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  • 1
    Publication Date: 2022-05-25
    Description: Author Posting. © American Society for Microbiology, 2004. This article is posted here by permission of American Society for Microbiology for personal use, not for redistribution. The definitive version was published in Applied and Environmental Microbiology 70 (2004): 1494-1505, doi:10.1128/AEM.70.3.1494-1505.2004.
    Description: Shifts in bacterioplankton community composition along the salinity gradient of the Parker River estuary and Plum Island Sound, in northeastern Massachusetts, were related to residence time and bacterial community doubling time in spring, summer, and fall seasons. Bacterial community composition was characterized with denaturing gradient gel electrophoresis (DGGE) of PCR-amplified 16S ribosomal DNA. Average community doubling time was calculated from bacterial production ([14C]leucine incorporation) and bacterial abundance (direct counts). Freshwater and marine populations advected into the estuary represented a large fraction of the bacterioplankton community in all seasons. However, a unique estuarine community formed at intermediate salinities in summer and fall, when average doubling time was much shorter than water residence time, but not in spring, when doubling time was similar to residence time. Sequencing of DNA in DGGE bands demonstrated that most bands represented single phylotypes and that matching bands from different samples represented identical phylotypes. Most river and coastal ocean bacterioplankton were members of common freshwater and marine phylogenetic clusters within the phyla Proteobacteria, Bacteroidetes, and Actinobacteria. Estuarine bacterioplankton also belonged to these phyla but were related to clones and isolates from several different environments, including marine water columns, freshwater sediments, and soil.
    Description: This work was supported by two grants from the National Science Foundation (LTER grant OCE-9726921 and Microbial Observatory grant MCB-9977897) and the NASA Astrobiology Institute (cooperative agreement NCC2-1054 to M.L.S.).
    Keywords: Bacterioplankton community composition ; Parker River estuary ; Plum Island Sound ; Proteobacteria ; Bacteroidetes ; Actinobacteria
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2022-05-25
    Description: © The Author(s), 2014. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Estuarine, Coastal and Shelf Science 151 (2014): 54-68, doi:10.1016/j.ecss.2014.09.018.
    Description: We describe the long-term response of benthic metabolism in depositional sediments of Boston Harbor, MA, to large reductions in organic matter and nutrient loading. Although Boston Harbor received very high loadings of nutrients and solids it differs from many eutrophic estuaries in that severe hypoxia was prevented by strong tidal flushing. Our study was conducted for 9 years during which a series of improvements to sewage treatment were implemented, followed by 10 years after the culminating step in the clean-up, which was to divert all wastewater effluent offshore. Counter to expectations, sediment oxygen demand and nutrient effluxes initially increased at some stations, reaching some of the highest rates recorded in the literature, and were spatially and temporally quite variable. Early increases were attributed to macrofaunal effects, as sediments at some sites were rapidly colonized by tube-building amphipods, Ampelisca spp., which dominated a dense macrofaunal mat community. As reductions in loading progressed, however, mean rates in oxygen uptake and release of ammonium, nitrate, and phosphate all decreased. At the point of outfall diversion, rates and variability had already decreased substantially. By the end of the study, average oxygen uptake had decreased from 74 to 41 mmol m−2 d−1 and spatial and temporal variability had decreased. Similarly, nutrient fluxes were less than half the rates measured at the start of the project and also less variable. Other evidence of improved conditions included a decrease in the carbon content of sediments at most stations and higher Eh values at all stations, illustrating less reducing conditions. Denitrification also showed an overall decrease from the beginning to the end of the 19-year study, but was highest during the intermediate phases of the cleanup, reaching 9 mmol N m−2 d−1. At the end of the study denitrification averaged for all sites was 2.2 mmol N m−2 d−1, but when compared to current loadings, had become a more important overall sink for N within the harbor. Few long-term examinations of the responses of sediment biogeochemistry to reductions in nutrient and organic matter loading have been reported. Our findings demonstrate that benthic fluxes may respond to reductions in loading in complex ways, and sediments need not represent a long-term legacy that would impede ecosystems recovery.
    Description: We gratefully acknowledge support for this work from the Massachusetts Water Resources Authority, which was provided through seven contracts for the Harbor and Outfall Monitoring Program to Battelle (Duxbury, MA) or ENSR (Westford, MA), and subcontracts to us.
    Keywords: Sediment metabolism ; Coastal marine sediments ; Nutrient reductions ; Denitrification ; Sewage treatment ; Bioirrigation
    Repository Name: Woods Hole Open Access Server
    Type: Article
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