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  • 1
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] Diatoms are unicellular or chain-forming phytoplankton that use silicon (Si) in cell wall construction. Their survival during periods of apparent nutrient exhaustion enhances carbon sequestration in frontal regions of the northern North Atlantic. These regions may therefore have a more ...
    Type of Medium: Electronic Resource
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  • 2
    Publication Date: 2023-01-13
    Keywords: Abundance per volume; BAS_01; BAS_02; BAS_03; BAS_04; BAS_05; BAS_06; BAS_07; BAS_08; BAS_09; BAS_10; BAS_11; BAS_12; BAS_13; BAS_14; BAS_15; BAS_16; BAS_17; BAS_18; BAS_19; BAS_20; BAS_21; BAS_22; BAS_23; BAS_24; BAS_25; BAS_26; BAS_27; BAS_28; BAS_29; BAS_30; BAS_31; BAS_32; BAS_33; BAS_34; BAS_35; BAS_36; BAS_37; BAS_38; BAS_39; BAS_40; BAS_41; BAS_42; BAS_43; BAS_44; BAS_45; BAS_46; BAS_47; BAS_48; BAS_49; BAS_50; British Antarctic Survey; Date/Time of event; Depth, bottom/max; Depth, top/min; DEPTH, water; Event label; JR1160360; JR1770073; JR1770082; JR1770098; JR1770141; JR1770171; Latitude of event; Longitude of event; Net; NET; Scotia Sea; Taxon/taxa; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 336 data points
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  • 3
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    In:  Supplement to: Tremblay, Nelly; Cascella, Kévin; Toullec, Jean-Yves; Held, Christoph; Fielding, Sophie; Tarling, Geraint A; Abele, Doris (submitted): Gene expression and physiological changes of the Antarctic krill Euphausia superba under different hypoxia intensities.
    Publication Date: 2023-02-16
    Description: Antarctic krill (Euphausia superba) from South Georgia comprise one of the most northern and abundant krill stocks. South Georgia waters are undergoing rapid warming, as a result of climate change, which in turn could alter the oxygen concentration of the water. We investigated gene expression in Antarctic krill related to aerobic metabolism, antioxidant defence, and heat-shock response under severe (2.5% O2 saturation or 0.6 kPa) and threshold (20% O2 saturation or 4 kPa) hypoxia exposure compared to in situ levels (normoxic; 100% O2 saturation or 21 kPa). Biochemical metabolic and oxidative stress indicators complemented the genic expression analysis to detect in vivo signs of stress during the hypoxia treatments. Expression levels of the genes citrate synthase (CS), mitochondrial manganese superoxide dismutase (SODMn-m) and one heat-shock protein isoform (E) were higher in euphausiids incubated 6 h at 20% O2 saturation than in animals exposed to control (normoxic) conditions. All biochemical antioxidant defence parameters remained unchanged among treatments. Levels of lipid peroxidation were raised after 6 h of severe hypoxia. Overall, short-term exposure to hypoxia altered mitochondrial metabolic and antioxidant capacity, but did not induce anaerobic metabolism. Antarctic krill are swarming organisms and may experience short periods of hypoxia when present in dense swarms. A future, warmer Southern ocean, where oxygen saturation levels are decreased, may result in smaller, less dense swarms as they act to avoid greater levels of hypoxia.
