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  • Nitrous oxide  (5)
  • Methanogenesis  (2)
  • Organic Chemistry  (2)
  • Soil hydrogenase  (2)
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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Biology and fertility of soils 21 (1996), S. 152-159 
    ISSN: 1432-0789
    Keywords: Thiosulfate ; Tetrathionate ; Carbonyl sulfide ; Carbon disulfide ; Nitrate ; Nitrite ; Nitric oxide ; Nitrous oxide
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Thiosulfate and CS2 inhibit nitrification. The effect of the addition of thiosulfate on the turnover of inorganic N compounds was tested in an Egyptian and a German arable soil under nitrifying and denitrifying conditions. For nitrification, the soils were amended with NH inf4 sup+ and incubated under aerobic conditions. For denitrification, the soils were amended with NO inf3 sup- and incubated under anaerobic conditions. In both cases, the thiosulfate decreased with time while tetrathionate accumulated to an intermediate extent. Both compounds disappeared completely after 〈25 days. Production of CS2 was not observed. Carbonyl sulfide was produced only in the Egyptian soil, but production decreased with increasing amounts of added thiosulfate. Under nitrifying conditions, the addition of increasing amounts of thiosulfate (25, 50, and 100 μg S g-1 dry weight) resulted in decreasing rates of NH inf4 sup+ oxidation to NO inf3 sup- ; it also resulted in an increasing intermediate accumulation of NO inf2 sup- and NO, and in an increasing production of N2O. Under denitrifying conditions, the addition of increasing amounts of thiosulfate did not significantly affect the rate of NO inf3 sup- reduction, and resulted in an increasing intermediate accumulation of NO inf2 sup- and of NO only in the German soil in which the production of N2O was slightly inhibited by thiosulfate. These results demonstrate that the nitrification of NH inf4 sup+ and NO inf2 sup- was inhibited by increasing concentrations of thiosulfate and/or tetrathionate without involving the formation of volatile S compounds as potential nitrification inhibitors. Denitrification was not affected by the addition of thiosulfate.
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Archives of microbiology 155 (1990), S. 82-88 
    ISSN: 1432-072X
    Keywords: Homoacetogenesis ; Methanogenesis ; Sulfate reduction ; Caffeate reduction ; Nitrate reduction ; Interspecies H2 transfer ; Affinity ; H2 threshold ; “Critical” Gibbs free energy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The ethanol-oxidizing, proton-reducing Pelobacter acetylenicus was grown in chemostat cocultures with either Acetobacterium woodii, Methanobacterium bryantii, or Desulfovibrio desulfuricans. Stable steady state conditions with tightly coupled growth were reached at various dilution rates between 0.02 and 0.14 h-1. Both ethanol and H2 steady state concentrations increased with growth rate and were lower in cocultures with the sulfate reducer 〈 methanogen 〈 homoacetogen. Due to the higher affinity for H2, D. desulfuricans outcompeted M. bryantii, and this one A. woodii when inoculated in cocultures with P. acetylenicus. Cocultures with A. woodii had lower H2 steady state concentrations when bicarbonate reduction was replaced by the energetically more favourable caffeate reduction. Similarly, cocultures with D. desulfuricans had lower H2 concentrations with nitrate than with sulfate as electron acceptor. The Gibbs free energy (ΔG) available to the H2-producing P. acetylenicus was independent of growth rate and the H2-utilizing partner, whereas the ΔG available to the latter increased with growth rate and the energy yielding potential of the H2 oxidation reaction. The “critical” Gibbs free energy (ΔGc), i.e. the minimum energy required for H2 production and H2 oxidation, was-5.5 to-8.0 kJ mol-1 H2 for P. acetylenicus,-5.1 to-6.3 kJ mol-1 H2 for A. woodii,-7.5 to-9.1 kJ mol-1 H2 for M. bryantii, and-10.3 to-12.3 kJ mol-1 H2 for D. desulfuricans. Obviously, the potentially available energy was used more efficiently by homoacetogens 〉 methanogens 〉 sulfate reducers.
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Biology and fertility of soils 25 (1997), S. 41-46 
    ISSN: 1432-0789
    Keywords: Key words Nitric oxide ; Nitrous oxide ; Ammonium monooxygenase ; Acetylene inhibition
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Incubation of soil under low partial pressures of acetylene (10 Pa) is a widely used method to specifically inhibit nitrification due to the suicide inhibition of ammonium monooxygenase (AMO), the first enzyme in NH4 + oxidation by nitrifying bacteria. Although the inhibition of AMO is irreversible, recovery of activity is possible if new enzyme is synthesized. In experiments with three different soils, NH4 + concentrations decreased and NO3 – concentrations increased soon after acetylene was removed from the atmosphere. Recovery of NO production started immediately after the removal of acetylene. The release rates of NO and N2O were higher in soil samples which were only preincubated with 10 Pa acetylene than in those which were kept in the presence of 10 Pa acetylene. In the permanent presence of 10 Pa acetylene, NH4 + and NO3 – concentrations stayed constant, and the release rates of NO and N2O were low. These low release rates were apparently due to processes other than nitrification. Our experiments showed that the blockage of nitrification by low (10 Pa) acetylene partial pressures is only reliable when the soil is kept in permanent contact with acetylene.
