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  • 1
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    Unknown
    In:  Geol. Rundschau, Taipei, Am. Inst. Min. Metal. Petr. Eng., vol. 85, no. 9, pp. 58-64, pp. 2324, (ISSN 0343-5164)
    Publication Date: 1996
    Keywords: Fracture ; Rheology ; Inelastic ; ductile ; instability ; Geol. aspects ; Muehlhaus ; Muhlhaus
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  • 2
    Publication Date: 2019
    Description: Among the Lamiaceae family, the genus Thymus is an economically important genera due to its medicinal and aromatic properties. Most Thymus molecular research has focused on the determining the phylogenetic relationships between different species, but no published work has focused on the evolution of the transcriptome across the genus to elucidate genes involved in terpenoid biosynthesis. Hence, in this study, the transcriptomes of five different Thymus species were generated and analyzed to mine putative genes involved in thymol and carvacrol biosynthesis. High-throughput sequencing produced ~43 million high-quality reads per sample, which were assembled de novo using several tools, then further subjected to a quality evaluation. The best assembly for each species was used as queries to search within the UniProt, KEGG (Kyoto Encyclopedia of Genes and Genomes), COG (Clusters of Orthologous Groups) and TF (Transcription Factors) databases. Mining the transcriptomes resulted in the identification of 592 single-copy orthogroups used for phylogenetic analysis. The data showed strongly support a close genetic relationship between Thymus vulgaris and Thymus daenensis. Additionally, this study dates the speciation events between 1.5–2.1 and 9–10.2 MYA according to different methodologies. Our study provides a global overview of genes related to the terpenoid pathway in Thymus, and can help establish an understanding of the relationship that exists among Thymus species.
    Electronic ISSN: 2073-4425
    Topics: Biology
    Published by MDPI
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  • 3
    Publication Date: 2016-06-03
    Description: Helium isotopic ratios ( 3 He/ 4 He) observed in 25 mineral springs and wells above the Cascadia forearc provide a marker for fluids derived from Juan de Fuca lithosphere. This exploratory study documents a significant component of mantle-derived helium within forearc springs and wells, and in turn, documents variability in helium enrichment across the Cascadia forearc. Sample sites arcward of the forearc mantle corner generally yield significantly higher ratios (∼1.2–4.2 R A ) than those seaward of the corner (∼0.03–0.7 R A ). 3 He detected above the inner forearc mantle wedge may represent a mixture of both oceanic lithosphere and forearc mantle sources, whereas 3 He detected seaward of the forearc mantle corner likely has only an oceanic source. The highest ratios in the Cascadia forearc coincide with slab depths (∼40–45 km) where metamorphic dehydration of young oceanic lithosphere is expected to release significant fluid and where tectonic tremor occurs, whereas little fluid is expected to be released from the slab depths (∼ 25–30 km) beneath sites seaward of the corner. These observations provide independent evidence that tremor is associated with deep fluids, and further suggest that high pore pressures associated with tremor may serve to keep fractures open for 3 He migration through the ductile upper mantle and lower crust. This article is protected by copyright. All rights reserved.
    Electronic ISSN: 1525-2027
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 4
    Publication Date: 2012-12-20
    Description: Author(s): B. Ghanbarian-Alavijeh, T. E. Skinner, and A. G. Hunt In this study, we develop a saturation-dependent treatment of dispersion in porous media using concepts from critical path analysis, cluster statistics of percolation, and fractal scaling of percolation clusters. We calculate spatial solute distributions as a function of time and calculate arrival t... [Phys. Rev. E 86, 066316] Published Wed Dec 19, 2012
    Keywords: Fluid dynamics
    Print ISSN: 1539-3755
    Electronic ISSN: 1550-2376
    Topics: Physics
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  • 5
    Publication Date: 2016-02-24
    Description: Quantifying fluid flow through porous media hinges on the description of permeability, a property of considerable importance in many fields ranging from oil and gas exploration to hydrology. A common building block for modeling porous media permeability is consideration of fluid flow through tubes with circular cross section described by Poiseuille's law in which flow discharge is proportional to the 4 th power of the tube's radius. In most natural porous media, pores are neither cylindrical nor smooth, they often have an irregular cross section and rough surfaces. This study presents a theoretical scaling of Poiseuille's approximation for flow in pores with irregular rough cross section quantified by a surface fractal dimension D s2 . The flow rate is a function of the average pore radius to the power 2(3- D s2 ) instead of 4 in the original Poiseuille's law. Values of D s2 range from 1 to 2, hence, the power in the modified Poiseuille's approximation varies between 4 and 2, indicating that flow rate decreases as pore surface roughness (and surface fractal dimension D s2 ) increases. We also proposed pore length-radius relations for isotropic and anisotropic fractal porous media. The new theoretical derivations are compared with standard approximations and with experimental values of relative permeability. The new approach results in substantially improved prediction of relative permeability of natural porous media relative to the original Poiseuille equation. This article is protected by copyright. All rights reserved.
