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  • 1
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    Domain separation in the activation of glycogen phosphorylase a (1989)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 1989-08-04
    Description: The crystal structure of glycogen phosphorylase a complexed with its substrates, orthophosphate and maltopentaose, has been determined and refined at a resolution of 2.8 angstroms. With oligosaccaride bound at the glycogen storage site, the phosphate ion binds at the catalytic site and causes the regulatory and catalytic domains to separate with the loss of stabilizing interactions between them. Homotropic cooperativity between the active sites of the allosteric dimer results from rearrangements in isologous contacts between symmetry-related helices in the subunit interface. The conformational changes in the core of the interface are correlated with those observed on covalent activation by phosphorylation at Ser14 (phosphorylase b----a).〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Goldsmith, E J -- Sprang, S R -- Hamlin, R -- Xuong, N H -- Fletterick, R J -- DK31507-05/DK/NIDDK NIH HHS/ -- GM00085-05/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1989 Aug 4;245(4917):528-32.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas 75235.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2756432" target="_blank"〉PubMed〈/a〉
    Keywords: Allosteric Site ; Amino Acid Sequence ; Binding Sites ; Catalysis ; Crystallization ; Crystallography ; Enzyme Activation ; Glucosephosphates/metabolism ; Glycogen/metabolism ; Macromolecular Substances ; Molecular Sequence Data ; Molecular Structure ; Oligosaccharides ; Phosphates/metabolism ; Phosphorylase a/*metabolism ; Phosphorylases/*metabolism ; Protein Conformation ; X-Ray Diffraction
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 2
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    Crystallographic structure of the octameric histone core of the nucleosome at a resolution of 3.3 A (1985)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 1985-05-03
    Description: The structure of the (H2A-H2B-H3-H4)2 histone octamer has been determined by means of x-ray crystallographic techniques at a resolution of 3.3 angstroms. The octamer is a prolate ellipsoid 110 angstroms long and 65 to 70 angstroms in diameter, and its general shape is that of a rugby ball. The size and shape are radically different from those determined in earlier studies. The most striking feature of the histone octamer is its tripartite organization, that is, a central (H3-H4)2 tetramer flanked by two H2A-H2B dimers. The DNA helix, placed around the octamer in a path suggested by the features on the surface of the protein, appears like a spring holding the H2A-H2B dimers at either end of the (H3-H4)2 tetramer.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Burlingame, R W -- Love, W E -- Wang, B C -- Hamlin, R -- Nguyen, H X -- Moudrianakis, E N -- New York, N.Y. -- Science. 1985 May 3;228(4699):546-53.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/3983639" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Chickens ; Chromatin/ultrastructure ; DNA/metabolism ; *Histones/metabolism ; Models, Chemical ; Nucleosomes/*ultrastructure ; Protein Conformation ; X-Ray Diffraction
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 3
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    The three-dimensional structure of Asn102 mutant of trypsin: role of Asp102 in serine protease catalysis (1987)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 1987-08-21
    Description: The structure of the Asn102 mutant of trypsin was determined in order to distinguish whether the reduced activity of the mutant at neutral pH results from an altered active site conformation or from an inability to stabilize a positive charge on the active site histidine. The active site structure of the Asn102 mutant of trypsin is identical to the native enzyme with respect to the specificity pocket, the oxyanion hole, and the orientation of the nucleophilic serine. The observed decrease in rate results from the loss of nucleophilicity of the active site serine. This decreased nucleophilicity may result from stabilization of a His57 tautomer that is unable to accept the serine hydroxyl proton.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sprang, S -- Standing, T -- Fletterick, R J -- Stroud, R M -- Finer-Moore, J -- Xuong, N H -- Hamlin, R -- Rutter, W J -- Craik, C S -- AM26081/AM/NIADDK NIH HHS/ -- AM31507/AM/NIADDK NIH HHS/ -- GM24485/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1987 Aug 21;237(4817):905-9.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/3112942" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Asparagine ; Aspartic Acid ; Binding Sites ; Cattle ; Computer Simulation ; Crystallography ; Histidine ; Hydrogen Bonding ; Hydrogen-Ion Concentration ; Protein Conformation ; Rats ; Serine ; Structure-Activity Relationship ; *Trypsin
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 4
    Electronic Resource
    Electronic Resource
    COMPARATIVE ELECTROCARDIOGRAPHY (1965)
    Oxford, UK : Blackwell Publishing Ltd
    Annals of the New York Academy of Sciences 127 (1965), S. 0 
    Details
    ISSN: 1749-6632
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Natural Sciences in General
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1111/j.1749-6632.1965.tb49400.x
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  • 5
    Electronic Resource
    Electronic Resource
    THE FOURTH HEART SOUND IN THE EQUINE (1965)
    Oxford, UK : Blackwell Publishing Ltd
    Annals of the New York Academy of Sciences 127 (1965), S. 0 
    Details
    ISSN: 1749-6632
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Natural Sciences in General
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1111/j.1749-6632.1965.tb49408.x
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  • 6
    Electronic Resource
    Electronic Resource
    Characteristics of a flat multiwire area detector for protein crystallography (1981)
    Copenhagen : International Union of Crystallography (IUCr)
    Applied crystallography online 14 (1981), S. 85-93 
    Details
    ISSN: 1600-5767
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Geosciences , Physics
