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  • Organic Chemistry  (130)
  • Chemical Engineering  (20)
  • thema EDItEUR::N History and Archaeology::NH History  (14)
  • Saccharomyces cerevisiae
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  • 1
    ISSN: 1432-0983
    Keywords: β-glucosidase ; Kluyveromyces fragilis ; DNA sequence ; Saccharomyces cerevisiae
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The complete nucleotide sequence of the β-glucosidase gene of Kluyveromyces fragilis has been determined. This sequence contains an open reading frame of 2535 base pairs encoding a protein of 845 amino acids. Analysis of the transcription products revealed only one transcript of about 3 kb identical in both Kluyveromyces fragilis and in the expression host Saccharomyces cerevisiae. The protein molecular weight of 93,811 Kd deduced from the sequence is consistent with the 90,000 Kd determined by SDS polyacrylamide gel electrophoresis with the purified protein. Mapping of the starts of transcription shows that two starting points are used in the natural host Kluyveromyces fragilis. A comparison of the amino acid sequence with that of other β-glucosidases revealed three regions of homology. One of these regions contains an amino acid sequence very similar to a peptide isolated from the active site of β-glucosidase A3 from Aspergillus wentii and could be implicated in the catalytic mechanism of these glucolytic enzymes.
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  • 2
    ISSN: 0018-019X
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We describe a flexible, stereocontrolled synthesis of enantiomerically pure substituted cyclopentenes and cyclopentanes - including 11α-hydroxy-13-oxaprostanoic acid 20 - (-)-quinic acid via an acyclic precursor 6 by an intramolecular aldolisation-dehydration reaction.
    Additional Material: 1 Ill.
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  • 3
    ISSN: 0018-019X
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An efficient combination of electrospray mass spectrometry (ES-MS), spectrophotometric and 1H-NMR titrations in solution is used to characterize the assembly of the segmental ligand 2-{6-[1-(3,5-dimethoxybenzyl)-1H-benzimidazol-2-yl]pyridin-2-yl}-1, 1′-dimethyl-5,5′-methylene-2′-(5-methylpyridin-2-yl)bis[1H- benzimidazole] (L2) with ZnII and 4f metal ions, LnIII. Ligand L2 reacts with Zn(ClO4)2 in MeCN to give successively [Zn(L2)2]2+, where the metal ion is coordinated by the tridentate binding units of the ligands, and the double-helical head-to-head complex [Zn2(L2)2]4+. When L2 reacts with Ln(ClO4)3 (Ln = La, Eu, Lu), LaIII only leads to a well-defined cylindrical C1-symmetrical homodinuclear head-to-tail complex [La2(L2)3]6+ in solution, while chemical-exchange processes prevent the 1H-NMR characterization of [Eu2(L2)3]6+, and LuIII gives complicated mixtures of complexes. However, stoichiometric amounts of LnIII (Ln = La, Ce, Pr, Nd, Sm, Eu, Tb, Y, Lu), ZnII, and L2 in a 1:1:3 ratio lead to the selective formation of the C3-symmetrical heterodinuclear complexes [LnZn(L2)3]5+ under thermodynamic control. Detailed NOE studies show that the ligands are wrapped about the C3 axis defined by the metal ions, and the separation of dipolar and contact contributions to the 1H-NMR paramagnetic shifts of the axial complexes [LnZn(L2)3]5+ (Ln = Ce, Pr, Nd, Sm, Eu) in MeCN establishes that ZnII occupies the pseudo-octahedral capping coordination site defined by the three bidentate binding units, while LnIII lies in the resulting ‘facial’ pseudo-tricapped trigonal prismatic site produced by the three remaining tridentate units. Photophysical measurements show that [LnZn(L2)3]5+ (Ln = Eu, Tb) are only weakly luminescent because of quenching processes associated with the C3-cylindrical structure of the complexes. The use of 3d metal ions to control and design isomerically pure ‘facial’ tricapped trigonal prismatic lanthanide building blocks is discussed together with the calculation of a new nephelauxetic parameter associated with heterocyclic N-atoms coordinated to LnIII.
    Additional Material: 10 Ill.
