ISSN:
1573-1375
Keywords:
Markov chain Monte Carlo
;
mixing
;
cumulative sums
;
Ising model
;
Bayesian model choice
Source:
Springer Online Journal Archives 1860-2000
Topics:
Computer Science
,
Mathematics
Notes:
Abstract Yu (1995) provides a novel convergence diagnostic for Markov chain Monte Carlo (MCMC) which provides a qualitative measure of mixing for Markov chains via a cusum path plot for univariate parameters of interest. The method is based upon the output of a single replication of an MCMC sampler and is therefore widely applicable and simple to use. One criticism of the method is that it is subjective in its interpretation, since it is based upon a graphical comparison of two cusum path plots. In this paper, we develop a quantitative measure of smoothness which we can associate with any given cusum path, and show how we can use this measure to obtain a quantitative measure of mixing. In particular, we derive the large sample distribution of this smoothness measure, so that objective inference is possible. In addition, we show how this quantitative measure may also be used to provide an estimate of the burn-in length for any given sampler. We discuss the utility of this quantitative approach, and highlight a problem which may occur if the chain is able to remain in any one state for some period of time. We provide a more general implementation of the method to overcome the problem in such cases.
Type of Medium:
Electronic Resource
URL:
http://dx.doi.org/10.1023/A:1008965613031
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