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  • 15N-labeled proteins  (1)
  • HNCA with 13C constant-time evolution  (1)
  • Phase correction  (1)
  • 1
    ISSN: 1573-5001
    Keywords: Chemical exchange ; Longitudinal 2-spin-order ; Protein folding ; Protein denaturation ; 15N-labeled proteins ; Conformational equilibrium ; 2D difference NMR spectroscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Summary Observation of the exchange of heteronuclear longitudinal 2-spin-order in a 2D difference correlation experiment enables studies of slow dynamic processes in biological macromolecules with minimal interference from background signals. The experiment is used to establish relations between corresponding15N−1H groups in the native globular form and an unfolded form of the protein 434 repressor (1–69) present in aqueous solution containing 4.2 M urea.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1573-5001
    Keywords: HNCA with 13C constant-time evolution ; protein NMR ; resonance assignments ; spectral resolution ; triple resonance experiments ; TROSY
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract The greatly improved sensitivity resulting from the use of TROSY during 15N evolution and amide proton acquisition enables the recording of HNCA spectra of large proteins with constant-time 13Cα evolution. In [13C]-ct-[15N,1H]-TROSY-HNCA experiments with a 2H/13C/15N-labeled 110 kDa protein, 7,8-dihydroneopterin aldolase from Staphylococcus aureus, nearly all correlation peaks seen in the [15N,1H]-TROSY-HNCA spectrum were also detected. The improved resolution in the 13C dimension then enabled a significant number of sequential assignments that could not be obtained with [15N,1H]-TROSY-HNCA without [13C]-constant-time period.
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Journal of biomolecular NMR 2 (1992), S. 619-629 
    ISSN: 1573-5001
    Keywords: Data processing ; Fourier transformation ; Linear prediction ; Phase correction ; Baseline correction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Summary The new program PROSA is an efficient implementation of the common data-processing steps for multi-dimensional NMR spectra. PROSA performs linear prediction, digital filtering, Fourier transformation, automatic phase correction, and baseline correction. High efficiency is achieved by avoiding disk storage of intermediate data and by the absence of any graphics display, which enables calculation in the batch mode and facilitates porting PROSA on a variety of different computer systems; including supercomputers. Furthermore, all time-consuming routines are completely vectorized. The elimination of a graphics display was made possible by the use of a new, reliable automatic phase-correction routine. CPU times for complete processing of a typical heteronuclear three-dimensional NMR data set of a protein vary between less than 1 min on a NEC SX3 supercomputer and 40 min on a Sun-4 computer system.
    Type of Medium: Electronic Resource
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