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  • Artikel  (2)
  • HbNbCb  (1)
  • Intraresidue sugar-to-base correlations  (1)
  • Nucleic acids  (1)
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  • Artikel  (2)
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  • 1
    ISSN: 1573-5001
    Schlagwort(e): Triple-resonance 3D NMR ; Isotopically labeled RNA ; Purine ; Intraresidue sugar-to-base correlations ; HsCsNb ; HsCs(N)bCb ; HbNbCb
    Quelle: Springer Online Journal Archives 1860-2000
    Thema: Biologie , Chemie und Pharmazie
    Notizen: Summary A set of three 3D (1H, 13C, 15N) triple-resonance correlation experiments has been designed to provide H1′-H8 intraresidue sugar-to-base correlations in purines in an unambiguous and efficient manner. Together, the HsCsNb, HsCs(N)bCb, and HbNbCb experiments correlate the H1′ sugar proton to the H8 proton of the attached base by means of the {H1′, C1′, N9, C8, H8} heteronuclear scalar coupling network. The assignment strategy presented here allows for unambiguous H1′-H8 intraresidue correlations, provided that no two purines have both the same H1′ and C1′ chemical shifts and the same C8 and N9 chemical shifts. These experiments have yielded H1′-H8 intraresidue sugar-to-base correlations for all five guanosines in the [13C, 15N] isotopically labeled RNA duplex r(GGCGCUUGCGUC)2.
    Materialart: Digitale Medien
    Standort Signatur Erwartet Verfügbarkeit
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  • 2
    ISSN: 1573-5001
    Schlagwort(e): RNA ; Nucleic acids ; Isotope label ; Guanosine ; Purine
    Quelle: Springer Online Journal Archives 1860-2000
    Thema: Biologie , Chemie und Pharmazie
    Notizen: Summary A triple resonance HNC-TOCSY-CH experiment is described for correlating the guanosine imino proton and H8 resonances in 13C-/15N-labeled RNAs. Sequential assignment of the exchangeable imino protons in Watson-Crick base pairs is generally made independently of the assignment of the nonexchangeable base protons. This H(NC)-TOCSY-(C)H experiment makes it possible to unambiguously link the assignment of the guanosine H8 resonances with sequential assignment of the guanosine imino proton resonances. 2D H(NC)-TOCSY-(C)H spectra are presented for two isotopically labeled RNAs, a 30-nucleotide lead-dependent ribozyme known as the leadzyme, and a 48-nucleotide hammerhead ribozyme-RNA substrate complex. The results obtained on these two RNAs demonstrate that this HNC-TOCSY-CH experiment is an important tool for resonance assignment of isotopically labeled RNAs.
    Materialart: Digitale Medien
    Standort Signatur Erwartet Verfügbarkeit
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