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  • 1
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    Unknown
    PANGAEA
    In:  Supplement to: Price, Nichole N; Hamilton, Scott L; Tootell, Jesse S; Smith, Jennifer E (2011): Species-specific consequences of ocean acidification for the calcareous tropical green algae Halimeda. Marine Ecology Progress Series, 440, 67-78, https://doi.org/10.3354/meps09309
    Publication Date: 2023-07-05
    Description: Ocean acidification (OA), resulting from increasing dissolved carbon dioxide (CO2) in surface waters, is likely to affect many marine organisms, particularly those that calcify. Recent OA studies have demonstrated negative and/or differential effects of reduced pH on growth, development, calcification and physiology, but most of these have focused on taxa other than calcareous benthic macroalgae. Here we investigate the potential effects of OA on one of the most common coral reef macroalgal genera,Halimeda. Species of Halimeda produce a large proportion of the sand in the tropics and are a major contributor to framework development on reefs because of their rapid calcium carbonate production and high turnover rates. On Palmyra Atoll in the central Pacific, we conducted a manipulative bubbling experiment to investigate the potential effects of OA on growth, calcification and photophysiology of 2 species of Halimeda. Our results suggest that Halimeda is highly susceptible to reduced pH and aragonite saturation state but the magnitude of these effects is species specific. H. opuntiasuffered net dissolution and 15% reduction in photosynthetic capacity, while H. taenicola did not calcify but did not alter photophysiology in experimental treatments. The disparate responses of these species to elevated CO2 partial -pressure (pCO2) may be due to anatomical and physiological differences and could represent a shift in their relative dominance in the face of OA. The ability for a species to exert biological control over calcification and the species specific role of the carbonate skeleton may have important implications for the potential effects of OA on ecological function in the future.
    Keywords: Benthos; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Chlorophyta; Coast and continental shelf; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Halimeda opuntia; Halimeda taenicola; Laboratory experiment; Macroalgae; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Plantae; Primary production/Photosynthesis; Single species; Temperate
    Type: Dataset
    Format: application/zip, 2 datasets
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  • 2
    Publication Date: 2024-03-15
    Keywords: Alkalinity, total; Aragonite saturation state; Benthos; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chlorophyta; Coast and continental shelf; DATE/TIME; DEPTH, water; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Halimeda opuntia; Halimeda taenicola; Laboratory experiment; LATITUDE; LONGITUDE; Macroalgae; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Plantae; Potentiometric open-cell titration; Salinity; Single species; Site; SOMMA autoanalyzer; Temperate; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 273 data points
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  • 3
    Publication Date: 2024-03-15
    Keywords: Alkalinity, total; Alkalinity, total, standard error; Aragonite saturation state; Aragonite saturation state, standard deviation; Benthos; Bicarbonate ion; Bicarbonate ion, standard error; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Buoyant weighing technique according to Davies (1989); Calcification/Dissolution; Calcification rate of calcium carbonate; Calcite saturation state; Calcite saturation state, standard deviation; Calculated; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard error; Carbonate ion; Carbonate ion, standard error; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard error; Chlorophyta; Coast and continental shelf; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Halimeda opuntia; Halimeda opuntia, segements lost; Halimeda opuntia, weight, dry; Halimeda opuntia tips; Halimeda taenicola; Halimeda taenicola, segements lost; Halimeda taenicola, weight, dry; Halimeda taenicola tips; Initial slope of rapid light curve; Laboratory experiment; Macroalgae; Maximal electron transport rate, relative; PAM (PhytoPAM, Phyto-ED Walz, PPAA0138); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; pH; pH, standard error; Photoinhibition; Plantae; Potentiometric open-cell titration; Primary production/Photosynthesis; Ratio; Salinity; Salinity, standard error; see reference(s); Shed rate; Single species; SOMMA autoanalyzer; Species; Temperate; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 672 data points
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  • 4
    Publication Date: 2024-03-15