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  • 4
    ISSN: 0018-019X
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The ligand 2,6-bis(1-methylbenzimidazol-2-yl)pyridine (mbzimpy, 1) reacts with EuIII to give [Eu(mbzimpy)(NO3)3(CH3OH)] [4] whose crystal structure (EuC22H21N8O10, a = 7.658(3) Å, b = 19.136(2) Å, c = 8.882 Å, β = 104.07(1)°, monoclinic, P21, Z = 2) shows a mononuclear structure where EuIII is ten-coordinate by a meridional tridentate mbzimpy ligand, three bidentate nitrates, and one CH3OH molecule, leading to a low-symmetry coordination sphere around the metalion. Essentially the same coordination is found in the crystal structure of [Eu(obzimpy)(NO3)3] (8) (EuC35H45N8O9, a = 9.095(2) Å, b = 16.624(2) Å, c = 26.198(6) Å, β = 95.85(1)°, monoclinic, P21/c, Z = 4) obtained by reaction of 2,6-bis(1-octylbenzimidazol-2-yl)pyridine (obzimpy, 2) with EuIII. Detailed photophysical studies of crystalline [Ln(mbzimpy)(NO3)3(CH3OH)] and [Ln(obzimpy)(NO3)3] complexes (Ln = Eu, Gd, Tb, Lu) show that 1 and 2 display 1ππ* and 3ππ* excited states very similar to those observed in 2,2′:6′,2″-terpyridine, leading to efficient ligand to LnIII intramolecular energy transfer. Spectroscopic results show that an extremely efficient mbzimpy-to-EuIII transfer occurs in [Ln(mbzimpy)(NO3)3(CH3OH)] and in the case of TbIII, a TbIII-to-mbzimpy back transfer is also implied in the deactivation process. The origin of these peculiar effects and the influence of ligand design by going from mbzimpy to obzimpy are discussed. 1H-NMR and luminescence data indicate that the structure found in the crystal is essentially maintained in solution.
    Additional Material: 14 Ill.
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  • 5
    ISSN: 0018-019X
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Fe(ClO4)2 reacts with the segmental ligand 2-{6-[1-(3,5-dimethoxybenzyl)-1H-benzimidazol-2-yl]pyridin-2-yl}-1,1′-dimethyl-5,5′-methylene-2′-(5-methylpyridin-2-yl)bis[1H-benzimidazole] (L2) in MeCN to give the diamagnetic deep violet complex [Fe(L2)2]2+ where the metal is pseudo-octahedrally coordinated by two perpendicular tridentate binding units. When L2 reacts with an equimolar mixture of Ln(ClO4)3 (Ln = La, Ce, Pr, Nd, Sm, Eu) and Fe(ClO4)2, electrospray-mass spectrometric, spectrophotometric, and 1H-NMR data in MeCN show the selective formation of the deep red heterodinuclear C3-cylindrical complexes [LnFe(L2)3]5+ where the three ligands L2 are wrapped about the metal-metal axis. FeII occupies the pseudo-octahedral capping site produced by the three bidentate units and LnIII lies in the resulting ‘facial’ pseudo-tricapped trigonal prismatic site defined by the three remaining tridentate coordinating units. The heterodinuclear complexes [LnFe(L2)3]5+ display spin-state equilibrium (1A ⇄ 5T) and thermochromism in MeCN between 243 and 333 K. Detailed 1H-NMR, UV/VIS, and magnetic measurements in solution show that the partial spin-crossover behavior of [LnFe(L2)3]5+ occurs for Ln = La—Eu with similar thermodynamic parameters (ΔHsc = 20-23 kJ·mol-1 and ΔSsc = 55-66 J·mol-1·K-1) indicating that the size of LnIII has a negligible influence on the spin-state equilibrium. However, the smaller LnIII ions have less affinity for the pseudo-tricapped trigonal prismatic coordination site in the heterodinuclear complexes as demonstrated by the partial decomplexation of [YFe(L2)3]5+ to give [Fe(L2)2]2+ and the absence of the heterodinuclear complex [LuFe(L2)3]5+ under the same conditions. The crucial role played by the sterically demanding FeII in the assembly processes is discussed together with the use of the efficient combination of lanthanide probes with magnetic d-block probes for the design and investigation of luminescent and magnetic materials with controlled structural and physical properties. Photophysical measurements reveal that efficient ligand → metal and Eu → Fe energy transfer occur in [EuFe(L2)3]5+ which strongly quench both the ligand and the Eu-centered luminescence.
    Additional Material: 8 Ill.
