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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 101 (2000), S. 677-684 
    ISSN: 1432-2242
    Keywords: Key words RFLPs ; Synteny ; Oryza ; Oat ; Map
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  We present the first genetic map of wild rice (Zizania palustris L., 2n=2x=30), a native aquatic grain of northern North America. The map is composed principally of previously mapped RFLP (restriction fragment length polymorphism) genetic markers from rice (Oryza sativa 2n=2x=24). The map is important as a foundation for genetic and crop improvement studies, as well as a reference for genome organization comparisons among Gramineae species. A comparative mapping approach with rice is especially useful because wild rice is grouped in the same subfamily, Oryzoideae, and no other mapping comparison has yet been made within the subfamily. As rice is the reference point for mapping and gene cloning in cereals, establishing a consensus map within the subfamily identifies conserved and unique regions. The genomes of wild rice and rice differ in total DNA content (wild rice has twice that of rice) and chromosome pairs (wild rice=15 versus rice=12). The wild rice linkage map reported herein consists of 121 RFLP markers on 16 linkage groups spanning 1805 cM. Two linkage groups consist of only two markers. Colinear markers were found representing all rice linkage groups except #12. The majority of rice loci mapped to colinearly arranged arrays in wild rice (92 of 118). Features of the map include duplication of portions of three rice linkage groups and three possible translocations. The map gives basic information on the composition of the wild rice genome and provides tools to assist in the domestication of this important food source.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 99 (1999), S. 793-799 
    ISSN: 1432-2242
    Keywords: Key words RFLPs ; Synteny ; Oryza ; Oat ; Map
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  We present the first genetic map of wild rice (Zizania palustris L., 2n=2x=30), a native aquatic grain of northern North America. This map is composed principally of previously mapped RFLP (restriction fragment length polymorphism) genetic markers from rice (Oryza sativa 2n=2x=24). The map is important as a foundation for genetic and crop improvement studies as well as a reference for genome organization comparisons among species of Gramineae. A comparative mapping approach with rice is especially useful because wild rice is grouped in the same subfamily, Oryzoideae, and no other mapping comparison has yet been made within the subfamily. As rice is the reference point for mapping and gene cloning in cereals, establishing a consensus map within the subfamily identifies conserved and unique regions. The genomes of wild rice and rice differ in total DNA content (wild rice has twice that of rice) and the number of chromosome pairs (wild rice=15 versus rice=12). The wild rice linkage map reported herein consists of 121 RFLP markers on 16 linkage groups spanning 1805 cM. Two linkage groups consist of only two markers. Colinear markers were found representing all rice linkage groups except #12. The majority of rice loci mapped to colinearly arranged arrays in wild rice (92 of 118). Features of the map include duplication of portions of three rice linkage groups and three possible translocations. The map gives basic information on the composition of the wild rice genome and provides tools to assist in the domestication of this important food source.
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  • 3
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Zeitschrift für die chemische Industrie 46 (1933), S. 169-170 
    ISSN: 0044-8249
    Keywords: Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 4
    Publication Date: 2014-12-09
    Description: Surface nuclear magnetic resonance (NMR) is a geophysical technique that provides the ability to noninvasively image water content in the subsurface. To improve the ability of this method to produce images representative of the true subsurface structure, we require high spatial resolution. We derive a method to provide improved spatial resolution through the use of novel excitation strategies designed to enhance and exploit the information content within the quadrature component of the NMR signal. In a traditional surface NMR experiment, the frequency of the perturbing magnetic field ( $${\mathbf{\boldsymbol{B}}}_{\mathrm{1}}$$ ) is chosen to equal the Larmor frequency of the hydrogen nuclei in the subsurface. In this case, it is assumed that the signal phase is determined entirely by the conductivity structure of the subsurface. Several studies have found that modeling the signal phase accurately and inverting a complex-valued NMR signal, can improve the spatial resolution of the surface NMR water content images. We propose alternative excitation schemes designed to generate a complex-valued signal, where the quadrature component can be controlled experimentally and was larger than that generated by the conductivity effects. This allowed a single excitation to provide two samplings of the subsurface properties, one stored in the real component and another in the quadrature component. To test if the alternative sampling strategies can provide improved spatial resolution in surface NMR, we evaluated a synthetic study contrasting the performance of three techniques. We contrasted two techniques designed to generate a complex-valued NMR signal during excitation, called off-resonance excitation and composite pulse excitation , to a traditional on-resonance excitation. We demonstrated that our proposed excitation schemes were able to better resolve boundaries between layers with contrasting properties, and we produced images with improved spatial resolution.
