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  • 1
    Publication Date: 2023-01-20
    Description: We present the first global ocean‐biogeochemistry model that uses a telescoping high resolution for an improved representation of coastal carbon dynamics: ICON‐Coast. Based on the unstructured triangular grid topology of the model, we globally apply a grid refinement in the land‐ocean transition zone to better resolve the complex circulation of shallow shelves and marginal seas as well as ocean‐shelf exchange. Moreover, we incorporate tidal currents including bottom drag effects, and extend the parameterizations of the model's biogeochemistry component to account explicitly for key shelf‐specific carbon transformation processes. These comprise sediment resuspension, temperature‐dependent remineralization in the water column and sediment, riverine matter fluxes from land including terrestrial organic carbon, and variable sinking speed of aggregated particulate matter. The combination of regional grid refinement and enhanced process representation enables for the first time a seamless incorporation of the global coastal ocean in model‐based Earth system research. In particular, ICON‐Coast encompasses all coastal areas around the globe within a single, consistent ocean‐biogeochemistry model, thus naturally accounting for two‐way coupling of ocean‐shelf feedback mechanisms at the global scale. The high quality of the model results as well as the efficiency in computational cost and storage requirements proves this strategy a pioneering approach for global high‐resolution modeling. We conclude that ICON‐Coast represents a new tool to deepen our mechanistic understanding of the role of the land‐ocean transition zone in the global carbon cycle, and to narrow related uncertainties in global future projections.
    Description: Plain Language Summary: The coastal ocean is an area hardly taken into account by current climate change assessment activities. Yet, its capacity in carbon dioxide (CO2) uptake and storage is crucial to be included in a science‐based development of sustainable climate change mitigation and adaptation strategies. Earth system models are powerful tools to investigate the marine carbon cycle of the open ocean. The coastal ocean, however, is poorly represented in global models to date, because of missing key processes controlling coastal carbon dynamics and too coarse spatial resolutions to adequately simulate coastal circulation features. Here, we introduce the first global ocean‐biogeochemistry model with a dedicated representation of the coastal ocean and associated marine carbon dynamics: ICON‐Coast. In this model, we globally apply a higher resolution in the coastal ocean and extend the accounted physical and biogeochemical processes. This approach enables for the first time a consistent, seamless incorporation of the global coastal ocean in model‐based Earth system research. In particular, ICON‐Coast represents a new tool to deepen our understanding about the role of the land‐ocean transition zone in the global climate system, and to narrow related uncertainties in possible and plausible climate futures.
    Description: Key Points: We introduce the first global ocean‐biogeochemistry model with a dedicated representation of coastal carbon dynamics. We globally apply a grid refinement in the coastal ocean to better resolve regional circulation features, including ocean‐shelf exchange. We explicitly incorporate key physical and biogeochemical processes controlling coastal carbon dynamics.
    Description: German Research Foundation, Excellence Strategy EXC 2037 (CLICCS)
    Description: European Union, Horizon2020 Research and Innovation Program (ESM2025)
    Description: German Federal Ministry of Education
    Description: https://doi.org/10.5281/zenodo.6630352
    Keywords: ddc:551 ; coastal ocean ; global modeling ; marine carbon cycle ; variable‐resolution grid ; ocean‐biogiochemistry ; high‐resolution modeling
    Language: English
    Type: doc-type:article
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  • 2
    ISSN: 1432-1866
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences
    Notes: Abstract The Jupiter gold deposit in the northeastern Eastern Goldfields Province of the Yilgarn Craton of Western Australia is hosted in greenschist facies metamorphosed tholeiitic basalt, quartz–alkali-feldspar syenite, and quartz–feldspar porphyry. Syenite intrudes basalt as irregularly shaped dykes which radiate from a larger stock, whereas at least three E–W and NE–SW striking quartz–feldspar porphyries intrude both syenite and basalt. Brittle–ductile shear zones are shallow-dipping, NW to NE striking, or are steep-dipping to the south and west. Quartz ± carbonate veins that host gold at Jupiter occur in all lithologies and are divided into: (1) veins that are restricted to the shear zones, (2) discrete veins that are subparallel to shear zone-hosted veins, and (3) stockwork veins that form a network of randomly oriented microfractures in syenite wallrock proximal to shallow-dipping shear zones. The gold-bearing veins comprise mainly quartz, calcite, ankerite, and albite, with minor sericite, pyrite, chalcopyrite, galena, sphalerite, molybdenite, telluride minerals, and gold. Proximal hydrothermal alteration zones to the mineralised veins comprise quartz, calcite, ankerite, albite, and sericite. High gold grades (〉2 g/t Au) occur mainly in syenite and in the hanging walls to shallow-dipping shear zones in syenite where there is a greater density of mineralised stockwork veins. The Jupiter deposit has structural and hydrothermal alteration styles that are similar to both granitoid-hosted, but post-magmatic Archaean lode-gold deposits in the Yilgarn Craton and intrusion-related, syn-magmatic, syenite-hosted gold deposits in the Superior Province of Canada. Based on field observations and petrologic data, the Jupiter deposit is considered to be a post-magmatic Archaean lode-gold deposit rather than a syn-intrusion deposit.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1432-1866