    Keywords: Rectangular midwater trawl 4500 µm; RMT8; South_Georgia_RMT; South Georgia Island
    Type: Dataset
    Format: application/zip, 3 datasets
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  • 4
    Publication Date: 2023-02-16
    Keywords: Citrate synthase mean normalized expression gene expression; Heat-shock protein 70 isoform A gene expression; Heat-shock protein 70 isoform C gene expression; Heat-shock protein 70 isoform D gene expression; Heat-shock protein 70 isoform E gene expression; Rectangular midwater trawl 4500 µm; RMT8; South_Georgia_RMT; South Georgia Island; Superoxide dismutase manganese (cytosolic) gene expression; Superoxide dismutase manganese (mitochondrial) gene expression; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 217 data points
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  • 5
    Publication Date: 2023-02-16
    Keywords: DEPTH, water; Haemolymph, lactate; Rectangular midwater trawl 4500 µm; RMT8; South_Georgia_RMT; South Georgia Island
    Type: Dataset
    Format: text/tab-separated-values, 51 data points
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  • 6
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    In:  Supplement to: Reid, Keith; Watkins, Jon L; Murphy, Eugene J; Trathan, Phil N; Fielding, Sophie; Enderlein, Peter (2010): Krill population dynamics at South Georgia: implications for ecosystem-based fisheries management. Marine Ecology Progress Series, 399, 243-252, https://doi.org/10.3354/meps08356
    Publication Date: 2023-12-13
    Description: The South Georgia region supports a large biomass of krill that is subject to high interannual variability. The apparent lack of a locally self-maintaining krill population at South Georgia means that understanding the mechanism underlying these observed population characteristics is essential to successful ecosystem-based management of krill fishery in the region. Krill acoustic-density data from surveys conducted in the early, middle and late period of the summers of 2001 to 2005, together with krill population size structure over the same period from predator diet data, were used with a krill population dynamics model to evaluate potential mechanisms behind the observed changes in krill biomass. Krill abundance was highest during the middle of the summer in 3 years and in the late period in 2 years; in the latter there was evidence that krill recruitment was delayed by several months. A model scenario that included empirically derived estimates of both the magnitude and timing of recruitment in each year showed the greatest correlation with the acoustic series. The results are consistent with a krill population with allochthonous recruitment entering a retained adult population; i.e. oceanic transport of adult krill does not appear to be the major factor determining the dynamics of the adult population. The results highlight the importance of the timing of recruitment, especially where this could introduce a mismatch between the peak of krill abundance and the peak demand from predators, which may exacerbate the effects of changes in krill populations arising from commercial harvesting and/or climate change.
    Keywords: Coefficient; DATE/TIME; ECHO; Echosounder; Euphausia superba, biomass; International Polar Year (2007-2008); IPY; South_Georgia_NW; South Georgia Island; Time coverage
    Type: Dataset
    Format: text/tab-separated-values, 48 data points
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  • 7
    Publication Date: 2024-03-20
    Keywords: Carbonyls, per protein mass; Catalase activity, unit per protein mass; Citrate synthase activity, unit per protein mass; Glutathione equivalents, per wet mass; Glutathione oxidized/Glutathione reduced, ratio; Glutathione peroxidase activity, unit per protein mass; Glutathione S-transferase activity, unit per protein mass; Lactate, per wet mass; Malondialdehyde, per wet mass; Rectangular midwater trawl 4500 µm; RMT8; South_Georgia_RMT; South Georgia Island; Succinate, per wet mass; Superoxide dismutase manganese activity, unit per protein mass; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 917 data points
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  • 8
    Publication Date: 2024-05-14
