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  • Chemistry  (3)
  • 1985-1989  (3)
  • 1
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Biopolymers 26 (1987), S. 1555-1572 
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The synthesis, CD, ir spectroscopic, and conformational studies of a series of bridged cyclic peptides of the general formula, cyclo[NH-(CH2)n-CO-Gly-Pro-Y-Gly] (2a-d, Y = Gly or Ser(OBut), n = 4 or 2) is reported. As indicated by difference nuclear Overhauser enhancement and Fourier transform ir experiments, the tetrapeptide sequence of cyclo[NH-(CH2)4-CO-Gly-Pro-Gly-Gly] (2a) and cyclo[NH-(CH2)2-CO-Gly-Pro-Gly-Gly] (2b) adopts a 1 ← 4 hydrogenbonded type II β-turn conformation in solution, while cyclo[NH-(CH2)4-CO-Gly-Pro-Ser(OBut) -Gly] (2c) features a type I β-turn, fixed by 1 ← 4 and Oγ … NH intramolecular H bonds. In aqueous solution 2a and 2c show class B and class C CD spectra, respectively. This is the first case reported of a typical class C CD pattern in aqueous solution for a conformationally mobile system having a type I β-turn. Based on the comparison of the band intensities of the bridged models with those of linear and cyclic model systems reported earlier, a set of subspectra with reduced band intensities is suggested for use in the CD analysis of the conformation of polypeptides in solution.
    Additional Material: 4 Ill.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The synthesis of a series of protected tetrapeptides of the general formula Cbz-Gly-X2-Y3-Gly-OR (R = stearyl or methyl, X and/or Y = proline) is described. Detailed CD studies have been performed to evaluate the contribution of proline-containing β-turns to the CD spectra of proteins. The CD spectra of all the models are dominated by the chiral contribution of the proline residue. In polar, proton-donating solvents, a poly-proline II-like spectrum was observed in almost all cases. The tetrapeptide model Cbz-Gly-Gly-Pro-Gly-OStearyl, in acetonitrile shows a type C spectrum that has not been previously reported for linear peptides. The ir and nmr data on this model support the assumption of that of a type III β-turn, exhibiting a type C spectrum, participate in the conformational equilibrium. The most interesting finding of the CD studies is the observation of a type D spectrum (according to the classification of Woody [Woody, R. W. (1974) in Peptides, Polypeptides and Proteins, Blout, E. R. Bovey, F. A. Lotan, N. & Goodman, M. (Eds.), Wiley, New York]) for models Cbz-Gly-Pro-Asp(OBut)-Gly-OStearyl and Cbz-Gly-Pro-Ser(OBut)-Gly-OStearyl in cyclohexane. The results of the CD measurements ae discussed in correlation with ir and nmr data and with recent literature.
    Additional Material: 8 Ill.
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  • 3
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Biopolymers 26 (1987), S. 1527-1553 
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Tetrapeptides, Cbz-Gly-X-Y-Gly-OSt (1-4) - as well as cyclic systems, cyclo[NH-(CH2)n-CO-Gly-Ser(OX)-Ser(OX)-Gly] (5 and 6; n = 4 and 2, X = But or H), have been synthesized in order to compare the CD spectrum of linear and cyclic β-turn models containing either a protected or a free hydroxyl of the serine residue. In extremely dilute cyclohexane solution the linear models Cbz-Gly-Ser-Y-Gly-OSt (1-3a) show class B spectra with very strong positive bands, contrary to other members of the series. Based on 200-MHz 1H nuclear overhauser enhancement and Fourier transform ir studies, Cbz-Gly-Ser-Ser(OBut)-Gly-OSt (3a) in dilute chloroform solution assumes a distorted type II β-turn conformation fixed by an extended system of intramolecular H bonds. As evidenced by 1H-nmr and FT-IR experiments, the cyclic model cyclo[NH-(CH2)4-CO-Gly-Ser(OBut)- Ser(OBut)-Gly] (5a) in a 1 : 1 mixture of (CD3)2SO-CDCl3 is also characterized by a type II β-turn encompassing the Ser3(OBut)-Gly4 sequence. In water, a class B pattern was measured for this model, in good agreement with theoretical and experimental studies that show that type II β-turns are generally characterized by class B spectra. In the protected and free OH cyclic models, cyclo[NH-(CH2)2-CO-Gly-Ser(OX)-Ser(OX)-Gly] (5b and 6b, X = But or H) distortions of the peptide backbone due to the loss of two CH2 groups result in the appearance of CD spectra characterized by a strong negative band near 200 nm, interpreted as a sign of the lack of β-turn structures in these models. This observation, together with other CD data discussed in this paper, clearly show that the CD of serine-containing β-turn sequences strongly depends on long-range backbone and local side-chain interactions.
    Additional Material: 9 Ill.
    Type of Medium: Electronic Resource
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