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  • 1
    Publication Date: 2023-02-25
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Lamb, D. C., Goldstone, J. V., Zhao, B., Lei, L., Mullins, J. G. L., Allen, M. J., Kelly, S. L., & Stegeman, J. J. Characterization of a virally encoded flavodoxin that can drive bacterial cytochrome P450 monooxygenase activity. Biomolecules, 12(8), (2022): 1107, https://doi.org/10.3390/biom12081107.
    Description: Flavodoxins are small electron transport proteins that are involved in a myriad of photosynthetic and non-photosynthetic metabolic pathways in Bacteria (including cyanobacteria), Archaea and some algae. The sequenced genome of 0305φ8-36, a large bacteriophage that infects the soil bacterium Bacillus thuringiensis, was predicted to encode a putative flavodoxin redox protein. Here we confirm that 0305φ8-36 phage encodes a FMN-containing flavodoxin polypeptide and we report the expression, purification and enzymatic characterization of the recombinant protein. Purified 0305φ8-36 flavodoxin has near-identical spectral properties to control, purified Escherichia coli flavodoxin. Using in vitro assays we show that 0305φ8-36 flavodoxin can be reconstituted with E. coli flavodoxin reductase and support regio- and stereospecific cytochrome P450 CYP170A1 allyl-oxidation of epi-isozizaene to the sesquiterpene antibiotic product albaflavenone, found in the soil bacterium Streptomyces coelicolor. In vivo, 0305φ8-36 flavodoxin is predicted to mediate the 2-electron reduction of the β subunit of phage-encoded ribonucleotide reductase to catalyse the conversion of ribonucleotides to deoxyribonucleotides during viral replication. Our results demonstrate that this phage flavodoxin has the potential to manipulate and drive bacterial P450 cellular metabolism, which may affect both the host biological fitness and the communal microbiome. Such a scenario may also be applicable in other viral-host symbiotic/parasitic relationships.
    Description: The study was supported by the National Institutes of Health grant 5U41HG003345 (J.V.G.), by the Woods Hole Center for Oceans and Human Health, NIH P01 ES021923 and NSF OCE-1314642 (J.J.S.), and by a Fulbright Scholarship (to D.C.L.). Funding at Swansea University supported by the European Regional Development Fund/Welsh European Funding Office via the BEACON project (S.L.K).
    Keywords: Flavodoxin ; Virus/phage ; Cytochrome P450 ; Evolution ; Bacteria
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2019-07-12
    Description: Simulated surface conditions of the Goddard Earth Observing System model, version 5 (GEOS 5) atmospheric general circulation model (AGCM) are examined for the contemporary Greenland Ice Sheet (GrIS). A surface parameterization that explicitly models surface processes including snow compaction, meltwater percolation and refreezing, and surface albedo is found to remedy an erroneous deficit in the annual net surface energy flux and provide an adequate representation of surface mass balance (SMB) in an evaluation using simulations at two spatial resolutions. The simulated 1980-2008 GrIS SMB average is 24.7+/-4.5 cm yr(- 1) water-equivalent (w.e.) at.5 degree model grid spacing, and 18.2+/-3.3 cm yr(- 1) w.e. for 2 degree grid spacing. The spatial variability and seasonal cycle of the simulation compare favorably to recent studies using regional climate models, while results from 2 degree integrations reproduce the primary features of the SMB field. In comparison to historical glaciological observations, the coarser resolution model overestimates accumulation in the southern areas of the GrIS, while the overall SMB is underestimated. These changes relate to the sensitivity of accumulation and melt to the resolution of topography. The GEOS-5 SMB fields contrast with available corresponding atmospheric models simulations from the Coupled Model Intercomparison Project (CMIP5). It is found that only a few of the CMIP5 AGCMs examined provide significant summertime runoff, a dominant feature of the GrIS seasonal cycle. This is a condition that will need to be remedied if potential contributions to future eustatic change from polar ice sheets are to be examined with GCMs.
    Keywords: Geophysics
    Type: GSFC-E-DAA-TN13841
    Format: application/pdf
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