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  • 1
    ISSN: 1432-1211
    Keywords: Key words CD22 ; Polymorphism ; Systemic lupus erythematosus ; Rheumatoid arthritis ; Japanese
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract  CD22, a member of the immunoglobulin superfamily, is a B-cell transmembrane glycoprotein that acts as an accessory-signaling component of the B-cell antigen receptor (BCR). Recent evidence indicating the role of CD22 as a negative regulator of BCR signal transduction prompted us to test the possibility that genetic variations of human CD22 may be associated with autoimmune diseases. In this study, variation screening of the entire CD22 coding region was performed, and possible association with rheumatic diseases was tested, using the genomic DNA from 207 healthy Japanese individuals, 68 patients with systemic lupus erythematosus (SLE), and 119 patients with rheumatoid arthritis (RA). Through the variation screening, seven non-synonymous and four synonymous substitutions were identified. In addition, single base substitutions were found in two introns flanking exon-intron junctions. Among these variations, Q152E substitution within the second extracellular domain was observed with a marginally higher frequency in the patients with SLE (3/68, 4.4%) than that in healthy individuals (1/207, 0.5%) (P=0.048. SLE vs healthy individuals), although this difference was no longer significant after correction for the number of comparisons (Pc=0.62). No significant association was observed between any of the variations and RA. These findings indicate that a number of genetic variants are present in CD22, and suggest that CD22 could be considered a candidate for the susceptibility genes to autoimmune diseases.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Immunogenetics 49 (1999), S. 577-579 
    ISSN: 1432-1211
    Keywords: Key words SHP-1 ; Polymorphism ; Rheumatoid arthritis ; Systemic lupus erythematosus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Journal of human genetics 44 (1999), S. 246-248 
    ISSN: 1435-232X
    Keywords: Key words Association study ; χ2 test ; 2 × 2 Contingency table ; Allele frequency ; Allele positivity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract In population-based association studies, the significance of the association between a candidate gene and a disease is usually examined by a simple χ2 test. Such studies require a 2 × 2 contingency table made up of either allele frequencies or positivities in affected and control groups. In order to investigate the influence of each 2 × 2 table on the power of the χ2 test, P values were calculated for two penetrance models (multiplicative and additive). When the value of penetrance was small and not markedly different among genotypes, a large difference in the power of the χ2 test was observed between the two tables. In a multiplicative model, the allele frequency table was superior to the positivity table for detecting significance. In contrast, in an additive model, the positivity table was most suitable. Selecting a contingency table was especially important for detecting true association, when the required significance level was corrected to avoid the problem of multiple hypothesis testing. The χ2 test, therefore, should be performed for both tables to identify a susceptible gene with a low penetrance, even when no significant difference is observed in one table.
    Type of Medium: Electronic Resource
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