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  • 1
    Online Resource
    Online Resource
    Cham :Springer International Publishing :
    Keywords: Botany. ; Genetics. ; Biotechnology. ; Agriculture. ; Plant Science. ; Genetics and Genomics. ; Biotechnology. ; Agriculture.
    Description / Table of Contents: Chapter 1. The Broomcorn Millet Genome -- Chapter 2. Buckwheat Genome and Genomics -- Chapter 3. Tef [Eragrostistis tef (Zucc.) Trotter] -- Chapter 4. The Apricot Genome -- Chapter 5. Chinese Jujube: Crop Background and Genome Sequencing -- Chapter 6. The Longan (Dimocarpus longan) Genome -- Chapter 7. The Mangosteen Genome -- Chapter 8. The Passion Fruit Genome -- Chapter 9. The Soursop Genome (Annona muricata L., Annonaceae) -- Chapter 10. Underutilised Fruit Tree Genomes from Indonesia -- Chapter 11. The Bambara Groundnut Genome: From the Crop to the Genome -- Chapter 12. Grasspea -- Chapter 13. The Lablab Genome -- Chapter 14. The Perennial Horse Gram (Macrotyloma axillare) Genome, Phylogeny, and Selection Across the Fabaceae -- Chapter 15. Breeding and Genomics of Pigeonpea in the Post-NGS Era -- Chapter 16. Rice Bean -- Chapter 17. The Winged Bean Genome: One Species Supermarket -- Chapter 18. Castor Bean: Recent Progress in Understanding the Genome of this Underutilized Crop -- Chapter 19. Genome Resources for Ensete Ventricosum (enset) and Related Species -- Chapter 20. Yam Genomics -- Chapter 21. The African Eggplant -- Chapter 22. Sequencing of the Bottle Gourd Genomes Enhances Understanding of the Ancient Orphan Crop -- Chapter 23. Advances and Prospects in Genomic and Functional Studies of the Aquatic Crop, Sacred Lotus -- Chapter 24. Utilising Public Resources for Fundamental Work in Underutilised and Orphan Crops.
    Abstract: This book highlights the uses for underutilized crops, presenting the state-of-the-art in terms of genome sequencing for over 30 crops, previously understudied and under-researched. In a changing climate and with significant pressure on the land, it is the ideal time to be discussing novel crops, with significant biotic and abiotic tolerances and/or rich nutrient profiles for consumers. Previously, the only species with sequenced genomes were high-profile internationally recognized crops, but in the current era genomes are being sequenced for dozens of crops, including those previously classified as underutilized, now being investigated. This book covers food crops, from fruits to tubers, and from grasses to legumes, as well as crops with non-food applications. Some of these crops have draft genomes, and others have polished genomes with extensive resequencing panels. Each chapter tells the story of an individual crop or crop group, written by experts, focusing on the genome data available, revealing more about crop domestication and genetic variation, and the current and future prospects given that this data is now becoming available. It also highlights how even small sequencing projects can provide draft genome sequences suitable for gene discovery, comparative genomics, and identification of molecular markers for understanding these crops further.
    Type of Medium: Online Resource
    Pages: XXIV, 450 p. 125 illus., 105 illus. in color. , online resource.
    Edition: 1st ed. 2022.