    Description: Understanding species' responses to upwelling may be especially important in light of ongoing environmental change. Upwelling frequency and intensity are expected to increase in the future, while ocean acidification and deoxygenation are expected to decrease the pH and dissolved oxygen of upwelled waters. However, the acute effects of a single upwelling event and the integrated effects of multiple upwelling events on marine organisms are poorly understood. Here, we use in situ measurements of pH, temperature, and dissolved oxygen to characterize the covariance of environmental conditions within upwelling-dominated kelp forest ecosystems. We then test the effects of acute (0-3 days) and chronic (1-3 month) upwelling on the performance of two species of kelp forest grazers, the echinoderm, Mesocentrotus franciscanus, and the gastropod, Promartynia pulligo. We exposed organisms to static conditions in a regression design to determine the shape of the relationship between upwelling and performance and provide insights into the potential effects in a variable environment. We found that respiration, grazing, growth, and net calcification decline linearly with increasing upwelling intensity for M. francicanus over both acute and chronic timescales. Promartynia pulligo exhibited decreased respiration, grazing, and net calcification with increased upwelling intensity after chronic exposure, but we did not detect an effect over acute timescales or on growth after chronic exposure. Given the highly correlated nature of pH, temperature, and dissolved oxygen in the California Current, our results suggest the relationship between upwelling intensity and growth in the 3-month trial could potentially be used to estimate growth integrated over long-term dynamic oceanographic conditions for M. franciscanus. Together, these results indicate current exposure to upwelling may reduce species performance and predicted future increases in upwelling frequency and intensity could affect ecosystem function by modifying the ecological roles of key species.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Behaviour; Benthic animals; Benthos; Bicarbonate ion; Buoyant mass; Calcification/Dissolution; Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); DATE/TIME; Echinodermata; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Grazing rate; Growth/Morphology; Identification; Laboratory experiment; LATITUDE; LONGITUDE; Mesocentrotus franciscanus; Method comment; Mollusca; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Oxygen; Oxygen, dissolved; Oxygen, dissolved, standard deviation; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Potentiometric titration; Principal component 1; Principal component 2; Respiration; Respiration rate, oxygen; Salinity; Salinity, standard deviation; Sample elevation; Sample ID; Single species; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Spectrophotometric; Tegula pulligo; Temperate; Temperature; Temperature, water; Temperature, water, standard deviation; Time in days; Treatment; Type; Wet mass
    Type: Dataset
    Format: text/tab-separated-values, 69718 data points
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  • 5
    Publication Date: 2024-03-15
    Description: Ocean acidification (OA) is likely to differentially affect the biology and physiology of calcifying and non-calcifying taxa, thereby potentially altering key ecological interactions (e.g., facilitation, competition, predation) in ways that are difficult to predict from single-species experiments. We used a two-factor experimental design to investigate how multispecies benthic assemblages in southern California kelp forests respond to OA and grazing by the purple sea urchin, Strongylocentrotus purpuratus. Settlement tiles accrued natural mixed assemblages of algae and invertebrates in a kelp forest off San Diego, CA for one year before being exposed to OA and grazing in a laboratory experiment for two months. Space occupying organisms were identified and pooled into six functional groups: calcified invertebrates, non-calcified invertebrates, calcified algae, fleshy algae, sediment, and bare space for subsequent analyses of community structure. Interestingly, communities that developed on separate tile racks were unique, despite being deployed close in space, and further changes in community structure in response to OA and grazing depended on this initial community state. On Rack 1, we found significant effects of both pCO2 and grazing with elevated pCO2 increasing cover of fleshy algae, but sea urchin grazers decreasing cover of fleshy algae. On Rack 2, we found a 35% higher percent cover of sediment on tiles reared in ambient pCO2 but observed 27% higher cover of bare space in the high pCO2 conditions. On Rack 3, we found an average of 45% lower percent cover of calcified sessile invertebrates at ambient pCO2 than in high pCO2 treatments on Rack 3. Net community calcification was 137% lower in elevated pCO2 treatments. Kelp sporophyte densities on tiles without urchins were 74% higher than on tiles with urchins and kelp densities were highest in the elevated pCO2 treatment. Urchin growth and grazing rates were 49% and 126% higher under ambient than high pCO2 conditions. This study highlights consistent negative impacts of OA on community processes such as calcification and grazing rates, even though impacts on community structure were highly context-dependent.