    Print ISSN: 0016-8033
    Electronic ISSN: 1942-2156
    Topics: Geosciences , Physics
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  • 5
    Publication Date: 2011-01-25
    Description: Author(s): J. A. J. Burgess, D. C. Fortin, J. E. Losby, D. Grombacher, J. P. Davis, and M. R. Freeman [Phys. Rev. B 83, 019904] Published Mon Jan 24, 2011
    Keywords: Errata
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 6
    Publication Date: 2019
    Description: 〈span〉〈div〉SUMMARY〈/div〉An integral component of the surface nuclear magnetic resonance forward model involves predicting the magnitude of the transverse magnetization following excitation. To predict the transverse magnetization, the Bloch equation must be solved. Traditional surface NMR forward models solve a simplified version of the Bloch equation where the relaxation terms are neglected. A shortcoming of this approach is that it can struggle to accurately describe the impact of relaxation during pulse effects. To address this concern, an alternative forward model based on solution of the full-Bloch equation is proposed. The advantage of the proposed scheme is that it implicitly accounts for relaxation during pulse effects, increases the flexibility to implement alternative parametrizations of the inverse model, and can readily describe an arbitrary excitation protocol given that it no longer requires closed form expressions of the transverse magnetizations. To demonstrate the potential of the updated forward modelling scheme, a novel approach for the inversion of complex-valued free-induction decay (FID) data is presented. The inverse model is reparametrized in order to produce depth profiles of the water content, T〈sub〉2〈/sub〉* and T〈sub〉2〈/sub〉. This approach has great potential to enhance the ability of FID measurements to provide insights into pore size and permeability as it can provide direct sensitivity to T〈sub〉2〈/sub〉. In contrast, traditional approaches that employ a forward model based on the simplified Bloch equation and estimate only T〈sub〉2〈/sub〉* are plagued by uncertainty surrounding the link between T〈sub〉2〈/sub〉* and pore size/permeability. Synthetic and field results are presented to demonstrate the feasibility of the proposed forward model and FID inversion framework.〈/span〉
    Print ISSN: 2051-1965
    Electronic ISSN: 1365-246X
    Topics: Geosciences
    Published by Oxford University Press on behalf of The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 7
    Publication Date: 2019
    Description: The Southern Ocean receives limited liquid surface water input from the Antarctic continent. It has been speculated, however, that significant liquid water may flow from beneath the Antarctic Ice Sheet, and that this subglacial flow carries that water along with dissolved nutrients to the coast. The delivery of solutes, particularly limiting nutrients like bioavailable iron, to the Southern Ocean may contribute to ecosystem processes including primary productivity. Using a helicopter-borne time domain electromagnetic survey along the coastal margins of the McMurdo Dry Valleys region of Southern Victoria Land, Antarctica, we detected subsurface connections between inland lakes, aquifers, and subglacial waters. These waters, which appear as electrically conductive anomalies, are saline and may contain high concentrations of biologically important ions, including iron and silica. Local hydraulic gradients may drive these waters to the coast, where we postulate they emerge as submarine groundwater discharge. This high latitude groundwater system, imaged regionally in the McMurdo Dry Valleys, may be representative of a broader system of Antarctic submarine groundwater discharge that fertilizes the Southern Ocean. In total, it has the potential to deliver tens of gigagrams of bioavailable Fe and Si to the coastal zone.
    Electronic ISSN: 2306-5338
    Topics: Architecture, Civil Engineering, Surveying , Geography
    Published by MDPI
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  • 8
    Publication Date: 2019
    Description: 〈span〉〈div〉SUMMARY〈/div〉Aquifer properties can be obtained from envelopes of surface nuclear magnetic resonance (NMR) signals, but this demands high-quality data. To retrieve reliable envelopes using synchronous detection from the intrinsically low signal-to-noise ratio (SNR) surface NMR recordings, a variety of signal processing techniques are employed to mitigate noise. We present a different approach to retrieve complex envelopes using spectral analysis and a sliding window, which can potentially improve SNR significantly. The complex envelope is composed of the spectral values at the Larmor frequency found through the Fourier transform of surface NMR data using a sliding window. We discuss how to maximize the SNR of envelope by selecting the optimum length and shape of the sliding window. An accompanying method for determining the Larmor frequency is presented and we address how noise can deteriorate the envelope retrieval in spectral analysis. Results obtained from synthetic models and field measurements in low and high noise environments reveal that the proposed method not only improves the accuracy and efficiency of envelope retrieval, but also eliminates the transient distortion of early-time signal caused by the filtering procedure.〈/span〉
    Print ISSN: 2051-1965
    Electronic ISSN: 1365-246X
    Topics: Geosciences
    Published by Oxford University Press on behalf of The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 9
    Publication Date: 2019
    Description: 〈span〉〈div〉Summary〈/div〉An integral component of the surface nuclear magnetic resonance forward model involves predicting the magnitude of the transverse magnetization following excitation. To predict the transverse magnetization the Bloch equation must be solved. Traditional surface NMR forward models solve a simplified version of the Bloch equation where the relaxation terms are neglected. A shortcoming of this approach is that it can struggle to accurately describe the impact of relaxation during pulse effects. To address this concern, an alternative forward model based on solution of the full Bloch equation is proposed. The advantage of the proposed scheme is that it implicitly accounts for relaxation during pulse effects, increases the flexibility to implement alternative parameterizations of the inverse model, and can readily describe an arbitrary excitation protocol given that it no longer requires closed form expressions of the transverse magnetizations. To demonstrate the potential of the updated forward modelling scheme, a novel approach for the inversion of complex-valued FID data is presented. The inverse model is reparametrized in order to produce depth profiles of the water content, T〈sub〉2〈/sub〉* and T〈sub〉2〈/sub〉. This approach has great potential to enhance the ability of FID measurements to provide insights into pore size and permeability as it can provide direct sensitivity to T〈sub〉2〈/sub〉. In contrast, traditional approaches that employ a forward model based on the simplified Bloch equation and estimate only T〈sub〉2〈/sub〉* are plagued by uncertainty surrounding the link between T〈sub〉2〈/sub〉* and pore size/permeability. Synthetic and field results are presented to demonstrate the feasibility of the proposed forward model and FID inversion framework.〈/span〉
    Print ISSN: 2051-1965
    Electronic ISSN: 1365-246X
    Topics: Geosciences
    Published by Oxford University Press on behalf of The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 10
    Publication Date: 2012-02-03
    Description: Journal of Chemical Information and Modeling DOI: 10.1021/ci200454v
    Topics: Chemistry and Pharmacology
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