Publication Date:
2014-12-06
Description:
Background and purpose: Chronic myeloproliferative neoplasms (MPN) may transform into secondary acute myeloid leukemia (sAML). The genetic evolution pattern is important in understanding the pathogenesis of sAML transformation. We aimed to determine the profile of genetic evolution by examining a cohort of paired samples collected at both MPN and sAML phases using a panel of commonly mutated genes involved in myeloid neoplasms. Methods: Mutational analyses of 14 genes (JAK2V617F, CALR, ASXL1, IDH1, IDH2, TET2, DNMT3A, EZH2, KRAS, RUNX1, TP53, WT1, CBL, and SRSF2) were performed on the paired matched samples at diagnosis and at sAML transformation from 22 patients with MPN (6 polycythemia vera, 5 essential thrombocythemia, and 11 primary myelofibrosis). The samples were analyzed by polymerase chain reaction (PCR)-based assays followed by direct sequencing. For CALRmutational analysis, the PCR products of exon 9 were analyzed by GeneScan for screening deletions and insertions, then validated by Sanger sequencing. The allele frequencies of all mutated genes were determined by pyrosequencing assays in samples harboring any detectable mutations. Results: At the MPN phase, JAK2V617F was the most common mutation (N=12), followed by CALR (N=9). At sAML phase, JAK2V617F was not detected in 4 patients who had JAK2V617F at initial diagnosis while all 9 patients retained CALR mutations. Mutations of epigenetic modifier genes were detected in 13 patients (59%) at MPN phase, including TET2 (N=5), EZH2 (N=4), ASXL1 (N=2), DNMT3A (N=2), IDH1 and IDH2 (N=1 for each). One MPN sample was also found carrying RUNX1 mutation. Acquisition of 12 mutations was found in 11 patients at the sAML phase, including RUNX1 (N=4), KRAS (N=3), IDH2 (N=2), and one each of CBL, ASXL1 and TP53. Except JAK2V617F and TET2 mutations, the mutations present in the MPN phase remained detectable at sAML transformation. The allele frequencies of IDH2 and EZH2 mutant clones were apparently increased at sAML phase. Of note, two patients had double TET2 mutations at the MPN phase, clonal selection of TET2 mutants was explicitly demonstrated in both cases, with disappearance of one clone and expansion of the other during sAML transformation. The median time from MPN to sAML was 71.6 months and the median overall survival was 73.2 months for the cohort of MPN patients who had sAML transformation later on. Female patients had a trend towards lower incidence of CALR mutation (2/11 vs. 7/11, P=0.08) and significantly shorter overall survival (43.3 vs. 129.2 months, P
Print ISSN:
0006-4971
Electronic ISSN:
1528-0020
Topics:
Biology
,
Medicine
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