary determinants of biological time and ecological roles.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gillooly, J F -- Brown, J H -- West, G B -- Savage, V M -- Charnov, E L -- New York, N.Y. -- Science. 2001 Sep 21;293(5538):2248-51.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, The University of New Mexico, Albuquerque, NM 87131, USA. gillooly@unm.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11567137" target="_blank"〉PubMed〈/a〉
    Keywords: Amphibians/metabolism ; Animals ; *Basal Metabolism ; *Body Constitution ; Body Temperature ; *Body Weight ; Carbon Dioxide/metabolism ; Fishes/metabolism ; Fractals ; Longevity ; Mammals/metabolism ; Mathematics ; *Models, Biological ; Oxygen Consumption ; Plants/metabolism ; Reptiles/metabolism ; Species Specificity ; *Temperature
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 5
    Publication Date: 2002-08-31
    Description: The latitudinal gradient of increasing biodiversity from poles to equator is one of the most prominent but least understood features of life on Earth. Here we show that species diversity can be predicted from the biochemical kinetics of metabolism. We first demonstrate that the average energy flux of populations is temperature invariant. We then derive a model that quantitatively predicts how species diversity increases with environmental temperature. Predictions are supported by data for terrestrial, freshwater, and marine taxa along latitudinal and elevational gradients. These results establish a thermodynamic basis for the regulation of species diversity and the organization of ecological communities.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Allen, Andrew P -- Brown, James H -- Gillooly, James F -- New York, N.Y. -- Science. 2002 Aug 30;297(5586):1545-8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA. drewa@unm.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12202828" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Body Constitution ; *Ecosystem ; Kinetics ; *Models, Biological ; Plants ; Temperature ; Thermodynamics
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 6
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1999-06-05
    Description: Fractal-like networks effectively endow life with an additional fourth spatial dimension. This is the origin of quarter-power scaling that is so pervasive in biology. Organisms have evolved hierarchical branching networks that terminate in size-invariant units, such as capillaries, leaves, mitochondria, and oxidase molecules. Natural selection has tended to maximize both metabolic capacity, by maximizing the scaling of exchange surface areas, and internal efficiency, by minimizing the scaling of transport distances and times. These design principles are independent of detailed dynamics and explicit models and should apply to virtually all organisms.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉West, G B -- Brown, J H -- Enquist, B J -- New York, N.Y. -- Science. 1999 Jun 4;284(5420):1677-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Theoretical Division, MS B285, Los Alamos National Laboratory, Los Alamos, NM 87545, USA. gbw@lanl.gov〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/10356399" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Blood Vessels/anatomy & histology ; *Body Constitution ; *Body Surface Area ; *Fractals ; Humans ; Mathematics ; *Metabolism ; *Models, Biological ; Plants/anatomy & histology ; Selection, Genetic
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 7
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1999-12-22
    Description: This study challenges the use of adult neuropsychological models for explaining developmental disorders of genetic origin. When uneven cognitive profiles are found in childhood or adulthood, it is assumed that such phenotypic outcomes characterize infant starting states, and it has been claimed that modules subserving these abilities start out either intact or impaired. Findings from two experiments with infants with Williams syndrome (a phenotype selected to bolster innate modularity claims) indicate a within-syndrome double dissociation: For numerosity judgments, they do well in infancy but poorly in adulthood, whereas for language, they perform poorly in infancy but well in adulthood. The theoretical and clinical implications of these results could lead to a shift in focus for studies of genetic disorders.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Paterson, S J -- Brown, J H -- Gsodl, M K -- Johnson, M H -- Karmiloff-Smith, A -- New York, N.Y. -- Science. 1999 Dec 17;286(5448):2355-8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Neurocognitive Development Unit, Institute of Child Health, University College, London WC1N 1EH, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/10600749" target="_blank"〉PubMed〈/a〉
    Keywords: Adult ; Brain/*physiopathology ; Case-Control Studies ; Child, Preschool ; *Cognition ; Down Syndrome/genetics/physiopathology/psychology ; Female ; Humans ; Infant ; *Language Development ; Male ; Matched-Pair Analysis ; Mathematics ; Neuropsychological Tests ; Phenotype ; Vocabulary ; Williams Syndrome/genetics/*physiopathology/psychology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 8
    Publication Date: 2001-04-09
    Description: Because individual species can play key roles, the loss of species through extinction or their gain through colonization can cause major changes in ecosystems. For almost 20 years after kangaroo rats were experimentally removed from a Chihuahuan desert ecosystem in the United States, other rodent species were unable to compensate and use the available resources. This changed abruptly in 1995, when an alien species of pocket mouse colonized the ecosystem, used most of the available resources, and compensated almost completely for the missing kangaroo rats. These results demonstrate the importance of individual species and of colonization and extinction events in the structure and dynamics of ecosystems.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ernest, S K -- Brown, J H -- New York, N.Y. -- Science. 2001 Apr 6;292(5514):101-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, University of New Mexico, Albuquerque, NM 87131 USA. morgan.ernest@ttu.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11292873" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Arizona ; Body Constitution ; Body Weight ; Desert Climate ; Dipodomys/*physiology ; *Ecosystem ; Feeding Behavior ; *Food Chain ; Plants ; Rodentia/*physiology ; Seeds
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 9
    Publication Date: 2001-07-28
    Description: Studies that combine experimental manipulations with long-term data collection reveal elaborate interactions among species that affect the structure and dynamics of ecosystems. Research programs in U.S. desert shrubland and pinyon-juniper woodland have shown that (i) complex dynamics of species populations reflect interactions with other organisms and fluctuating climate; (ii) genotype x environment interactions affect responses of species to environmental change; (iii) herbivore-resistance traits of dominant plant species and impacts of "keystone" animal species cascade through the system to affect many organisms and ecosystem processes; and (iv) some environmental perturbations can cause wholesale reorganization of ecosystems because they exceed the ecological tolerances of dominant or keystone species, whereas other changes may be buffered because of the compensatory dynamics of complementary species.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Brown, J H -- Whitham, T G -- Morgan Ernest, S K -- Gehring, C A -- New York, N.Y. -- Science. 2001 Jul 27;293(5530):643-50.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA. jhbrown@unm.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11474100" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Arizona ; Desert Climate ; *Ecosystem ; Environment ; Genotype ; *Gymnosperms ; Moths/physiology ; Plants ; Population Dynamics ; *Rodentia/physiology ; Time Factors ; *Trees ; Weather
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 10
    Publication Date: 1990-12-21
    Description: Twelve years after three species of kangaroo rats (Dipodomys spp.) were removed from plots of Chihuahuan Desert shrub habitat, density of tall perennial and annual grasses had increased approximately threefold and rodent species typical of arid grassland had colonized. These were just the most recent and drmatic in a series of changes in plants and animals caused by experimental exclusion of Dipodomys. In this ecosystem kangaroo rats are a keystone guild: through seed predation and soil disturbance they have major effects on biological diversity and biogeochemical processes.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Brown, J H -- Heske, E J -- New York, N.Y. -- Science. 1990 Dec 21;250(4988):1705-7.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/17734708" target="_blank"〉PubMed〈/a〉
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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