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  • 1
    Publication Date: 2009-04-17
    Description: Trypanosoma brucei is the causative agent of African sleeping sickness in humans and one of the causes of nagana in cattle. This protozoan parasite evades the host immune system by antigenic variation, a periodic switching of its variant surface glycoprotein (VSG) coat. VSG switching is spontaneous and occurs at a rate of about 10(-2)-10(-3) per population doubling in recent isolates from nature, but at a markedly reduced rate (10(-5)-10(-6)) in laboratory-adapted strains. VSG switching is thought to occur predominantly through gene conversion, a form of homologous recombination initiated by a DNA lesion that is used by other pathogens (for example, Candida albicans, Borrelia sp. and Neisseria gonorrhoeae) to generate surface protein diversity, and by B lymphocytes of the vertebrate immune system to generate antibody diversity. Very little is known about the molecular mechanism of VSG switching in T. brucei. Here we demonstrate that the introduction of a DNA double-stranded break (DSB) adjacent to the approximately 70-base-pair (bp) repeats upstream of the transcribed VSG gene increases switching in vitro approximately 250-fold, producing switched clones with a frequency and features similar to those generated early in an infection. We were also able to detect spontaneous DSBs within the 70-bp repeats upstream of the actively transcribed VSG gene, indicating that a DSB is a natural intermediate of VSG gene conversion and that VSG switching is the result of the resolution of this DSB by break-induced replication.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2688456/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2688456/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Boothroyd, Catharine E -- Dreesen, Oliver -- Leonova, Tatyana -- Ly, K Ina -- Figueiredo, Luisa M -- Cross, George A M -- Papavasiliou, F Nina -- R01 AI021729/AI/NIAID NIH HHS/ -- R01 AI021729-25/AI/NIAID NIH HHS/ -- R01 AI085973/AI/NIAID NIH HHS/ -- R01AI021729/AI/NIAID NIH HHS/ -- England -- Nature. 2009 May 14;459(7244):278-81. doi: 10.1038/nature07982. Epub 2009 Apr 15.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Lymphocyte Biology, The Rockefeller University, New York, New York 10065, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19369939" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Antigenic Variation/*genetics ; *DNA Breaks, Double-Stranded ; DNA Repair/genetics ; DNA Replication ; Deoxyribonucleases, Type II Site-Specific/genetics/*metabolism ; Gene Conversion/genetics ; *Models, Genetic ; Polymerase Chain Reaction ; Saccharomyces cerevisiae/enzymology/genetics ; Saccharomyces cerevisiae Proteins/genetics/*metabolism ; Sequence Analysis ; Trypanosoma brucei brucei/*genetics/*immunology ; Variant Surface Glycoproteins, Trypanosoma/genetics/immunology
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1989-06-09
    Description: A simple and reproducible assay for DNA-mediated transfection in the trypanosomatid protozoan Leptomonas seymouri has been developed. The assay is based on expression of the Escherichia coli chloramphenicol acetyl transferase (CAT) gene flanked by Leptomonas DNA fragments that are likely to contain necessary elements for gene expression in trypanosomes. After electroporation of cells in the presence of plasmid DNA, CAT activity was detected in crude cell lysates. No activity was detected when the orientation of the L. seymouri mini-exon sequence (placed upstream of the CAT gene) was reversed, or in additional control experiments. This system provides a method for defining transcriptional control elements in trypanosomes.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bellofatto, V -- Cross, G A -- AI21729/AI/NIAID NIH HHS/ -- New York, N.Y. -- Science. 1989 Jun 9;244(4909):1167-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Molecular Parasitology, Rockefeller University, New York, NY 10021.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2499047" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Chloramphenicol O-Acetyltransferase/genetics ; Cloning, Molecular ; Escherichia coli/enzymology/*genetics ; Genes ; *Genes, Bacterial ; Plasmids ; *Transfection ; Trypanosomatina/enzymology/*genetics
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 2011-08-18
    Description: One methyl oleate and two oleyl alcohol surface films were produced on the surface of the North Sea under comparable oceanographic and meteorological conditions in order to investigate their influence on X and L band radar backscatter. Signals are backscattered in these bands primarily by surface waves with lengths of about 2 and 12 cm, respectively, and backscattered power levels in both bands were reduced by the slicks. The reduction was larger at X band than at L band, however, indicating that shorter waves are more intensely damped by the surface films. The oleyl alcohol film caused greater attenuation of short gravity waves than the film of methyl oleate, thus demonstrating the importance of the physicochemical properties of films on the damping of wind-generated gravity capillary waves. Finally, these experiments indicate a distinct dependence of the degree of damping on the angle between wind and waves. Wind-generated waves traveling in the wind direction are more intensely damped by surface films than are waves traveling at large angles to the wind.
    Keywords: OCEANOGRAPHY
    Type: Journal of Geophysical Research (ISSN 0148-0227); 88; 9817-982
    Format: text
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  • 4
    Publication Date: 2019-06-28
    Description: Microwave techniques at X and L band were used to determine the dependence of ocean-wave radar modulation transfer functions (MTFs) on various environmental and radar parameters during the Marine Remote Sensing experiment of 1979 (MARSEN 79). These MIF are presented, as are coherence functions between the AM and FM parts of the backscattered microwave signal. It is shown that they both depend on several of these parameters. Besides confirming many of the properties of transfer functions reported by previous authors, indications are found that MTFs decrease with increasing angle between wave propagation and antenna-look directions but are essentially independent of small changes in air-sea temperature difference. However, coherence functions are much smaller when the antennas are pointed perpendicular to long waves. It is found that X band transfer functions measured with horizontally polarized microwave radiation have larger magnitudes than those obtained by using vertical polarization.
    Keywords: OCEANOGRAPHY
    Type: Journal of Geophysical Research (ISSN 0148-0227); 88; 9747-975
    Format: text
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