    Keywords: Alkalinity, total; Aragonite saturation state; Behaviour; Benthos; Bicarbonate ion; Calcification/Dissolution; Calcification rate; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; Community composition and diversity; Coverage; Dry mass; Entire community; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Grazing rate; Identification; Individuals; Laboratory experiment; Mesocosm or benthocosm; Mias_Reef; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Other; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Potentiometric; Potentiometric titration; Rocky-shore community; Salinity; Temperate; Temperature, water; Treatment; Type
    Type: Dataset
    Format: text/tab-separated-values, 1598 data points
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  • 6
    Publication Date: 2024-03-20
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Bicarbonate ion; Bicarbonate ion, standard deviation; Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Calculated using seacarb after Orr et al. (2018); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Chordata; Citrate synthase activity, unit per protein mass; Citrate synthase activity/lactate dehydrogenase activity; Citrate synthase activity per fresh mass; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); EXP; Experiment; Fish, standard length; Fish, total length; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Fugacity of carbon dioxide in seawater, standard deviation; Growth/Morphology; Identification; Laboratory experiment; Lactate dehydrogenase; Lactate dehydrogenase activity, unit per protein mass; Mass; Nekton; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Other metabolic rates; Oxygen; Oxygen, dissolved; Oxygen, dissolved, standard deviation; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Position; Potentiometric titration; Registration number of species; Salinity; Sebastes mystinus; Single species; Species; Spectrophotometric; Stillwater_Cove; Temperate; Temperature, water; Temperature, water, standard deviation; Time point, descriptive; Treatment; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 5083 data points
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  • 7
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Environmental science & technology 6 (1972), S. 580-580 
    ISSN: 1520-5851
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology , Energy, Environment Protection, Nuclear Power Engineering
    Type of Medium: Electronic Resource
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  • 8
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    Unknown
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-04
    Description: Dataset: Rockfish hypoxia experiments
    Description: This study investigated the effects of hypoxia on the behavior and physiology of juvenile rockfishes in a controlled laboratory setting to test how deoxygenation may impact early life stages of common temperate reef fishes. Juvenile rockfishes were collected from shallow rocky reef and kelp forest habitats at Stillwater Cove, central California (36˚ 34' N, 121˚ 56' W) during May-June of 2015. Newly settled copper (Sebastes caurinus) and blue (Sebastes mystinus) rockfish were reared in the laboratory under across a range of oxygen concentrations. Juvenile rockfishes were exposed to one of four dissolved oxygen treatment levels corresponding to conditions that currently occur or are predicted to occur in the future on the central California coast: 100% saturation (8.74 ± 0.03 mg O2 L-1), 68% saturation (6.00 ± 0.04 mg O2 L-1), 46% saturation (4.06 ± 0.04 mg O2 L-1), or 26% saturation (2.25 ± 0.05 mg O2 L-1), with two replicate tanks per treatment level. Behavior and physiological trials were conducted on each individual to test how each species responds to declining oxygen levels, including (1) escape response, (2) behavioral lateralization, (3) standard metabolic rate, (4) maximum metabolic rate, (5) aerobic scope, (6) pCrit (i.e., hypoxia tolerance test), and (7) ventilation rate. These data are published in Mattiasen et al. (2020). For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/809321
    Description: NSF Emerging Frontiers Division (NSF EF) EF-1416895
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 9
    Publication Date: 2022-10-04
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Sandin, S. A., Alcantar, E., Clark, R., de Leon, R., Dilrosun, F., Edwards, C. B., Estep, A. J., Eynaud, Y., French, B. J., Fox, M. D., Grenda, D., Hamilton, S. L., Kramp, H., Marhaver, K. L., Miller, S. D., Roach, T. N. F., Seferina, G., Silveira, C. B., Smith, J. E., Zgliczynski, B. J., & Vermeij, M. J. A. Benthic assemblages are more predictable than fish assemblages at an island scale. Coral Reefs, 41, (2022.): 1031–1043, https://doi.org/10.1007/s00338-022-02272-5.
    Description: Decades of research have revealed relationships between the abundance of coral reef taxa and local conditions, especially at small scales. However, a rigorous test of covariation requires a robust dataset collected across wide environmental or experimental gradients. Here, we surveyed spatial variability in the densities of major coral reef functional groups at 122 sites along a 70 km expanse of the leeward, forereef habitat of Curaçao in the southern Caribbean. These data were used to test the degree to which spatial variability in community composition could be predicted based on assumed functional relationships and site-specific anthropogenic, physical, and ecological conditions. In general, models revealed less power to describe the spatial variability of fish biomass than cover of reef builders (R2 of best-fit models: 0.25 [fish] and 0.64 [reef builders]). The variability in total benthic cover of reef builders was best described by physical (wave exposure and reef relief) and ecological (turf algal height and coral recruit density) predictors. No metric of anthropogenic pressure was related to spatial variation in reef builder cover. In contrast, total fish biomass showed a consistent (albeit weak) association with anthropogenic predictors (fishing and diving pressure). As is typical of most environmental gradients, the spatial patterns of both fish biomass density and reef builder cover were spatially autocorrelated. Residuals from the best-fit model for fish biomass retained a signature of spatial autocorrelation while the best-fit model for reef builder cover removed spatial autocorrelation, thus reinforcing our finding that environmental predictors were better able to describe the spatial variability of reef builders than that of fish biomass. As we seek to understand spatial variability of coral reef communities at the scale of most management units (i.e., at kilometer- to island-scales), distinct and scale-dependent perspectives will be needed when considering different functional groups.
    Description: This research and the larger efforts of Blue Halo Curacao were supported by funding from the Waitt Institute and with permissions from the Government of Curacao, Ministry of Health, Environment, and Nature. Field logistics were further supported by the Waitt Institute vessel crew, CARMABI Foundation, The Dive Shop Curacao, and Dive Charter Curacao.
    Keywords: Community ecology ; Oceanography ; Anthropogenic impacts ; Spatial variation ; Spatial autocorrelation
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 10
    Publication Date: 2009-09-26
    Print ISSN: 0175-7598
    Electronic ISSN: 1432-0614
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Published by Springer
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