    ISBN: 9783031008481
    Series Statement: Compendium of Plant Genomes,
    DDC: 580
    Language: English
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  • 2
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    PANGAEA
    In:  Supplement to: Chapman, Mark R (2010): Seasonal production patterns of planktonic foraminifera in the NE Atlantic Ocean: Implications for paleotemperature and hydrographic reconstructions. Paleoceanography, 25(1), PA1101, https://doi.org/10.1029/2008PA001708
    Publication Date: 2023-05-12
    Description: Sediment trap samples from OMEX 2 (49°N, 13°W) provide a continuous record of the seasonal succession of planktonic foraminifera in the midlatitude North Atlantic and reveal a complex relationship between periods of production and specific hydrographic conditions. Neogloboquadrina pachyderma dextral coiling (d.), Globigerina bulloides, and Globorotalia inflata are found in great numbers during both the spring and summer seasons, whereas Globigerina quinqueloba, Globorotalia hirsuta, Globorotalia scitula, and Globigerinita glutinata are associated predominantly with the increase in productivity during the spring bloom. Globigerinella aequilateralis, Orbulina universa, and Globigerinoides sacculifer are restricted to late summer conditions following the establishment of a warm, well-stratified surface ocean. An annually integrated fauna from the sediment trap, comprising ~13,000 individuals, is used to evaluate the accuracy of five faunal-based statistical methods of paleotemperature estimation. All of the temperature reconstruction techniques produce estimates of ~16°C and ~11°C for summer and winter surface temperature, respectively, which are in excellent agreement with regional hydrographic data and suggest that the sediment trap assemblage is well represented in the core top faunas. Analysis of the key species that dominate the OMEX 2 sediment trap fauna, G. bulloides, G. inflata, and N. pachyderma d., based on d18O derived temperatures from North Atlantic core top samples, suggests that seasonal variations in planktonic foraminiferal production are nonuniform across the midlatitudes and that this is likely to complicate reconstructing past seasonal hydrographic dynamics using these taxa.
    Type: Dataset
    Format: application/zip, 2 datasets
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  • 3
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    PANGAEA
    In:  Supplement to: Chapman, Mark R; Shackleton, Nicholas J; Zhao, Meixun; Eglinton, Geoffrey (1996): Faunal and alkenone reconstructions of subtropical North Atlantic surface hydrography and paleotemperature over the last 28 kyr. Paleoceanography, 11(3), 343-358, https://doi.org/10.1029/96PA00041
    Publication Date: 2023-05-12
    Description: Two techniques for estimating past variations in sea surface temperature (SST) have been used to investigate climatic change in Biogeochemical Oceanic Flux Study (BOFS) core 31K (19°N, 20°W) from the eastern subtropical Atlantic. High-resolution SST records for the last 28 kyr have been produced using planktonic foraminiferal assemblages, based on the Imbrie-Kipp transfer function technique, and the UK' 37 index derived from abundances of C37 alkenones biosynthesized by prymnesiophyte algae. Modern observations suggest that these indices reflect particular hydrographic conditions in the upper ocean: the UK? 37 index corresponds to the temperature at the time of maximum coccolith productivity, typically late spring-early summer in the study area today, whereas the faunal transfer function is calibrated for seasonal maximum and minimum temperatures. In general, the faunal and biomarker paleotemperature records display comparable SST variations during the last glacial and deglacial, but although the overall trends are similar, differences exist in the magnitude and timing of these temperature changes. Most notably, the faunal T warm and UK' 37 SST estimates diverge by 3°C between 8 ka and 6 ka, and this offset persists through the late Holocene. This difference cannot be adequately explained by uncertainties associated with either the calibration data sets or fluctuating preservation levels. We therefore propose that the deviation in SST estimates is linked to a switch in the seasonal timing of maximum coccolith production from the summer in the glacial ocean to the late spring-early summer in the modern ocean. Our results suggest that a dual approach to SST estimation based on faunal and biomarker proxies can provide a valuable means of evaluating mixed layer and productivity changes associated with the movement of oceanographic frontal zones during the late Quaternary.