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences
    Notes: Abstract The Luziânia gold deposits in southern Goiás lie within the Late Proterozoic Brasília fold belt. The rocks that host the gold mineralization are a monotonous series of hydrothermally altered phyllites that have been subject to low grade regional metamorphism. The major controls on the gold mineralization are northeast trending and gently northwest dipping ductile-brittle, dextral-reverse shear zones associated with regional thin-skinned thrusting of the Canastra Group. From a preliminary fluid inclusion study it is deduced that low salinity, ⩽ 7 eq. wt% NaCl, moderately dense, H2O-CO2 ± CH4 ore fluids deposited gold at temperatures of 300 ± 75°C and pressures of 1.5 to 3 kb in the filling stage of the vein formation. Post-filling stage gold deposition probably occured by mixing of fluids at higher crustal levels (1.5–2 kb). During thrusting, prograde metamorphism released pore water which penetrated along thrust planes that acted as high permeability zones for the ponding and release, by hydraulic fracturing, of overpressured fluids. Later in the tectonic evolution and at shallower crustal levels, there was likely an incursion of near suface water into the fault zone.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Springer
    Mineralium deposita 30 (1995), S. 408-410 
    ISSN: 1432-1866
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences
    Notes: Abstract Recent research has shown that Archaean lode-gold deposits occur in environments that range in their metamorphic grade from prehnite-pumpellyite to lower granulite facies. Based on this data a new classification is proposed for these deposits. In this classification, shallow-level gold deposits are classed as epizonal, the so-called “mesothermal” deposits are mesozonal, and the deeper deposits, commonly in mid-amphibolite or lower-granulite terrains, are hypozonal.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 1432-1866
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences
    Notes: Abstract Giant iron-ore deposits, such as those in the Hamersley Province of northwestern Australia, may contain more than a billion tonnes of almost pure iron oxides and are the world's major source of iron. It is generally accepted that these deposits result from supergene oxidation of host banded iron formation (BIF), accompanied by leaching of silicate and carbonate minerals. New textural evidence however, shows that formation of iron ore at one of those deposits, Mount Tom Price, involved initial high temperature crystallisation of magnetite-siderite-iron silicate assemblages. This was followed by development of hematite- and ferroan dolomite-bearing assemblages with subsequent oxidation of magnetite, leaching of carbonates and silicates and crystallisation of further hematite. Preliminary fluid inclusion studies indicate both low and high salinity aqueous fluids as well as complex salt-rich inclusions with the range of fluid types most likely reflecting interaction of hydrothermal brines with descending meteoric fluids. Initial hematite crystallisation occurred at about 250 °C and high fluid pressures and continued as temperatures decreased. Although the largely hydrothermal origin for mineralisation at Mount Tom Price is in conflict with previously proposed supergene models, it remains consistent with interpretations that the biosphere contained significant oxygen at the time of mineralisation.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    Springer
    Chromosoma 107 (1998), S. 6-16 
    ISSN: 1432-0886
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract. A potentially full-sized P element isolated from the genome of Drosophila ambigua by polymerase chain reaction amplification was completely sequenced. It has a length of 3329 bp and the termini are formed by 33 bp inverted repeats. Sequence comparisons show that it can be classified as a member of the T-type P element subfamily. The translational reading frames of all four exons are interrupted by stop codons and frameshift mutations. At the 3′ end of exon 3 a 687 bp insertion sequence (IS-amb-P) is found that also occurs in the form of dispersed copies (IS-amb) in the genome in D. ambigua. At the interspecific level it shows homology to mobile sequences of other species of the obscura group. Although variable in length, these IS elements are characterized by conserved sections without coding function and by 14 bp inverted repeats, one at a terminal, the other at a subterminal position. In situ hybridization revealed that P elements in D. ambigua are restricted to only two euchromatic sites on chromosome elements A and E. This situation resembles that found in Drosophila guanche and Drosophila subobscura where P homologs are clustered at a single site on chromosome element E and where the section corresponding to exon 3 of P elements carries an IS element. The gene sik-hom, which is located at the 5′ side of the D. guanche cluster of P homologs, was used as a marker to examine whether the P element sites on chromosome element E of D. guanche and D. ambigua are homologous. The results suggest that the nested insertions of IS elements into P elements must have occurred independently in the two different lineages.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Springer
    Climate dynamics 14 (1997), S. 17-31 
    ISSN: 1432-0894
