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  • 1
    Publication Date: 1989-03-10
    Description: The x-ray crystal structure of recombinant human renin has been determined. Molecular dynamics techniques that included crystallographic data as a restraint were used to improve an initial model based on porcine pepsinogen. The present agreement factor for data from 8.0 to 2.5 angstroms (A) is 0.236. Some of the surface loops are poorly determined, and these disordered regions border a 30 A wide solvent channel. Comparison of renin with other aspartyl proteinases shows that, although the structural cores and active sites are highly conserved, surface residues, some of which are critical for specificity, vary greatly (up to 10A). Knowledge of the actual structure, as opposed to the use of models based on related enzymes, should facilitate the design of renin inhibitors.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sielecki, A R -- Hayakawa, K -- Fujinaga, M -- Murphy, M E -- Fraser, M -- Muir, A K -- Carilli, C T -- Lewicki, J A -- Baxter, J D -- James, M N -- New York, N.Y. -- Science. 1989 Mar 10;243(4896):1346-51.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry, University of Alberta, Edmonton, Canada.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2493678" target="_blank"〉PubMed〈/a〉
    Keywords: Aspartic Acid Endopeptidases ; Cardiovascular Agents/pharmacology ; Endopeptidases/metabolism ; Humans ; Models, Molecular ; Pepsin A/metabolism ; Protein Conformation ; *Recombinant Proteins/metabolism ; *Renin/metabolism
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2013-08-02
    Description: Prion infections cause lethal neurodegeneration. This process requires the cellular prion protein (PrP(C); ref. 1), which contains a globular domain hinged to a long amino-proximal flexible tail. Here we describe rapid neurotoxicity in mice and cerebellar organotypic cultured slices exposed to ligands targeting the alpha1 and alpha3 helices of the PrP(C) globular domain. Ligands included seven distinct monoclonal antibodies, monovalent Fab1 fragments and recombinant single-chain variable fragment miniantibodies. Similar to prion infections, the toxicity of globular domain ligands required neuronal PrP(C), was exacerbated by PrP(C) overexpression, was associated with calpain activation and was antagonized by calpain inhibitors. Neurodegeneration was accompanied by a burst of reactive oxygen species, and was suppressed by antioxidants. Furthermore, genetic ablation of the superoxide-producing enzyme NOX2 (also known as CYBB) protected mice from globular domain ligand toxicity. We also found that neurotoxicity was prevented by deletions of the octapeptide repeats within the flexible tail. These deletions did not appreciably compromise globular domain antibody binding, suggesting that the flexible tail is required to transmit toxic signals that originate from the globular domain and trigger oxidative stress and calpain activation. Supporting this view, various octapeptide ligands were not only innocuous to both cerebellar organotypic cultured slices and mice, but also prevented the toxicity of globular domain ligands while not interfering with their binding. We conclude that PrP(C) consists of two functionally distinct modules, with the globular domain and the flexible tail exerting regulatory and executive functions, respectively. Octapeptide ligands also prolonged the life of mice expressing the toxic PrP(C) mutant, PrP(Delta94-134), indicating that the flexible tail mediates toxicity in two distinct PrP(C)-related conditions. Flexible tail-mediated toxicity may conceivably play a role in further prion pathologies, such as familial Creutzfeldt-Jakob disease in humans bearing supernumerary octapeptides.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sonati, Tiziana -- Reimann, Regina R -- Falsig, Jeppe -- Baral, Pravas Kumar -- O'Connor, Tracy -- Hornemann, Simone -- Yaganoglu, Sine -- Li, Bei -- Herrmann, Uli S -- Wieland, Barbara -- Swayampakula, Mridula -- Rahman, Muhammad Hafizur -- Das, Dipankar -- Kav, Nat -- Riek, Roland -- Liberski, Pawel P -- James, Michael N G -- Aguzzi, Adriano -- England -- Nature. 2013 Sep 5;501(7465):102-6. doi: 10.1038/nature12402. Epub 2013 Jul 31.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Neuropathology, University Hospital Zurich, Schmelzbergstrasse 12, CH-8091 Zurich, Switzerland.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/23903654" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; Antibodies/*immunology/*toxicity ; Antibodies, Monoclonal/immunology/toxicity ; Binding Sites, Antibody ; Calpain/metabolism ; Cerebellum ; Creutzfeldt-Jakob Syndrome/metabolism ; Cross-Linking Reagents ; Epitope Mapping ; Female ; Immunoglobulin Fab Fragments/immunology/toxicity ; In Vitro Techniques ; Ligands ; Male ; Membrane Glycoproteins/metabolism ; Mice ; Molecular Sequence Data ; NADPH Oxidase/metabolism ; Neurodegenerative Diseases/metabolism ; Oxidative Stress ; *Pliability ; PrPC Proteins/chemistry/genetics/immunology ; Prions/*chemistry/genetics/*immunology ; Reactive Oxygen Species/metabolism ; Sequence Deletion/genetics ; Single-Chain Antibodies/immunology/toxicity