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  • 6
    ISSN: 1432-0983
    Keywords: Saccharomyces cerevisiae ; Yeast vectors ; Cosmids ; nif genes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Two vectors, termed pG63.11 (7.6 Kb) and pHCG3 (9.6 Kb), suitable for yeast transformation have been constructed. The pHCG3 vector has cosmid properties. Both vectors contain a single 3.3 Kb EcoRI-HindIII fragment of yeast origin which carries the yeast URA3 gene (1.1 Kb) and the origin of replication of the 2 µm plasmid (2.2 Kb). They confer ampicillin resistance and they contain 5 unique EcoRI,HpaI,HindIII,BamHI and SalI restriction sites. Cosmid pHCG3 was used to clone the nitrogen fixation (nif) gene cluster of Klebsiella pneumoniae carried by twoHindIII fragments of 17 and 26 Kb, respectively. The resulting cosmid, termed pGPC875 (53 Kb) which conferred a Nif+ phenotype to Escherichia coli, was introduced in yeast by transformation. No acetylene reduction activity was detectable in the transformants. However it was shown that the entire information for nitrogen fixation can be replicated and maintained intact in yeast for more than 50 generations of growth.
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  • 7
    ISSN: 1617-4623
    Keywords: RNA splicing ; Maturase ; Recombinase ; Mitochondria ; Saccharomyces cerevisiae
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary When the bI4 RNA maturase, encoded by the fourth intron of the mitochondrial cytochrome b gene of Saccharomyces cerevisiae, was expressed in Escherichia coli, formation of intra-chromosomal Lac+ recombinants was stimulated threefold. This “hyper-rec” phenotype was recA as well as recBCD dependent. The most active form of the bI4 maturase stimulated homologous recombination whereas splicing deficient mutants of bI4 maturase were either deficient in or unable to stimulate homologous recombination.
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  • 8
    ISSN: 1617-4623
    Keywords: Saccharomyces cerevisiae ; Transcription factor ; Zinc finger ; Multidrug resistance
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract TheSaccharomyces cerevisiae PDR3 gene, located near the centromere of chromosome II, has been completely sequenced and characterised. Mutationspdr3-1 andpdr3-2, which confer resistance to several antibiotics can be complemented by a wild-type allele of the PDR3 gene. The sequence of the wild-typePDR3 gene revealed the presence of a long open reading frame capable of encoding a 976-amino acid protein. The protein contains a single Zn(II)2Cys6 binuclear-type zinc finger homologous to the DNA-binding motifs of other transcriptional activators from lower eukaryotes. Evidence that the PDR3 protein is a transcriptional activator was provided by demonstrating that DNA-bound LexA-PDR3 fusion proteins stimulate expression of a nearby promoter containing LexA binding sites. The use of LexA-PDR3 fusions revealed that the protein contains two activation domains, one localised near the N-terminal, cysteine-rich domain and the other localised at the C-terminus. The salient feature of the PDR3 protein is its similarity to the protein coded byPDR1, a gene responsible forpleiotropicdrugresistance. The two proteins show 36% amino acid identity over their entire length and their zinc finger DNA-binding domains are highly conserved. The fact that the absence of both PDR1 and PDR3 (simultaneous disruption of the two genes) enhances multidrug sensitivity strongly suggests that the two transcriptional factors have closely related functions.
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  • 9
    ISSN: 0018-019X
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: XPS. and 1H-NMR. spectra of 1,3-diaryltriazenes complexes of Hg(II)The core binding energies C 1s, N 1s, Hg 4f7/2, Hg 4f5/2 in 7 symmetrical p-substituted 1,3-diphenyltriazenes complexes of Hg(II) have been measured by XPS. Within the limits of experimental error (± 0.2 eV) only one N 1s signal could be detected. This indicates the equivalence of the 3 N-atoms. Invariance of C 1s, N 1s, Hg 4f7/2, Hg 4d5/2 signals with the para substituents on the phenyl ring is explained on the basis of ionic character in the Hg, N bond. These results are corroborated by the 1H-NMR. spectra.
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  • 10
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    Helvetica Chimica Acta 61 (1978), S. 762-771 
    ISSN: 0018-019X
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: IR. and Raman spectra of LnONO3 (50-4,000 cm-1, Ln=La, Gd, Eu, and Dy) are reported and discussed. The low frequency region of the spectra reflects the cubic structure of these compounds. The dimensions of the cubic unit cells determined by X-Ray powder diagrams are: 12.81 ± 0.05 Å for EuONO3, 12.69 ± 0.05 Å for GdONO3, and 12.67 ± 0.05 Å for DyONO3. The vibrational frequencies of the nitrato group are consistent with a bidentate nitrate of C2v symmetry. The synthesis of anhydrous Ln (NO3)3 (Ln=La, Gd, Eu, and Dy) by dehydration of the corresponding penta- or hexahydrates is described. The IR. and Raman spectra (50-4,000 cm-1) are analysed. Splitting of the bands point to a complex structure of these compounds. All six vibrational modes of the nitrato group are observed and the data are again consistent with bidentate NO-3 moieties. Finally, an analytical control of the purity of Ln (NO3)3 is suggested.
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