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  • 4
    Electronic Resource
    Electronic Resource
    Springer
    Biology and fertility of soils 10 (1990), S. 139-144 
    ISSN: 1432-0789
    Keywords: Denitrification ; Nitrification ; Chemodenitrification ; Ammonium ; Nitrite ; Nitrate ; Nitric oxide ; Nitrous oxide
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary NO and N2O release rates were measured in an acidic forest soil (pH 4.0) and a slightly alkaline agricultural soil (pH 7.8) after the pH was adjusted to values ranging from pH 4.0 to 7.8. The total release of NO and N2O during 20 h of incubation was determined together with the net changes in the concentrations of NH 4 + , NO 2 − and NO 3 − in the soil. The release of NO and N2O increased after fertilization with NH 4 + and/or NO 3 − ; it strongly decreased with increasing pH in the acidic forest soil; and it increased when the pH of the alkaline agricultural soil was decreased to pH 6.5. However, there was no simple correlation between NO and N2O release or between these compounds and activities such as the NO 2 − accumulation, NO 3 − reduction, or NH 4 + oxidation. We suggest that soil pH exerts complex controls, e.g., on microbial populations or enzyme activities involved in nitrification and denitrification.
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  • 5
    Electronic Resource
    Electronic Resource
    Springer
    Biology and fertility of soils 11 (1991), S. 38-42 
    ISSN: 1432-0789
    Keywords: Nitric oxide ; Nitrous oxide ; Denitrifiers ; Nitrifiers ; Compensation concentrations ; Uptake rate constants
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary NO and N2O release rates were measured in an acidic forest soil (pH 4.0) and a slightly alkaline agricultural soil (pH 7.8), which were incubated at different O2 concentrations (〈0.01 – 20% O2) and at different NO concentrations (40 – 1000 ppbv NO). The system allowed the determination of simultaneously operating NO production rates and NO uptake rate constants, and the calculation of a NO compensation concentration. Both NO production and NO consumption decreased with increasing O2. NO consumption decreased to a smaller extent than NO production, so that the NO compensation concentrations also decreased. However, the NO compensation concentrations were not low enough for the soils to become a net sink for atmospheric NO. The release of N2O increased relative to NO release when the gases were allowed to accumulate instead of being flushed out. The forest soil contained only denitrifying, but not nitrifying bacteria, whereas the agricultural soil contained both. Nevertheless, NO release rates were less sensitive to O2 in the forest soil compared to the agricultural soil.
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  • 6
    Electronic Resource
    Electronic Resource
    Springer
    Biology and fertility of soils 12 (1991), S. 127-130 
    ISSN: 1432-0789
    Keywords: Soil hydrogenase ; Knallgas bacteria ; pH optimum ; Temperature optimum ; Apparent activation energy ; Seasonal change
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary Hydrogen oxidation in soil was measured at low (1 ppmv) and high (300 ppmv) H2 concentrations to distinguish between the activities of abiontic soil hydrogenases and Knallgas bacteria, respectively. The two activities also showed distinctly different pH optima, temperature optima, and apparent activation energies. The pH optima for the soil hydrogenase activities were similar to the soil pH in situ, i.e., pH 8 in an slightly alkaline garden soil (pH 7.3) and pH 5 in an acidic cambisol (pH 4.6–5.4). Most probable number determinations in the alkaline acidic soils showed that Knallgas bacterial populations grew preferentially in neutral or acidic media, respectively. However, H2 oxidation activity by Knallgas bacteria in the acidic soil showed two distinct pH optima, one at pH 4 and a second at pH 6.4–7.0. The soil hydrogenase activities exhibited temperature optima at 35–40°C, whereas the Knallgas bacteria had optima at 50–60°C. The apparent activation energies of the soil hydrogenases were lower (11–23kJ mol-1) than those of the Knallgas bacteria (51–145 kJ mol-1). Most of the soil hydrogenase activity was located in the upper 10 cm of the acidic cambisol and changed with season. The seasonal activity changes were correlated with changes in soil moisture and soil pH.
