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  • PANGAEA  (7)
  • Wiley  (5)
  • Copernicus Publications (EGU)  (2)
  • Cushman Foundation for Foraminiferal Research  (2)
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  • 1
    Publication Date: 2019
    Description: ABSTRACT Planktonic foraminiferal species identification is central to many paleoceanographic studies, from selecting species for geochemical research to elucidating the biotic dynamics of microfossil communities relevant to physical oceanographic processes and interconnected phenomena such as climate change. However, few resources exist to train students in the difficult task of discerning amongst closely related species, resulting in diverging taxonomic schools that differ in species concepts and boundaries. This problem is exacerbated by the limited number of taxonomic experts. Here, we document our initial progress towards removing these confounding and/or rate‐limiting factors by generating the first extensive image library of modern planktonic foraminifera, providing digital taxonomic training tools and resources, and automating species‐level taxonomic identification of planktonic foraminifera via machine learning using convolution neural networks. Experts identified 34,640 images of modern (extant) planktonic foraminifera to the species level. These images are served as species exemplars through the online portal Endless Forams (endlessforams.org) and a taxonomic training portal hosted on the citizen science platform Zooniverse (zooniverse.org/projects/ahsiang/endless‐forams/). A supervised machine learning classifier was then trained with ~27,000 images of these identified planktonic foraminifera. The best‐performing model provided the correct species name for an image in the validation set 87.4% of the time, and included the correct name in its top three guesses 97.7% of the time. Together, these resources provide a rigorous set of training tools in modern planktonic foraminiferal taxonomy and a means of rapidly generating assemblage data via machine learning in future studies for applications such as paleotemperature reconstruction and salinity indicator counting.
    Print ISSN: 0883-8305
    Electronic ISSN: 2572-4525
    Topics: Geosciences
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 2
    Publication Date: 2018
    Description: 〈span〉〈div〉Abstract〈/div〉Habitat patterns of subtropical and tropical planktic foraminifers in the Caribbean Sea were obtained from plankton samples collected in spring 2009 and 2013. The spatial distribution in surface waters (3.5 m water depth) and depth habitat patterns (surface to 400 m) of 33 species were compared with prevailing water-mass conditions (temperature, salinity, and chlorophyll-〈span〉a〈/span〉 concentration) and planktic foraminiferal test assemblages in surface sediments. Distribution patterns indicate a significant relationship with seawater temperature and trophic conditions. A reduction in standing stocks was observed close to the Orinoco River plume and in the Gulf of Paria, associated with high turbidity and concomitant low surface-water salinity. In contrast, a transient mesoscale patch of high chlorophyll concentration in the eastern Caribbean Sea was associated with higher standing stocks in near surface waters, including high abundances of 〈span〉Globigerinita glutinata〈/span〉 and 〈span〉Neogloboquadrina dutertrei〈/span〉. 〈span〉Globorotalia truncatulinoides〈/span〉 mainly lives close to the seasonal pycnocline and can be linked to winter conditions indicated by lower sea-surface temperatures (SSTs) of ∼20°C. 〈span〉Globigerinoides sacculifer〈/span〉 and 〈span〉Globoturborotalita rubescens〈/span〉 were associated with oligotrophic conditions in the pelagic Caribbean Sea during early spring and showed a synodic lunar reproduction cycle. The live assemblages in the water column from 2009 and 2013 were similar to those reported in earlier studies from the 1960s and 1990s and to assemblages of tests in the surface sediments. Minor differences in faunal proportions were attributed to seasonal variability and environmental differences at the local scale. An exception was the low relative abundance of 〈span〉Globigerinoides ruber〈/span〉 in the Caribbean Sea in 2009 compared to surface sediment samples and plankton net samples collected in the 1960s and 1990s. Decreasing abundance of 〈span〉Gs. ruber〈/span〉 white in the Caribbean Sea may be associated with increasing SSTs over past decades and changes in nutrient flux and primary production.〈/span〉
    Print ISSN: 0096-1191
    Electronic ISSN: 1943-264X
    Topics: Geosciences
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  • 3
    Publication Date: 2019
    Description: Abstract Homogeneity, mass fractions of about forty trace elements and Sr isotope composition of Ca carbonate reference materials (RMs) between original and nano‐powdered pellets are compared. Our results using nanosecond and femtosecond LA‐(MC)‐ICP‐MS show that the nano‐pellets of the RMs MACS‐3NP, JCp‐1NP and JCt‐1NP are about a factor of 2–3 more homogeneous than the original samples MACS‐3, JCp‐1 and JCt‐1, and are therefore much more suitable for microanalytical purposes. With the exception of Si, the mass fractions of the synthetic RM MACS‐3 agree with its fine‐grained analogue MACS‐3NP. Very small, but significant, differences between original and nano‐pellets are observed in the RMs JCp‐1 and JCt‐1 for some trace elements with very low contents, indicating the need for re‐certification. Strontium mass fractions in the analysed RMs are high (1500–7000 mg kg‐1) and their isotope compositions determined by LA‐MC‐ICP‐MS in the original and the nano‐pellets agree within uncertainty limits. This article is protected by copyright. All rights reserved.
