ALBERT

Description: Suspended Particulate Matter (SPM) is a major constituent in coastal waters, involved in processes such as light attenuation, pollutant propagation, and waterways blockage. The spatial distribution of SPM is an indicator of deposition and erosion patterns in estuaries and coastal zones and a necessary input to estimate the material fluxes from the land through rivers to the sea. In-situ methods to estimate SPM provide limited spatial data in comparison to the coverage that can be obtained remotely. Ocean color remote sensing complements field measurements by providing estimates of the spatial distributions of surface SPM concentration in natural waters, with high spatial and temporal resolution. Existing methods to obtain SPM from remote sensing vary between purely empirical ones to those that are based on radiative transfer theory together with empirical inputs regarding the optical properties of SPM. Most algorithms use a single satellite band that is switched to other bands for different ranges of turbidity. The necessity to switch bands is due to the saturation of reflectance as SPM concentration increases. Here we propose a multi-band approach for SPM retrievals that also provides an estimate of uncertainty, where the latter is based on both uncertainties in reflectance and in the assumed optical properties of SPM. The approach proposed is general and can be applied to any ocean color sensor or in-situ radiometer system with red and near-infra-red bands. We apply it to six globally distributed in-situ datasets of spectral water reflectance and SPM measurements over a wide range of SPM concentrations collected in estuaries and coastal environments (the focus regions of our study). Results show good performance for SPM retrieval at all ranges of concentration. As with all algorithms, better performance may be achieved by constraining empirical assumptions to specific environments. To demonstrate the flexibility of the algorithm we apply it to a remote sensing scene from an environment with highly variable sediment concentrations.

Description: The vertical distribution of irradiance in the ocean is a key input to quantify processes spanning from radiative warming, photosynthesis to photo-oxidation. Here we use a novel dataset of thousands local-noon downwelling irradiance at 490 nm (Ed(490)) and photosynthetically available radiation (PAR) profiles captured by 103 BGC-Argo floats spanning three years (from October 2012 to January 2016) in the world’s ocean, to evaluate several published algorithms and satellite products related to diffuse attenuation coefficient (Kd). Our results show: (1) MODIS-Aqua Kd(490) products derived from a blue-to-green algorithm and two semi-analytical algorithms show good consistency with the float-observed values, but the Chla-based one has overestimation in oligotrophic waters; (2) The Kd(PAR) model based on the Inherent Optical Properties (IOPs) performs well not only at sea-surface but also at depth, except for the oligotrophic waters where Kd(PAR) is underestimated below two penetration depth (2zpd), due to the model’s assumption of a homogeneous distribution of IOPs in the water column which is not true in most oligotrophic waters with deep chlorophyll-a maxima; (3) In addition, published algorithms for the 1% euphotic-layer depth and the depth of 0.415 mol photons m−2 d−1 isolume are evaluated. Algorithms based on Chla generally work well while IOPs-based ones exhibit an overestimation issue in stratified and oligotrophic waters, due to the underestimation of Kd(PAR) at depth.

Description: This paper reviews the state of the art of protocols for the measurement of downwelling irradiance in the context of Fiducial Reference Measurements (FRM) of water reflectance for satellite validation. The measurement of water reflectance requires the measurement of water-leaving radiance and downwelling irradiance just above water. For the latter, there are four generic families of method, using: (1) an above-water upward-pointing irradiance sensor; (2) an above-water downward-pointing radiance sensor and a reflective plaque; (3) a Sun-pointing radiance sensor (sunphotometer); or (4) an underwater upward-pointing irradiance sensor deployed at different depths. Each method—except for the fourth, which is considered obsolete for the measurement of above-water downwelling irradiance—is described generically in the FRM context with reference to the measurement equation, documented implementations, and the intra-method diversity of deployment platform and practice. Ideal measurement conditions are stated, practical recommendations are provided on best practice, and guidelines for estimating the measurement uncertainty are provided for each protocol-related component of the measurement uncertainty budget. The state of the art for the measurement of downwelling irradiance is summarized, future perspectives are outlined, and key debates such as the use of reflectance plaques with calibrated or uncalibrated radiometers are presented. This review is based on the practice and studies of the aquatic optics community and the validation of water reflectance, but is also relevant to land radiation monitoring and the validation of satellite-derived land surface reflectance.