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  • 7
    Electronic Resource
    Electronic Resource
    Springer
    Biology and fertility of soils 18 (1994), S. 109-114 
    ISSN: 1432-0789
    Keywords: Soil hydrogenase ; ATP ; Bacterial counts ; Particle size fractionation ; Cambisol
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Low atmospheric H2 concentrations (0.55 ppmv) are oxidized in soils by a high-affinity activity with typical characteristics of an abiontic soil enzyme. This activity was measured in a meadow cambisol and a forest cambisol. In both soils, the maximum activity was reached at a soil moisture of about 20% water-holding capacity, and was localized in the top Ah horizon. The soils were fractionated by dry sieving and wet filtration into nine different particle-size fractions, ranging from 3 to 2000 μm in size. H2 oxidation was measured by three different assays and was compared to the ATP content and microscopic counts of bacteria in the same fractions. In the meadow soil, the specific activities of H2 oxidation increased with the particle size (maximum at 200–500 μm), whereas ATP and bacterial counts showed no trend. In the forest soil, the specific activities of H2 oxidation increased with the particle size up to 50–100 μm, and then decreased again. ATP and bacterial counts, however, showed the opposite trend, i.e., decreased with an increasing particle size. Thus the H2-oxidizing activity was not correlated with characteristic microbial biomass parameters. Although significant percentage (29–64%) of randomly isolated heterotrophic bacteria was able to oxidize H2, this activity was too small to account for the H2 oxidation in the soil. In both soils, most of the activity present was found in particles of 100–500 μm in size. The recovery shifted to smaller size fractions when larger soil aggregates were broken up by wet instead of dry sieving. Attempts to extract the H2-oxidizing activity from the soil particles were unsuccessful.
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  • 8
    Electronic Resource
    Electronic Resource
    Springer
    Biology and fertility of soils 21 (1996), S. 152-159 
    ISSN: 1432-0789
    Keywords: Key words Thiosulfate ; Tetrathionate ; Carbonyl sulfide ; Carbon disulfide ; Nitrate ; Nitrite ; Nitric oxide ; Nitrous oxide
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Thiosulfate and CS2 inhibit nitrification. The effect of the addition of thiosulfate on the turnover of inorganic N compounds was tested in an Egyptian and a German arable soil under nitrifying and denitrifying conditions. For nitrification, the soils were amended with NH and incubated under aerobic conditions. For denitrification, the soils were amended with NO and incubated under anaerobic conditions. In both cases, the thiosulfate decreased with time while tetrathionate accumulated to an intermediate extent. Both compounds disappeared completely after 〈25 days. Production of CS2 was not observed. Carbonyl sulfide was produced only in the Egyptian soil, but production decreased with increasing amounts of added thiosulfate. Under nitrifying conditions, the addition of increasing amounts of thiosulfate (25, 50, and 100 μg S g–1 dry weight) resulted in decreasing rates of NH oxidation to NO; it also resulted in an increasing intermediate accumulation of NO and NO, and in an increasing production of N2O. Under denitrifying conditions, the addition of increasing amounts of thiosulfate did not significantly affect the rate of NO reduction, and resulted in an increasing intermediate accumulation of NO and of NO only in the German soil in which the production of N2O was slightly inhibited by thiosulfate. These results demonstrate that the nitrification of NH and NO was inhibited by increasing concentrations of thiosulfate and/or tetrathionate without involving the formation of volatile S compounds as potential nitrification inhibitors. Denitrification was not affected by the addition of thiosulfate.
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  • 9
    Electronic Resource
    Electronic Resource
    Springer
    Plant and soil 92 (1986), S. 223-233 
    ISSN: 1573-5036
    Keywords: CH4 emission ; CH4 oxidation ; Ebullition ; Laboratory and field studies ; Methanogenesis ; Paddy soil ; Rice ; Weeds
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary Methane emission rates from rice-vegetated paddy fields followed a seasonal pattern different to that of weed-covered or unvegetated fields. Presence of rice plants stimulated the emission of CH4 both in the laboratory and in the field. In unvegetated paddy fields CH4 was emitted almost exclusively by ebullition. By contrast, in rice-vegetated fields more than 90% of the CH4 emission was due to plant-mediated transport. Rice plants stimulated methanogenesis in the submerged soil, but also enhanced the CH4 oxidation rates within the rhizosphere so that only 23% of the produced CH4 was emitted. Gas bubbles in vegetated paddy soils contained lower CH4 mixing ratios than in unvegetated fiels. Weed plants were also efficient in mediating gas exchnage between submerged soil and atmosphere, but did not stimulate methanogenesis. Weed plants caused a relatively high redox potential in the submerged soil so that 95% of the produced CH4 was oxidized and did not reach the atmosphere. The emission of CH4 was stimulated, however, when the cultures were incubated under gas atmospheres containing acetylene or consisting of O2-free nitrogen.
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  • 10
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Journal für Praktische Chemie/Chemiker-Zeitung 9 (1874), S. 300-303 
    ISSN: 0021-8383
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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