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract  The representation of hydrological land surface processes has, so far, been treated inadequately in global models of the atmospheric general circulation (GCMs). In particular the lateral waterflows from the continents into the ocean have been described unsatisfactorily. The aim of this study is to develop a model for the lateral waterflow on the global scale which describes the translation and retention of the lateral discharge as a function of the spatially distributed land surface characteristics that are globally available. Here, global scale refers to the resolution of 0.5° and smaller, corresponding to a typical GCM gridbox area of about 2500 km2. Discharge models need a number of specific input variables that are usually not available from measurements such as runoff and drainage. Therefore, these variables have to be derived from observed data such as precipitation and surface air temperature. For the model development in this study, a new simplified land surface scheme was applied to compute these variables. The discharge from a catchment of approximately the size of a 0.5° gridbox was simulated using several types of models. The intercomparison of the simulated lateral flows of the different models shows that as a minimum a separation between flow processes such as overland flow, baseflow and riverflow is required to yield good discharge simulations. As both the retention and translation of a flow process need to be simulated, a two-parameter model is required for the representation of overland flow and riverflow. For the baseflow, a one-parameter model is sufficient. The resulting model structure is called the hydrological discharge model or HD model. A first parametrization approach was defined using the gridbox characteristics of topography gradient and gridbox length. The skill of the discharge simulation depends not only on the formulations of the model, but also on the precise definition of the boundaries of the model catchments. The sizes and the positioning of the model catchments on the globe were defined by using a river direction file as well as a modified topography dataset. In a first application, the HD model successfully simulated river discharge using runoff and drainage from a five year atmospheric GCM integration (ECHAM4-T42) as input. The annual cycles of the monthly means of the simulated discharge of several large rivers were compared to the observed discharges provided by the Global Runoff Data Centre. The HD model achieves a considerable improvement of the simulated discharge compared to the model which is currently operational at MPI. The improved volume of the discharge is directly related to the definition of more realistic model catchments and the improved timing of the flow is mainly due to the newly introduced separation of the flow processes.
    Type of Medium: Electronic Resource
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  • 8
    ISSN: 1573-6857
    Keywords: alcohol dehydrogenase ; molecular phylogeny ; PCR-screening
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Two distinct P element subfamilies, designated M-type and O-type, reside in the genome of D. bifasciata. PCR-screening of 65 Drosophila species revealed that only D. bifasciata and its closest relative D. imaii possess O-type elements. Outside the genus, O-type elements were detected in Scaptomyza pallida. Restriction analyses show that the general structure of the O-type elements from S. pallida and D. bifasciata is the same. Sequence divergence turned out to be extremely low (0.43%). These results suggest that the O-type subfamily of D. bifasciata has been received by horizontal transfer from an external source, most probably from the genus Scaptomyza, as has been previously suspected for the M-type family. Since the sequence divergence between M-type elements from S. pallida and D. bifasciata is eighteenfold higher than that between O-type elements, two independent intergeneric transfer events have to be postulated. In order to re-examine the taxonomic status of S. pallida, a partial sequence (489 bp) of the Adh gene was analysed. The data clearly prove that S. pallida has to be placed far outside the D. obscura group.
    Type of Medium: Electronic Resource
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  • 9
    Publication Date: 1992-05-01
    Print ISSN: 0027-8424
    Electronic ISSN: 1091-6490
    Topics: Biology , Medicine , Natural Sciences in General
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  • 10
    Publication Date: 2015-02-18
    Description: Activated naive CD4 + T cells are highly plastic cells that can differentiate into various T helper (Th) cell fates characterized by the expression of effector cytokines like IFN- (Th1), IL-4 (Th2) or IL-17A (Th17). Although previous studies have demonstrated that epigenetic mechanisms including DNA demethylation can stabilize effector cytokine expression, a comprehensive analysis of the changes in the DNA methylation pattern during differentiation of naive T cells into Th cell subsets is lacking. Hence, we here performed a genome-wide methylome analysis of ex vivo isolated naive CD4 + T cells, Th1 and Th17 cells. We could demonstrate that naive CD4 + T cells share more demethylated regions with Th17 cells when compared to Th1 cells, and that overall Th17 cells display the highest number of demethylated regions, findings which are in line with the previously reported plasticity of Th17 cells. We could identify seven regions located in Il17a, Zfp362, Ccr6, Acsbg1, Dpp4, Rora and Dclk1 showing pronounced demethylation selectively in ex vivo isolated Th17 cells when compared to other ex vivo isolated Th cell subsets and in vitro generated Th17 cells, suggesting that this unique epigenetic signature allows identifying and functionally characterizing in vivo generated Th17 cells.
    Print ISSN: 0305-1048
    Electronic ISSN: 1362-4962
    Topics: Biology
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