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  • Biological Physics  (2)
  • Fifth coordinate structure  (2)
  • 1
    ISSN: 1432-072X
    Keywords: b-Type cytochrome ; Pyridine hemochromogen ; Photoreduction ; Cyanide ; CO, NO binding ; Fifth coordinate structure ; EPR
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A green protein from the soluble extract of anaerobically grown Bacillus halodenitrificans cells was purified and determined by non-denaturing procedures or SDS-PAGE to have a molecular mass of 64 kDa. The pyridine hemochromogen was shown to be that of a b-type cytochrome prosthetic group that was soluble in ether. The protein contained 6.2mol protoheme per mol protein-1. Photoreduction of the native protein yielded a product with an electronic absorption spectrum retaining the 559 nm maximum and the 424-nm Soret band displayed in the dithionite-reduced sample. Incubation of a reduced sample in the presence of air failed to return it to the original oxidation state. Electronic spin was not affected by pH. The reduced but not the oxidized form of the cytochrome bound cyanide, carbon monoxide, and nitric oxide, providing spectra resembling those of cytochromes c′ from several sources. Addition of nitroprusside to the reduced protein yielded a spectrum similar to that of the NO reacted protein. Nitric oxide failed to reduce the green protein. The position of the Soret band in the spectrum of the nitric oxide derivative of the green protein suggested a fifth-coordinate nitrosylheme structure. EPR studies provided g values with the triplet spectral pattern consistent with a five-coordinate ferrous nitrosyl heme. Flushing of the NO-derivative with argon and overnight exposure to air returned the nitrosylheme to the ferric form, and EPR values confirmed the reversion. All these spectral characterizations are strikingly similar to those of soluble guanylate cyclase, including the observation that NO was reversibly bound to the protein. EPR spectra of whole cells also displayed the hyperfine lines typical of a nitrosyl-ferrous heme, accentuated when dithionite was added. In the absence of a definitive physiological role because of its unusual properties, the green protein was named a nitric oxide-binding protein.
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  • 2
    ISSN: 1432-072X
    Keywords: Key words     b-Type cytochrome ; Pyridine ; hemochromogen ; Photoreduction ; Cyanide ; CO ; NO binding ; Fifth coordinate structure ; EPR
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract      A green protein from the soluble extract of anaerobically grown Bacillus halodenitrificans cells was purified and determined by non-denaturing procedures or SDS-PAGE to have a molecular mass of 64 kDa. The pyridine hemochromogen was shown to be that of a b-type cytochrome prosthetic group that was soluble in ether. The protein contained 6.2 mol protoheme per mol protein–1. Photoreduction of the native protein yielded a product with an electronic absorption spectrum retaining the 559-nm maximum and the 424-nm Soret band displayed in the dithionite-reduced sample. Incubation of a reduced sample in the presence of air failed to return it to the original oxidation state. Electronic spin was not affected by pH. The reduced but not the oxidized form of the cytochrome bound cyanide, carbon monoxide, and nitric oxide, providing spectra resembling those of cytochromes c′ from several sources. Addition of nitroprusside to the reduced protein yielded a spectrum similar to that of the NO reacted protein. Nitric oxide failed to reduce the green protein. The position of the Soret band in the spectrum of the nitric oxide derivative of the green protein suggested a fifth-coordinate nitrosylheme structure. EPR studies provided g values with the triplet spectral pattern consistent with a five-coordinate ferrous nitrosyl heme. Flushing of the NO-derivative with argon and overnight exposure to air returned the nitrosylheme to the ferric form, and EPR values confirmed the reversion. All these spectral characterizations are strikingly similar to those of soluble guanylate cyclase, including the observation that NO was reversibly bound to the protein. EPR spectra of whole cells also displayed the hyperfine lines typical of a nitrosyl-ferrous heme, accentuated when dithionite was added. In the absence of a definitive physiological role because of its unusual properties, the green protein was named a nitric oxide-binding protein.
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  • 3
    Publication Date: 2018-11-27
    Description: Author(s): José J. Muñoz, Mónica Dingle, and Manuel Wenzel Oscillatory behavior in tissue biology is ubiquitous and may be observed in the form of either chemical or mechanical signals. We present here and solve a mechanical cell model that exhibits oscillations emerging from delayed viscoelastic rheological laws. These include a time delay between the mech... [Phys. Rev. E 98, 052409] Published Mon Nov 26, 2018
    Keywords: Biological Physics
    Print ISSN: 1539-3755
    Electronic ISSN: 1550-2376
    Topics: Physics
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  • 4
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    American Physical Society (APS)
    Publication Date: 2013-07-11
    Description: Author(s): José J. Muñoz and Santiago Albo The measured viscoelastic properties of biological tissues is the result of the passive and active response of the cells. We propose an evolution law of the remodeling process in the cytoskeleton which is able to mimic the viscous properties of biological cellular tissues. Our model is based on dyna... [Phys. Rev. E 88, 012708] Published Wed Jul 10, 2013
    Keywords: Biological Physics
    Print ISSN: 1539-3755
    Electronic ISSN: 1550-2376
    Topics: Physics
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