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  • 1
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    Springer Science and Business Media LLC
    In:  Marine Biodiversity vol. 53 no. 77
    Publication Date: 2024-01-12
    Description: There is a lack of standardised imaging methods for marine zooplankton due to the difficulty of manipulating small and often fragile specimens. Yet, standardised 2D photographs and 3D scans provide important morphological information to accompany DNA-barcoded specimens for reference databases such as the Barcode of Life Data System (BOLD). Shelled pteropods are considered as bio-indicators to study impacts of ocean acidification, and thus, it is especially important to obtain high-quality records of their fragile aragonitic shells. We used alcohol-based hand sanitiser gel as a medium for photographing pteropods of the genus Limacina prior to micro-CT scanning and destructive DNA analysis. The high viscosity and transparency of the hand sanitiser enabled easy handling of the specimens so that they could be positioned in a standardised orientation and photographed with a stacking microscope. The high-quality photographs provide a record of morphology and allow for subsequent geometric morphometric analyses. This method did not impact the downstream micro-CT and molecular analyses of the same specimens and resulted in publicly available 2D and 3D digital vouchers as well as ten reference DNA barcodes (partial Cytochrome Oxidase I gene sequences). While alcohol-based hand sanitiser entered our daily lives due to a distressing pandemic, we could make use of it as a cheap and easily available resource to make high quality voucher photographs of shelled pteropods. Digital vouchers serve as a record of their morphology for further taxonomic analyses and facilitate studies assessing shell growth and impacts of ocean acidification.
    Keywords: Integrative taxonomy ; Limacina ; Digital vouchers ; DNA barcoding ; Marine zooplankton
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 2
    Publication Date: 2024-01-12
    Description: The giant barrel sponge Xestospongia testudinaria is an ecologically important species that is widely distributed across the Indo-Pacific. Little is known, however, about the precise biogeographic distribution and the amount of morphological and genetic variation in this species. Here we provide the first detailed, fine-scaled (〈200 km2) study of the morphological and genetic composition of X. testudinaria around Lembeh Island, Indonesia. Two mitochondrial (CO1 and ATP6 genes) and one nuclear (ATP synthase \xce\xb2 intron) DNA markers were used to assess genetic variation. We identified four distinct morphotypes of X. testudinaria around Lembeh Island. These morphotypes were genetically differentiated with both mitochondrial and nuclear markers. Our results indicate that giant barrel sponges around Lembeh Island, which were all morphologically identified as X. testudinaria, consist of at least two different lineages that appear to be reproductively isolated. The first lineage is represented by individuals with a digitate surface area, CO1 haplotype C5, and is most abundant around the harbor area of Bitung city. The second lineage is represented by individuals with a predominantly smooth surface area, CO1 haplotype C1 and can be found all around Lembeh Island, though to a lesser extent around the harbor of Bitung city. Our findings of two additional unique genetic lineages suggests the presence of an even broader species complex possibly containing more than two reproductively isolated species. The existence of X. testudinaria as a species complex is a surprising result given the size, abundance and conspicuousness of the sponge.
    Keywords: Xestospongia testudinaria ; Indo-Pacific ; DNA ; genetic composition ; sponge
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 3
    Publication Date: 2024-01-12
    Description: Molecular studies of marine plankton have shown that ecological and/or environmental barriers play an important role in separating populations. Calanoid copepods are central in marine ecosystems, and dramatic biogeographical shifts in copepod assemblages associated with recent climate warming have been reported. We examined spatial population structuring in European waters of the Atlantic Ocean and Mediterranean Sea of Calanus helgolandicus and its sister species, C. euxi nus, from the Black Sea based on genetic and morphometric characters. The aims were to identify barriers to dispersal, relate these to hydrographic characteristics and infer historical patterns of distribution and demography. We analysed a 408 bp fragment of the mitochondrial 16S gene (316 individuals), prosome to urosome length relationships (212 individuals) and sea surface temperatures obtained from 19 European sites. Estimates of genetic differentiation between samples and hierarchical analyses of molecular variance indicated strong spatial population structuring between, as well as within, basins. We identified 7 phylogeographic groups: Fjords, Oceanic inflow, NE Atlantic/ Tyrrhenian, Adriatic, Mljet Island, Aegean, and Black Sea, which explained 39.7% of the total genetic variation. Based on genetic data, C. euxinus is considered to be a differentiated population within the C. helgolandicus distribution range because the most important genetic barrier separates western and eastern Mediterranean populations. Morphometric barriers largely reflect sea surface temperature barriers and are not congruent with the main genetic barriers. Contrary to recent findings for C. finmarchicus, we conclude that C. helgolandicus/C. euxinus populations are not connected by high levels of dispersal and have been vulnerable to past climatic changes.
    Keywords: Calanus helgolandicus ; Calanus euxinus ; 16S rDNA ; Mediterranean Sea ; North Atlantic Ocean ; Black Sea
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 4
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    In:  Ecology and Evolution vol. 3 no. 8, pp. 2765-2781
    Publication Date: 2024-01-12
    Description: Open ocean zooplankton often have been viewed as slowly evolving species that have limited capacity to respond adaptively to changing ocean conditions. Hence, attention has focused on the ecological responses of zooplankton to current global change, including range shifts and changing phenology. Here, we argue that zooplankton also are well poised for evolutionary responses to global change. We present theoretical arguments that suggest plankton species may respond rapidly to selection on mildly beneficial mutations due to exceptionally large population size, and consider the circumstantial evidence that supports our inference that selection may be particularly important for these species. We also review all primary population genetic studies of open ocean zooplankton and show that genetic isolation can be achieved at the scale of gyre systems in open ocean habitats (100s to 1000s of km). Furthermore, population genetic structure often varies across planktonic taxa, and appears to be linked to the particular ecological requirements of the organism. In combination, these characteristics should facilitate adaptive evolution to distinct oceanographic habitats in the plankton. We conclude that marine zooplankton may be capable of rapid evolutionary as well as ecological responses to changing ocean conditions, and discuss the implications of this view. We further suggest two priority areas for future research to test our hypothesis of high evolutionary potential in open ocean zooplankton, which will require (1) assessing how pervasive selection is in driving population divergence and (2) rigorously quantifying the spatial and temporal scales of population differentiation in the open ocean.