    Description: Physical, chemical and biogeochemical measurements derived from CTD-rosette deployments during three visits to site P3 (November to December, 2017) in the South Atlantic. Measurements were made during COMICS cruise DY086 on the RRS Discovery using a trace metal free Titanium Rosette (events 4, 7, 15, 19, 24, 26, 29) and a Stainless Steel Rosette (all other events). Physical parameters include temperature, salinity, density, photosynthetically active radiation and turbulence; chemical parameters include dissolved oxygen, dissolved oxygen saturation, nitrate, phosphate and silicate; biogeochemical parameters include turbidity, beam transmittance, beam attenuation, fluorescence, particulate organic carbon (POC), dissolved organic carbon (DOC), chlorophyll-a, net primary productivity (NPP), ambient leucine assimilation and bacterial cell count. To determine turbulence, a downward facing lowered acoustic doppler current profiler (LADCP, Teledyne Workhorse Monitor 300 kHz ADCP) was attached to the CTD frame. Shear and strain, which are obtained from velocity and density measurements, were used to estimate the dissipation rate of turbulent kinetic energy and the diapycnal eddy diffusivity from a fine-scale parameterisation. Estimates are calculated by parameterising internal wave-wave interactions and assuming that wave breaking modulates turbulent mixing. A detailed description of the method for calculating diffusivity from LADCP and CTD can be found in Kunze et al. (2006). Two datasets with different vertical resolutions were produced: one in which the shear is integrated from 150 to 300 m and the strain over 20-150 m, and one in which the shear is integrated from 70 to 200 m and the strain over 30-200 m. Nutrients (nitrate, phosphate, silicate) were determined via colourimetric analysis (see cruise report, Giering and Sanders, 2019), POC was determined as described in Giering et al. (2023), DOC and DOC flux were determined as described in Lovecchio et al. (2023), NPP was determined as described in Poulton et al. (2019), and ambient leucine assimilation and bacterial cell count were determined as described in Rayne et al. (2024). Bacterial abundance and leucine assimilation were made from bottle samples of six CTD casts of the stainless-steel rosette. Water was collected at six depths (6 m, deep-chlorophyll maximum, mixed layer depth + 10, 100, 250 and 500 m). Acid-cleaned HDPE carboys and tubing were used for sampling. Samples were then stored in the dark and at in-situ temperature prior to on-board laboratory sample preparation or analysis. Flow cytometry was used to measure bacterial abundance. Room temperature paraformaldehyde was used to fix 1.6 ml samples for 30 minutes. Then, using liquid nitrogen, the samples were flash frozen and stored at -80°C. Samples were then defrosted before being stained using SYBR Green I and run through the flow cytometer (BD FACSort™). The method of Hill et al. (2013) was applied to determine prokaryotic leucine assimilation using L-[4,5-³H] leucine which has a specific activity of 89.3 Ci/mmol­. In the mixed and upper layers of the water column, the protocol in Zubkov et al. (2007) was followed. Below the mixed layer, adaptions to the method included reducing the concentration of ³H-Leucine to 0.005, 0.01, 0.025, 0.04 and 0.05 nM; increasing experimental volumes to 30 ml; enhancing incubation times to 30, 60, 90 and 120 min. These adaptions were made to improve accuracy where lower rates of leucine assimilation were expected. Data were provided by the British Oceanographic Data Centre and funded by the National Environment Research Council.
    Keywords: 74EQ20171115; Angular scattering coefficient, 700 nm; Attenuation, optical beam transmission; Bacteria; Barometer, Paroscientific, Digiquartz TC; biological carbon pump; Calculated; Calculated according to UNESCO (1983); Calculation according to Kunze et al. (2006); Carbon, organic, dissolved; Carbon, organic, dissolved, flux; Carbon, organic, particulate; Chlorophyll a; Colorimetric analysis; COMICS; Conductivity sensor, SEA-BIRD SBE 4C; Controls over Ocean Mesopelagic Interior Carbon Storage; CTD/Rosette; CTD-RO; DATE/TIME; Density, sigma-theta (0); DEPTH, water; Discovery (2013); Dissipation rate; Dissolved Oxygen Sensor, Sea-Bird, SBE 43 and SBE 43F; DY086; DY086_CTD002; DY086_CTD003; DY086_CTD004; DY086_CTD005; DY086_CTD006; DY086_CTD007; DY086_CTD008; DY086_CTD009; DY086_CTD010; DY086_CTD015; DY086_CTD016; DY086_CTD017; DY086_CTD018; DY086_CTD019; DY086_CTD020; DY086_CTD021; DY086_CTD022; DY086_CTD023; DY086_CTD024; DY086_CTD026; DY086_CTD027; DY086_CTD028; DY086_CTD029; DY086_CTD030; DY086_CTD031; DY086_CTD032; DY086_CTD033; Eddy diffusivity; Event label; Flow cytometer, Becton