Description: This paper reviews the state of the art of protocols for measurement of waterleaving radiance in the context of fiducial reference measurements (FRM) of water reflectance for satellite validation. Measurement of water reflectance requires the measurement of waterleaving radiance and downwelling irradiance just above water. For the former there are four generic families of method, based on: 1) underwater radiometry at fixed depths; or 2) underwater radiometry with vertical profiling; or 3) abovewater radiometry with skyglint correction; or 4) onwater radiometry with skylight blocked. Each method is described generically in the FRM context with reference to the measurement equation, documented implementations and the intramethod diversity of deployment platform and practice. Ideal measurement conditions are stated, practical recommendations are provided on best practice and guidelines for estimating the measurement uncertainty are provided for each protocolrelated component of the measurement uncertainty budget. The state of the art for measurement of waterleaving radiance is summarized, future perspectives are outlined, and the question of which method is best adapted to various circumstances (water type, wavelength) is discussed. This review is based on practice and papers of the aquatic optics community for the validation of water reflectance estimated from satellite data but can be relevant also for other applications such as the development or validation of algorithms for remote-sensing estimation of water constituents including chlorophyll a concentration, inherent optical properties and related products.

Description: Phytoplankton in the ocean are extremely diverse. The abundance of various intracellular pigments are often used to study phytoplankton physiology and ecology, and identify and quantify different phytoplankton groups. In this study, phytoplankton absorption spectra ( a p h ( λ ) ) derived from underway flow-through AC-S measurements in the Fram Strait are combined with phytoplankton pigment measurements analyzed by high-performance liquid chromatography (HPLC) to evaluate the retrieval of various pigment concentrations at high spatial resolution. The performances of two approaches, Gaussian decomposition and the matrix inversion technique are investigated and compared. Our study is the first to apply the matrix inversion technique to underway spectrophotometry data. We find that Gaussian decomposition provides good estimates (median absolute percentage error, MPE 21–34%) of total chlorophyll-a (TChl-a), total chlorophyll-b (TChl-b), the combination of chlorophyll-c1 and -c2 (Chl-c1/2), photoprotective (PPC) and photosynthetic carotenoids (PSC). This method outperformed one of the matrix inversion algorithms, i.e., singular value decomposition combined with non-negative least squares (SVD-NNLS), in retrieving TChl-b, Chl-c1/2, PSC, and PPC. However, SVD-NNLS enables robust retrievals of specific carotenoids (MPE 37–65%), i.e., fucoxanthin, diadinoxanthin and 19 ′ -hexanoyloxyfucoxanthin, which is currently not accomplished by Gaussian decomposition. More robust predictions are obtained using the Gaussian decomposition method when the observed a p h ( λ ) is normalized by the package effect index at 675 nm. The latter is determined as a function of “packaged” a p h ( 675 ) and TChl-a concentration, which shows potential for improving pigment retrieval accuracy by the combined use of a p h ( λ ) and TChl-a concentration data. To generate robust estimation statistics for the matrix inversion technique, we combine leave-one-out cross-validation with data perturbations. We find that both approaches provide useful information on pigment distributions, and hence, phytoplankton community composition indicators, at a spatial resolution much finer than that can be achieved with discrete samples.

Description: We report the first radiative transfer model that is able to simulate phytoplankton fluorescence with both photochemical and non-photochemical quenching included. The fluorescence source term in the inelastic radiative transfer equation is proportional to both the quantum yield and scalar irradiance at excitation wavelengths. The photochemical and nonphotochemical quenching processes change the quantum yield based on the photosynthetic active radiation. A sensitivity study was performed to demonstrate the dependence of the fluorescence signal on chlorophyll a concentration, aerosol optical depths and solar zenith angles. This work enables us to better model the phytoplankton fluorescence, which can be used in the design of new space-based sensors that can provide sufficient sensitivity to detect the phytoplankton fluorescence signal. It could also lead to more accurate remote sensing algorithms for the study of phytoplankton physiology.