    Print ISSN: 1639-4488
    Electronic ISSN: 1751-908X
    Topics: Geosciences
    Published by Wiley
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  • 4
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  • 6
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    Cushman Foundation for Foraminiferal Research
    In:  Journal of Foraminiferal Research, 48 (3). pp. 251-272.
    Publication Date: 2021-02-08
    Description: Habitat patterns of subtropical and tropical planktic foraminifers in the Caribbean Sea were obtained from plankton samples collected in spring 2009 and 2013. The spatial distribution in surface waters (3.5 m water depth) and depth habitat patterns (surface to 400 m) of 33 species were compared with prevailing water-mass conditions (temperature, salinity, and chlorophyll-a concentration) and planktic foraminiferal test assemblages in surface sediments. Distribution patterns indicate a significant relationship with seawater temperature and trophic conditions. A reduction in standing stocks was observed close to the Orinoco River plume and in the Gulf of Paria, associated with high turbidity and concomitant low surface-water salinity. In contrast, a transient mesoscale patch of high chlorophyll concentration in the eastern Caribbean Sea was associated with higher standing stocks in near surface waters, including high abundances of Globigerinita glutinata and Neogloboquadrina dutertrei. Globorotalia truncatulinoides mainly lives close to the seasonal pycnocline and can be linked to winter conditions indicated by lower sea-surface temperatures (SSTs) of ∼20°C. Globigerinoides sacculifer and Globoturborotalita rubescens were associated with oligotrophic conditions in the pelagic Caribbean Sea during early spring and showed a synodic lunar reproduction cycle. The live assemblages in the water column from 2009 and 2013 were similar to those reported in earlier studies from the 1960s and 1990s and to assemblages of tests in the surface sediments. Minor differences in faunal proportions were attributed to seasonal variability and environmental differences at the local scale. An exception was the low relative abundance of Globigerinoides ruber in the Caribbean Sea in 2009 compared to surface sediment samples and plankton net samples collected in the 1960s and 1990s. Decreasing abundance of Gs. ruber white in the Caribbean Sea may be associated with increasing SSTs over past decades and changes in nutrient flux and primary production.
    Type: Article , PeerReviewed
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  • 7
    Publication Date: 2021-03-18
    Description: Past ocean temperatures and salinities can be approximated from combined stable oxygen isotopes (δ18O) and Mg ∕ Ca measurements in fossil foraminiferal tests with varying success. To further refine this approach, we collected living planktic foraminifers by net sampling and pumping of sea surface water from the Caribbean Sea, the eastern Gulf of Mexico and the Florida Straits. Analyses of δ18O and Mg ∕ Ca in eight living planktic species (Globigerinoides sacculifer, Orbulina universa, Neogloboquadrina dutertrei, Pulleniatina obliquiloculata, Globorotalia menardii, Globorotalia ungulata, Globorotalia truncatulinoides and Globorotalia tumida) were compared to measured in situ properties of the ambient seawater (temperature, salinity and δ18Oseawater) and fossil tests of underlying surface sediments. “Vital effects” such as symbiont activity and test growth cause δ18O disequilibria with respect to the ambient seawater and a large scatter in foraminiferal Mg ∕ Ca. Overall, ocean temperature is the most prominent environmental influence on δ18Ocalcite and Mg ∕ Ca. Enrichment of the heavier 18O isotope in living specimens below the mixed layer and in fossil tests is clearly related to lowered in situ temperatures and gametogenic calcification. Mg ∕ Ca-based temperature estimates of G. sacculifer indicate seasonal maximum accumulation rates on the seafloor in early spring (March) at Caribbean stations and later in the year (May) in the Florida Straits, related to the respective mixed layer temperatures of ∼26 ∘C. Notably, G. sacculifer reveals a weak positive linear relationship between foraminiferal derived δ18Oseawater estimates and both measured in situ δ18Oseawater and salinity. Our results affirm the applicability of existing δ18O and Mg ∕ Ca calibrations for the reconstruction of past ocean temperatures and δ18Oseawater reflecting salinity due to the convincing accordance of proxy data in both living and fossil foraminifers, and in situ environmental parameters. Large vital effects and seasonally varying proxy signals, however, need to be taken into account.