    Keywords: adaptation ; climate change ; marine ; oceanic ; selection ; zooplankton
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 5
    Publication Date: 2024-01-12
    Description: The existence of multiple independently derived populations in landlocked marine lakes provides an opportunity for fundamental research into the role of isolation in population divergence and speciation in marine taxa. Marine lakes are landlocked water bodies that maintain a marine character through narrow submarine connections to the sea and could be regarded as the marine equivalents of terrestrial islands. The sponge Suberites diversicolor (Porifera: Demospongiae: Suberitidae) is typical of marine lake habitats in the Indo-Australian Archipelago. Four molecular markers (two mitochondrial and two nuclear) were employed to study genetic structure of populations within and between marine lakes in Indonesia and three coastal locations in Indonesia, Singapore and Australia. Within populations of S. diversicolor two strongly divergent lineages (A & B) (COI: p = 0.4% and ITS: p = 7.3%) were found, that may constitute cryptic species. Lineage A only occurred in Kakaban lake (East Kalimantan), while lineage B was present in all sampled populations. Within lineage B, we found low levels of genetic diversity in lakes, though there was spatial genetic population structuring. The Australian population is genetically differentiated from the Indonesian populations. Within Indonesia we did not record an East-West barrier, which has frequently been reported for other marine invertebrates. Kakaban lake is the largest and most isolated marine lake in Indonesia and contains the highest genetic diversity with genetic variants not observed elsewhere. Kakaban lake may be an area where multiple putative refugia populations have come into secondary contact, resulting in high levels of genetic diversity and a high number of endemic species.
    Keywords: Suberites diversicolor ; Indo-Australian Archipelago ; marine lakes ; evolution
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 6
    Publication Date: 2024-01-12
    Description: This paper reviews the quantitative morphological variation published for Sagitta setosa M\xc3\xbcller, 1847 and two other species described within the S. serosa-complex, viz., S. euxina Moltschanoff, 1909 from the Black Sea, and S. batava Biersteker & Van der Spoel, 1966 from the Scheldt Estuary (Netherlands). Data on total (body) length, caudal length, numbers of teeth and hooks, ovary length, and dimensions of fins are compared between these three taxa. Additionally, samples from the North Sea, Mediterranean, and Black Sea are compared to look for geographic differences. Specimens from the Mediterranean were smallest with relatively long caudal segments, and few teeth and hooks, whereas specimens from the Black Sea were largest with relatively short caudal segments and many teeth and hooks. Specimens from the North Sea were intermediate with regards to these characters, but ranges overlapped and there were no obvious differences in allometry. These differences may be ecophenotypic, as the warm and salty Mediterranean Sea and cool and brackish Black Sea are at opposite ends of the environmental spectrum. The dimensions related to the fins showed clearer distinction between samples from different geographical areas, and slight differences in allometry. However, few data were available and little is known about the variance within each geographical area. We found more variation in quantitative characters within S. setosa from different parts of its range than between S. setosa and either S. hatava, or S. euxina. Sagitta batava conformed to S. setosa in terms of all the morphological characters considered. The data for S. setosa derived from Biersteker & Van der Spoel (1966) were atypical and were found to be based on misidentifications of S. elegans. Therefore, we concluded that S. batava cannot be considered a separate taxon. For S. euxina, the data were inconclusive. Quantitative data completely overlapped between S. setosa from the Black Sea and S. euxina, but few data of S. setosa from the Black Sea were available. Because samples were either composed entirely of S. setosa or S. euxina (depending on sampling season and depth) and there was a large variation in body lengths and relative ovary lengths, we consider it possible that these samples represent seasonal variants of one and the same species.
    Keywords: Sagitta setosa ; Chaetognatha ; morphological variation ; European seas
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 7
    Publication Date: 2024-01-12
    Description: The genus Protatlanta is thought to be monotypic and is part of the Atlantidae, a family of shelled heteropods. These microscopic planktonic gastropods are poorly known, although research on their ecology is now increasing in response to concerns about the effects of ocean acidification on calcareous plankton. A correctly implemented taxonomy of the Atlantidae is fundamental to this progressing field of research and it requires much attention, particularly using integrated molecular and morphological techniques. Here we use DNA barcoding, shell morphology and biogeography to show that the genus Protatlanta includes at least two valid species in the Atlantic Ocean. Protatlanta souleyeti and Protatlanta sculpta were found to be separate species, with different shell morphology and separated by a K2P genetic distance of 19% sequence divergence at the Cytochrome Oxidase 1 gene. This evidence supports the revival of the species name P. sculpta, which was described by Issel in 1911, but has not been recognised as a valid species since 1915.
    Keywords: Atlantic Ocean ; biogeography ; DNA barcoding ; morphometrics ; Protatlanta ; shelled heteropod
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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    Format: application/vnd.ms-excel
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