Dickinson, FACSort; Fluorometer, Chelsea Instruments, Aquatracka MKIII; fluxes; High Temperature Catalytic Oxidation, Shimadzu TOC-VCPN; LATITUDE; Leucine uptake rate; Liquid scintillation counter, Packard, TRI-CARB 3100TR; LONGITUDE; marine biogeochemistry; Net primary production of carbon; Nitrate; Organic Elemental Analyzer, Thermo Fisher Scientific, Flash 2000; Oxygen; Oxygen saturation; PAR sensor, Biospherical, LI-COR, SN 70510; PAR sensor, Biospherical, LI-COR, SN 70520; Phosphate; Radiation, photosynthetically active; Radioassays, liquid scintillation counting; Salinity; Scattering meter, WET Labs, ECO-BB OBS; Silicate; Site; SUMMER; Sustainable Management of Mesopelagic Resources; Temperature, water; Temperature sensor, SEA-BIRD SBE 3Plus; Transmissometer, WET Labs, C-Star
    Type: Dataset
    Format: text/tab-separated-values, 171794 data points
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  • 9
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    In:  Supplement to: Bednaršek, Nina; Tarling, Geraint A; Bakker, Dorothee C E; Fielding, Sophie; Jones, Elizabeth M; Venables, H J; Ward, Peter; Kuzirian, Alan; Lézé, Bertrand; Feely, Richard A; Murphy, Eugene J (2012): Extensive dissolution of live pteropods in the Southern Ocean. Nature Geoscience, 5(12), 881-885, https://doi.org/10.1038/ngeo1635
    Publication Date: 2024-05-22
    Description: The carbonate chemistry of the surface ocean is rapidly changing with ocean acidification, a result of human activities. In the upper layers of the Southern Ocean, aragonite-a metastable form of calcium carbonate with rapid dissolution kinetics-may become undersaturated by 2050. Aragonite undersaturation is likely to affect aragonite-shelled organisms, which can dominate surface water communities in polar regions. Here we present analyses of specimens of the pteropod Limacina helicina antarctica that were extracted live from the Southern Ocean early in 2008. We sampled from the top 200 m of the water column, where aragonite saturation levels were around 1, as upwelled deep water is mixed with surface water containing anthropogenic CO2. Comparing the shell structure with samples from aragonite-supersaturated regions elsewhere under a scanning electron microscope, we found severe levels of shell dissolution in the undersaturated region alone. According to laboratory incubations of intact samples with a range of aragonite saturation levels, eight days of incubation in aragonite saturation levels of 0.94-1.12 produces equivalent levels of dissolution. As deep-water upwelling and CO2 absorption by surface waters is likely to increase as a result of human activities, we conclude that upper ocean regions where aragonite-shelled organisms are affected by dissolution are likely to expand.
    Keywords: Alkalinity, total; Animalia; Antarctic; Aragonite saturation state; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coulometric titration; Dissolution level; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Incubation duration; Laboratory experiment; Limacina helicina; Mollusca; OA-ICC; Ocean Acidification International Coordination Centre; Open ocean; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; Percentage; Percentage, standard deviation; pH; Phosphate; Polar; Potentiometric titration; Salinity; Scotia_OA; Silicate; Single species; Species; Station label; Temperature, water; Time point, descriptive; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 904 data points
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  • 10
    Publication Date: 2024-04-27
    Description: Acoustic backscatter data were collected at five frequencies (18, 38, 70, 120 and 200 kHz) across two visits to site P3 (P3A, P3B), South Georgia, aboard the RRS Discovery during DY086. Acoustic backscatter was measured with a Simrad EK60. The data consistently shows no evidence of synchronised diel vertical migration (Cook et al. 2023).
    Keywords: 74EQ20171115; biological carbon pump; COMICS; Controls over Ocean Mesopelagic Interior Carbon Storage; Date/Time of event; Date/Time of event 2; DEPTH, water; Discovery (2013); DY086; DY086_EK60_P3A; DY086_EK60_P3B; Echo backscatter; Echosounder, Simrad, EK60; Event label; fluxes; Frequency; Latitude of event; Longitude of event; marine biogeochemistry; Site; SUMMER; Sustainable Management of Mesopelagic Resources; Time of day
    Type: Dataset
    Format: text/tab-separated-values, 5760 data points
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