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 3
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Journal of medicinal chemistry 14 (1971), S. 670-675 
    ISSN: 1520-4804
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1520-4995
    Source: ACS Legacy Archives
    Topics: Biology , Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Biochemistry 26 (1987), S. 261-269 
    ISSN: 1520-4995
    Source: ACS Legacy Archives
    Topics: Biology , Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 6
    ISSN: 1520-5126
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Palo Alto, Calif. : Annual Reviews
    Annual Review of Biochemistry 58 (1989), S. 951-999 
    ISSN: 0066-4154
    Source: Annual Reviews Electronic Back Volume Collection 1932-2001ff
    Topics: Chemistry and Pharmacology , Biology
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Fatigue & fracture of engineering materials & structures 19 (1996), S. 0 
    ISSN: 1460-2695
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Notes: Abstract— Constant and variable amplitude (VA) loading fatigue studies were carried out on a 6261 aluminium alloy using cylindrical plain hour-glass specimens. Crack growth was monitored via surface replication using cellulose acetate.Crack growth results at constant amplitude loading show the typical intermittent high and low periods of growth rate associated with crack-microstructure interactions. Acceleration in growth rate during an overload block depends on crack length and stress amplitude ratio. It appears to pass through a maximum at a crack length corresponding to the first microstructural barrier. Microstructural-based modelling is therefore required for small fatigue cracks, rather than solely closure-based modelling. The Navarro-de los Rios model of short fatigue crack growth appears able to provide good indications of crack growth rates under VA block loading, and gives reasonable life predictions.For short cracks (surface length 〈 80 μm) and a small overload ratio (6.7%), crack growth may show severe retardation during the overload block. This is ascribed to crack tip blunting being more important than the increase in stresses when closure is low. It appears from a Miner's rule type exercise, that VA block loading has its major effect on growth at a surface crack length of 20 μm. This means that the crack initiation period cannot be ignored in life prediction models for small fatigue cracks.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    PO Box 1354, 9600 Garsington Road, Oxford OX4 2XG, UK. : Blackwell Science Ltd
    Fatigue & fracture of engineering materials & structures 27 (2004), S. 0 
    ISSN: 1460-2695
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Notes: This paper presents two-dimensional information on the residual stresses in 8 mm 5383-H321 aluminium plates joined by double pass (DP) friction stir welding (FSW). It considers the inherent variability in residual stress magnitudes along 0.5 m lengths of weld pass, and their modification under a sequence of applied fatigue loads. This represents one of a planned series of experiments aimed at illuminating the effects of fatigue cycling on residual stress fields. In this particular case, the magnitudes of the bending fatigue loads (R= 0.1) were chosen to correlate with the measured proof strengths of the weld metal (approximately 160 MPa) and the parent plate (approximately 260–270 MPa). In four-point bend S–N tests at R= 0.1 on 40 mm wide FS welded specimens of this alloy and plate thickness, these peak stress levels correspond to lives of around 105 cycles and 107 cycles, respectively. Results from the work indicate that significant variability exists among welded plates in peak compressive stress magnitudes (a range of perhaps −50 MPa to −140 MPa), although peak tensile stresses were relatively low and more consistent (from around 0 to 30 MPa). Fatigue loading accentuates the peak-to-valley stress change and causes an overall translation of the stresses to become more positive. Peak tensile stresses increase several-fold during fatigue cycling.
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Fatigue & fracture of engineering materials & structures 19 (1996), S. 0 
    ISSN: 1460-2695
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Notes: Abstract —The load interaction effects that occur under variable amplitude loading conditions following single peak overloads, low-high blocks and high-low blocks have been investigated on a commonly used structural steel. A detailed investigation has been carried out on long cracks which aims at developing and assessing the efficacy of a simple predictive model based on closure and plastic zone effects.The material was tested in a quenched and tempered condition. All the tests were carried out in the four point bending mode, in both the Paris regime and near the threshold, with overloads ranging from 10% to 100%.An attempt to relate crack closure to crack growth rates in the transient growth rate region (which follows a load change) was made.The trends observed for a wide range of loading parameters are presented.
    Type of Medium: Electronic Resource
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