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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Journal of computer aided molecular design 7 (1993), S. 241-250 
    ISSN: 1573-4951
    Keywords: Polyglycine II ; Packing effects ; Conformational study ; Hydrogen bond ; AM1
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary In order to get insight into the conditions that make polyglycine (PG)II a stable structure, the conformational features of three model molecules closely related to the PGII conformation were investigated. The model molecules selected were glycine dipeptide (AGN), glycine tripeptide (AGGN), and glycine tetrapeptide (AGGGN). Environmental effects were mimicked by means of formaldehyde molecules. The calculations were carried out at the SCF semiempirical level, using the AM1 method. The calculations show that of the three systems considered, only the AGGGN molecule presents a minimum energy conformation which corresponds to a PGII structure. The environmental conditions in which this conformation is found were also analyzed.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 47 (1993), S. 231-238 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The helical region of the potential energy surface of blocked α-aminoisobutyric acid (Aib) dipeptide has been studied by using ab initio and semiempirical quantum mechanical methods, as well as force-field-derived methods. Depending on the method, an α-helix or a 310-helix is found to be the energy minimum. The conformations obtained from computations performed at the ab initio quantum mechanical level, as well as by using the AMBER force field, are in excellent agreement with X-ray data. Semiempirical results display some important differences with regard to experimental data. On the other hand, the CVFF force field predicts no energy minimum in the helical region of the Aib potential energy surface. © 1993 John Wiley & Sons, Inc.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
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