    Print ISSN: 0043-1397
    Electronic ISSN: 1944-7973
    Topics: Architecture, Civil Engineering, Surveying , Geography
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 6
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    Unknown
    American Association of Petroleum Geologists (AAPG)
    Publication Date: 2016-01-27
    Description: Advances in virtual outcrop technologies and their introduction to fracture characterization allow extraction of fracture data from very large and inaccessible areas. The recent development of automated or semiautomated methods for fracture extraction aims to reduce or avoid tedious, time-consuming, and biased manual interpretation of fractures from virtual outcrops. We present a benchmarking exercise between a previously proposed automated fracture picking method, manual picking, and fieldwork methods. Comparison between the three methods highlighted their relative advantages and limitations. The automated fracture picking method provided excellent results in terms of fracture orientation, size, spatial distribution, and density. Fieldwork is complementary to fracture extraction from virtual outcrops, and it should focus on quality control of remote sensing data, poorly exposed areas, small-scale observations, diagenesis, timing of fracture development, building conceptual models, and linking fracture stratigraphy to rock properties. We propose a best practice for the use and integration of manual and/or automated fracture extraction from virtual outcrop and fieldwork data for fracture characterization and modeling from outcrop analogs. We consider integration of different methods as the best way to improve the modeling exercise while reducing operational costs and risks.
    Print ISSN: 0149-1423
    Electronic ISSN: 0149-1423
    Topics: Geosciences
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  • 7
    Publication Date: 2012-08-18
    Description: We compare predictions of the saturation dependence of air permeability from percolation theory with experimental results taken from the last 60 years. We selected experiments with sufficient density of data points to verify a functional dependence. The typical number of such data points was about 10, but actual values ranged from 4 to 31. The predicted saturation dependence is a universal power law in the air-filled porosity (less a threshold value) with an exponent of 2.00. Our investigation showed that the experimental power was 2.028 ± 0.028 with an R2 value, averaged across all the experiments, of greater than 0.96 for database 1 (including 16 samples from the literature) and 1.814 ± 0.386 with an R2 value of larger than 0.90 for database 2 (including 23 samples from Tang et al. (2011)). The threshold value of the air-filled porosity could be predicted reasonably from the wet end of the soil water retention curves. The threshold varied systematically with soil texture. We also compare the proposed model with three other methods, e.g., Millington and Quirk, Burdine-Brooks-Corey, and Kawamoto et al., in estimation of air permeability. The results indicate that the universal scaling approach estimates air permeability more accurately than other methods. Thus, we believe that we have confirmed the universal scaling predicted as well as demonstrated its usefulness in predicting the air permeability.
    Print ISSN: 0043-1397
    Electronic ISSN: 1944-7973
    Topics: Architecture, Civil Engineering, Surveying , Geography
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 8
    Publication Date: 2012-05-03
    Description: Two micrometeorological techniques for measuring trace gas emission rates from distributed area sources were evaluated using a variety of synthetic area sources. The vertical radial plume mapping (VRPM) and the backward Lagrangian stochastic (bLS) techniques with an open-path optical spectroscopic sensor were evaluated for relative accuracy for multiple emission-source and sensor configurations. The relative accuracy was calculated by dividing the measured emission rate by the actual emission rate; thus, a relative accuracy of 1.0 represents a perfect measure. For a single area emission source, the VRPM technique yielded a somewhat high relative accuracy of 1.38 ± 0.28. The bLS technique resulted in a relative accuracy close to unity, 0.98 ± 0.24. Relative accuracies for dual source emissions for the VRPM and bLS techniques were somewhat similar to single source emissions, 1.23 ± 0.17 and 0.94 ± 0.24, respectively. When the bLS technique was used with vertical point concentrations, the relative accuracy was unacceptably low,
    Electronic ISSN: 2073-4433
    Topics: Geosciences
    Published by MDPI Publishing
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  • 9
    Publication Date: 2014-02-21
    Description: Gas diffusion modeling in percolation clusters provides a theoretical framework to address gas transport in porous materials and soils. Applying this methodology, above the percolation threshold the air-filled porosity dependence of the gas diffusion in porous media follows universal scaling, a power law in the air-filled porosity (less a threshold value) with an exponent of 2.0. We evaluated our hypothesis using 71 experiments (632 data points) including repacked, undisturbed and field measurements available in the literature. For this purpose, we digitized D p / D 0 (where D p and D 0 are gas diffusion coefficients in porous medium and free space, respectively) and ε (air-filled porosity) values from graphs presented in 7 published papers. We found that 66 experiments out of 71 followed universal scaling with the exponent 2, evidence that our percolation-based approach is robust. Integrating percolation and effective medium theories produced a numerical prefactor whose value depends on the air-filled porosity threshold and the air-filled porosity value above which the behavior of gas diffusion crosses over from percolation to effective medium.
    Print ISSN: 0043-1397
    Electronic ISSN: 1944-7973
    Topics: Architecture, Civil Engineering, Surveying , Geography
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 10
    Publication Date: 2011-09-24
    Description: Two micrometeorological techniques for measuring trace gas emission rates from distributed area sources were evaluated using a variety of synthetic area sources. The vertical radial plume mapping (VRPM) and the backward Lagrangian stochastic (bLS) techniques with an open-path optical spectroscopic sensor were evaluated for relative accuracy for multiple emission-source and sensor configurations. The relative accuracy was calculated by dividing the measured emission rate by the actual emission rate; thus, a relative accuracy of 1.0 represents a perfect measure. For a single area emission source, the VRPM technique yielded a somewhat high relative accuracy of 1.38 ± 0.28. The bLS technique resulted in a relative accuracy close to unity, 0.98 ± 0.24. Relative accuracies for dual source emissions for the VRPM and bLS techniques were somewhat similar to single source emissions, 1.23 ± 0.17 and 0.94 ± 0.24, respectively. When the bLS technique was used with vertical point concentrations, the relative accuracy was unacceptably low,
    Electronic ISSN: 2073-4433
    Topics: Geosciences
    Published by MDPI Publishing
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