    Notes: A flat, relatively thin (9 mm) xenon-filled multiwire proportional counter with two-dimensional, 2 μs delay line readout of a 270 × 300 mm active area has been developed for use as a position-sensitive area X-ray detector in the 8 keV energy region (Cu Kα) used in crystallographic structure work with large biological molecules. Its quantum detection efficiency for 8 keV X-ray photons is about 0.5, a value which is spatially uniform to within ± 2%. Its dead-time loss fraction at a typical data collection rate of 30000 photons s−1 is 12%. The detector has spatial resolution for X-rays of 0.6 mm FWHM in the horizontal direction and 2 mm, the anode wire spacing, in the vertical direction. The effects of parallax are found to be limited and do not seriously increase the apparent size of the diffracted beams. The position sensitivity of this detector is geometrically linear to within 0.5 mm across its active surface. Routine maintenance of the detector requires the attention of a skilled technician but is not time consuming. For four years, this detector has been used to measure millions of reflection intensities from crystals of many different proteins. The down time due to the detector has averaged less than four days per year, considerably less than the down time of other components of the data collection system. Four new protein structures have now been solved using data from this detector. Also, a considerable amount of data have been collected at higher resolution or at different temperatures with crystals of other proteins.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1107/S0021889881008856
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  • 7
    Electronic Resource
    Electronic Resource
    Strategy for data collection from protein crystals using a multiwire counter area detector diffractometer (1985)
    Copenhagen : International Union of Crystallography (IUCr)
    Applied crystallography online 18 (1985), S. 342-350 
    Details
    ISSN: 1600-5767
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Geosciences , Physics
    Notes: A strategy for data collection using a diffractometer equipped with a multiwire proportional counter is described. Data are collected using an electronic rotation method similar to an earlier developed `still' method. Data are collected as a set of three to 12 or more `runs'. A data collection `run' consists of a consecutive series of hundreds of electronic rotation pictures with ω advanced by a specific amount (from 0.07 to 0.20°, depending on the mosaicity of the crystal) during each picture. Every picture in a run is taken at the same: χ and φ setting angles and exposure time. Information on how to extract the intensity data from these electronic rotation pictures is given elsewhere. Here, the only concern is how to choose a set of ω, χ and φ angles for defining a set of runs in order to get a complete set of data in a minimum time. First the diffraction geometry is discussed, then the strategy is outlined; finally, some examples are given to illustrate how the strategy is used in some typical protein data collection problems.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1107/S0021889885010433
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  • 8
    Electronic Resource
    Electronic Resource
    The electron stationary picture method for high-speed measurement of reflection intensities from crystals with large unit cells (1978)
    [S.l.] : International Union of Crystallography (IUCr)
    Acta crystallographica 34 (1978), S. 289-296 
    Details
    ISSN: 1600-5724
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: A method for measuring X-ray intensity data from crystals with large unit ceils is presented. The method takes full advantage of the capabilities of the multiwire area detector diffractometer. This diffractometer is a high-speed data collection system utilizing a multiwire proportional chamber that can detect photons from all simultaneously occurring reflections and record the diffraction pattern as a two-dimensional histogram in a computer mass core memory. In the electronic stationary picture method of data collection, reflection intensities are extracted from a sequence of electronic pictures each of which is exposed while the crystal is stationary. Between successive pictures the crystal is rotated about a fixed axis by a small constant angle of approximately 0.05°. Because the integrated intensity of each reflection is extracted from several consecutive pictures, advance prediction of detector coordinates and picture number is required for all reflections and the data-extraction computer program is necessarily complex. Expressions are derived for reflection detector coordinates and setting angles, the system hardware and software are described, the data collection procedure is outlined, and the quality of 7 × 105 reflection intensities measured during six months of operation is analyzed.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1107/S0567739478000546
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  • 9
    Electronic Resource
    Electronic Resource
    Use of the multiwire area detector diffractometer as a national resource for protein crystallography (1985)
    Copenhagen : International Union of Crystallography (IUCr)
    Acta crystallographica 41 (1985), S. 267-269 
    Details
    ISSN: 1600-5740
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1107/S0108768185002105
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  • 10
    Electronic Resource
    Electronic Resource
    A multiwire proportional chamber as an area detector for protein crystallography (1974)
    Copenhagen : International Union of Crystallography (IUCr)
    Applied crystallography online 7 (1974), S. 319-323 
    Details
    ISSN: 1600-5767
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Geosciences , Physics
    Notes: A multiwire proportional chamber (30 × 30 cm) together with its electronic readout into a large core memory (mass core) has been used successfully as a digital area detector for protein crystallography. The diffraction pattern stored in the mass core can be displayed on a TV monitor. An IBM 1800 computer has fast random access to the mass core and is used on line to estimate the integrated reflection intensities. To characterize this new area detector, the geometric linearity, the resolution and the quantum detection uniformity have been measured. Preliminary results show that with this new system one can collect intensity data from protein crystals about an order of magnitude faster than with the standard diffractometer.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1107/S0021889874009757
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