    Type: Article , PeerReviewed
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  • 8
    Publication Date: 2022-01-31
    Description: Determination of Mg/Ca in foraminifer shells as a proxy of seawater temperature is of particular interest in paleoclimate reconstruction. Here we show that femtosecond–200 nm–laser ablation–inductively coupled plasma–mass spectrometry is a suitable technique to precisely and accurately determine Mg/Ca in the micrometer-sized calcareous chambers of foraminifers. At low fluence (0.3–0.6 J/cm 2 ) the double-charged 44 Ca ++ and the single-charged 25 Mg + ions are measured nearly simultaneously. Integrated single-shot measurements using a pulse repetition rate of 1 Hz enable precise analyses at a depth resolution of about 50–100 nm/pulse corresponding to an ablated material of 0.3–0.6 ng calcite/pulse for a spot size of 55 μm. High-resolution analyses can be performed until a depth of 10–20 μm and thus particularly suitable for thin-shelled foraminifers. Reproducibility (relative standard deviation) is about 5% as approved by homogeneous reference materials. Calibration is performed with the microanalytical synthetic reference material MACS-3. Magnesium and Ca data of different carbonate and silicate reference materials agree within uncertainties with reference values. The procedure has been successfully applied for detailed analyses of single chambers and shell-depth profiles of live individuals and empty planktic and benthic foraminifer tests from different ocean basins.
    Type: Article , PeerReviewed
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  • 9
    Publication Date: 2022-04-06
    Description: The state of a population of planktic foraminifers at a certain time reflects multiple processes in the upper ocean, including environmental conditions to which the population was exposed during its growth, the age of the cohorts, and spatiotemporal patchiness. We carried out depth-stratified (0–60, 60–100m) replicated sampling off Puerto Rico in autumn 2012, revisiting three stations previously sampled in autumn 1994 and spring 1995, in order to analyze seasonal and interannual variability of planktic foraminifers and the stable isotopic composition of their tests. The merged dataset from all three sampling campaigns allows us to assess short- and long-term changes in foraminiferal population dynamics and the spatial assemblage coherency along the shelf edge. All three sample series cover more than 2 weeks during either spring (1995) or autumn (1994, 2012) and include the time of the full moon when reproduction of some surface-dwelling planktic foraminifers has been postulated to take place. Our analyses indicate that interannual variability affected the faunal composition,andbothautumnassemblageswerecharacterizedbyoligotrophictropicalspecies,dominatedbyTrilobatus sacculifer and Globigerinoides ruber (white and pink variety). However, G. ruber (white) had a higher abundance in 1994 (37%) than in 2012 (3.5%), which may be partially due to increasing sea surface temperatures sincethe1990s.Between60and100mwaterdepth,adifferentfaunalcompositionwithaspecificstableoxygen isotope signature provides evidence for the presence of the Subtropical Underwater at the sampling site. MeasurementsonT.sacculifersampledinautumn2012revealedthattestsize,calcificationandincidenceofsac-like chamberscontinuedtoincreaseafterfullmoon,andthusnorelationtothesynodiclunarreproductioncyclewas recognized.Duringautumn2012,outerbandsofhurricaneSandypassedtheGreaterAntillesandlikelyaffected the foraminifers. Lower standing stocks of living planktic foraminifers and lower stable carbon isotope values from individuals collected in the mixed layer likely indicate the response to increased rainfall and turbidity in the wake of the hurricane.
    Type: Article , PeerReviewed
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  • 10
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    PANGAEA
    In:  Supplement to: Bahr, André; Schönfeld, Joachim; Hoffmann, Julia; Voigt, Silke; Aurahs, Ralf; Kucera, Michal; Flögel, Sascha; Jentzen, Anna; Gerdes, Axel (2013): Comparison of Ba/Ca and d18Owater as freshwater proxies: A multi-species core-top study on planktonic foraminifera from the vicinity of the Orinoco River mouth. Earth and Planetary Science Letters, 383, 45-57, https://doi.org/10.1016/j.epsl.2013.09.036
    Publication Date: 2023-07-14
    Description: Past river run-off is an important measure for the continental hydrological cycle and the as-sessment of freshwater input into the ocean. However, paleosalinity reconstructions applying different proxies in parallel often show offsets between the respective methods. Here, we compare the established foraminiferal Ba/Ca and d18OWATER salinity proxies for their capability to record the highly seasonal Orinoco freshwater plume in the eastern Caribbean. For this purpose we obtained a data set comprising Ba/Ca and d18OWATER determined on multiple spe-cies of planktonic foraminifera from core tops distributed around the Orinoco river mouth. Our findings indicate that interpretations based on either proxy could lead to different conclu-sions. In particular, Ba/Ca and d18OWATER diverge in their spatial distribution due to different governing factors. Apparently, the Orinoco freshwater plume is best tracked by Ba/Ca ratios of G. ruber (pink and sensu lato morphotypes), while d18OWATER based on the same species is more related to the local precipitation-evaporation balance overprinting the riverine freshwater contribution. Other shallow dwelling species (G. sacculifer, O. universa) show a muted response to the freshwater discharge, most likely due to their ecological and habitat prefer-ences. Extremely high Ba/Ca ratios recorded by G. ruber are attributed to Ba2+-desorption from suspended matter derived from the Orinoco. Samples taken most proximal to the freshwater source do not show pronounced Ba/Ca or d18OWATER anomalies. Here, the suspension loaded freshwater lid developing during maximum discharge suppresses foraminiferal populations. Both proxies are therefore biased towards dry season conditions at these sites, when surface salinity is only minimally reduced.
    Type: Dataset
    Format: application/zip, 3 datasets
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