    Keywords: AGE; Biogeochemical Ocean Flux Study; BOFS; BOFS31/1K; BOFS31#1; Calculated from UK'37 (Prahl et al., 1988); CD53; Charles Darwin; DEPTH, sediment/rock; GLAMAP; Globigerina bulloides, δ18O; KAL; Kasten corer; Mass spectrometer VG Isogas Prism; Northeast Atlantic; Sea surface temperature, annual mean; Sea surface temperature, summer; Sea surface temperature, winter; Transfer function (Imbrie & Kipp, 1971, in Turekian, Yale Univ Press)
    Type: Dataset
    Format: text/tab-separated-values, 210 data points
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  • 4
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    PANGAEA
    Publication Date: 2023-05-12
    Keywords: Atlantic Ocean; Counting 〉150 µm fraction; DATE/TIME; DEPTH, water; Foraminifera, planktic; Foraminifera, planktic, other; Globigerina bulloides; Globigerina digitata; Globigerina falconensis; Globigerina quinqueloba; Globigerinella aequilateralis; Globigerinita glutinata; Globigerinoides ruber white; Globigerinoides sacculifer; Globorotalia hirsuta; Globorotalia inflata; Globorotalia scitula; Globorotalia truncatulinoides sinistral; Neogloboquadrina pachyderma dextral; Neogloboquadrina pachyderma sinistral; OMEX2; OMEX2_trap; Orbulina universa; Sample ID; Split; Trap, sediment; TRAPS
    Type: Dataset
    Format: text/tab-separated-values, 665 data points
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  • 5
    Publication Date: 2023-05-12
    Keywords: BC; Box corer; Charles Darwin; DEPTH, sediment/rock; Event label; Globigerina bulloides, δ18O; Isotope ratio mass spectrometry; Latitude of event; Longitude of event; NEAP; NEAP-01B; NEAP-02B; NEAP-03B; NEAP-04B; NEAP-05B; NEAP-06B; NEAP-07B; NEAP-08B; NEAP-09B; NEAP-10B; NEAP-11B; NEAP-12B; NEAP-13B; NEAP-14B; NEAP-15B; NEAP-16B; NEAP-17B; NEAP-18B; NEAP-19B; NEAP-20B
    Type: Dataset
    Format: text/tab-separated-values, 40 data points
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  • 6
    Publication Date: 2023-05-12
    Keywords: Depth, reference; DEPTH, sediment/rock; Knorr; KNR140; KNR140-37JPC; PC; Piston corer; Sea surface temperature, summer; South Atlantic Ocean
    Type: Dataset
    Format: text/tab-separated-values, 112 data points
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  • 7
    Publication Date: 2023-05-12
    Keywords: Depth, reference; DEPTH, sediment/rock; GC; Globigerina bulloides, δ18O; Gravity corer; NA87-25
    Type: Dataset
    Format: text/tab-separated-values, 104 data points
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  • 8
    Publication Date: 2023-05-12
    Keywords: DEPTH, sediment/rock; EW9302; EW9302-JPC8; JPC; Jumbo Piston Core; Maurice Ewing; Sea surface temperature, summer; South Atlantic Ocean
    Type: Dataset
    Format: text/tab-separated-values, 42 data points
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  • 9
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    PANGAEA
    In:  Supplement to: Ellison, Christopher RW; Chapman, Mark R; Hall, Ian R (2006): Surface and deep ocean interactions during the Cold Climate Event 8200 years ago. Science, 312(5782), 1929-1932, https://doi.org/10.1126/science.1127213
    Publication Date: 2023-06-27
    Description: Evidence from a North Atlantic deep-sea sediment core reveals that the largest climatic perturbation in our present interglacial, the 8200-year event, is marked by two distinct cooling events in the subpolar North Atlantic at 8490 and 8290 years ago. An associated reduction in deep flow speed provides evidence of a significant change to a major downwelling limb of the Atlantic meridional overturning circulation. The existence of a distinct surface freshening signal during these events strongly suggests that the sequenced surface and deep ocean changes were forced by pulsed meltwater outbursts from a multistep final drainage of the proglacial lakes associated with the decaying Laurentide Ice Sheet margin.
    Keywords: Age, 14C AMS; Age, calibrated; Age, dated; Age, dated standard deviation; Age, maximum/old; Age, minimum/young; Calendar age; CALYPSO; Calypso Corer; DEPTH, sediment/rock; IMAGES V; Laboratory code/label; Marion Dufresne (1995); MD114; MD99-2251; Rockall
    Type: Dataset
    Format: text/tab-separated-values, 138 data points
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  • 10
    Publication Date: 2023-06-27
    Keywords: Age, 14C AMS; Age, comment; Age, dated; Age, dated material; Age, error; DEPTH, sediment/rock; Le Suroît; North Atlantic; PALEOCINAT; PC; Piston corer; SU90-03
    Type: Dataset
    Format: text/tab-separated-values, 138 data points
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