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  • Articles  (303)
  • Computational Chemistry and Molecular Modeling  (302)
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  • 1985-1989  (303)
  • 1
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 36 (1989), S. 341-351 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An alternative scheme for ab initio polymer band structure calculations based on a Filon-type quadrature is proposed. This scheme avoids the explicit calculation and the storage of the “troublesome” Fourier transforms of the LCAO density matrix elements and is a first step towards a better control of the convergence of the different lattice sums appearing in the configuration space LCAO-SCF-CO method. The potential of the proposed technique is illustrated by a minimal basis set calculations on an infinite chain of H atoms.
    Additional Material: 2 Tab.
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  • 2
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Proton affinities (PAs) of 2-, 3-, and 4-monosubstituted pyridines in the gas phase are calculated using the MINDO/3, MNDO, and AM1 methods. The following substituents are considered: F, Cl, CN, CH3, CF3, CHO, NO2, NH2, N(CH3)2, OCH3, and SCH3. The results are compared with experimental values. It is found that all MINDO/3 PAs are ca. 6% too high (mean value) compared to the experimental results; on the other hand, the MNDO values are ca. 7% too low (mean value). However, a much better agreement has been observed for the AM1 method where the theoretical values are only ca. 2.4% too low (mean value). Correlations between the calculated proton affinities on one hand and the charges on the acid H atom and Hammett constants on the other hand are studied. Particularly good linear relationships are found for the 4-monosubstituted compounds within the AM1 formalism.
    Additional Material: 11 Ill.
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  • 3
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 33 (1988), S. 61-68 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A possible reaction path for the polymorphic transformation of trans-trans solid diacetamide into its trans-cis from is envisaged. A description of the two crystalline forms in the same crystallographic system is adopted, and the energy profile of the crystallographic reaction path is calculated by using an empirical 6-exp. atom-atom potential method and a 6-13G ab initio procedure for the inter- and intramolecular contributions, respectively. Two barriers appear along the reaction path. The first corresponds to the destruction of the trans-trans chains and the second to the formation of the trans-cis dimers. These barriers, being lower than the acetyl rotation barier, are in agreement with the ability to isomerize diacetamide in solid state. The presence of a small energy minimum between these barriers would suggest the existence of an intermediate crystallographic form.
    Additional Material: 3 Ill.
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  • 4
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 28 (1985), S. 421-428 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We have analyzed the dependence of the serotonin receptor binding affinity on the electronic and steric reactivity indexes for a group of 5-substituted tryptamines. The approaches employed are a new nonempirical Quantitative Structure - Activity relationship approach and multiple regression analyses. The results suggest that the variation of the receptor binding affinity in 5-substituted tryptamines is related to the variation of the net charge of two atoms and to the steric bulk of the N-substituent. A receptor model is proposed.
    Additional Material: 4 Ill.
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  • 5
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 32 (1987), S. 133-147 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The symmetry adaptation procedure of Chen et al. [Sciencia Sinica 23, 1116 (1980)], which can account for the invariance properties of the Hamiltonian with respect to any finite point group G, is both modified and adapted to the Clifford algebra unitary group approach (CAUGA). From orthogonal symmetry adapted Mo's, one first constructs a pure configuration many-electron basis adapted to the chain U(ni) ⊃ G ⊃ G(s) in terms of the U(ni) Gel'fand-Tsetlin (GT) basis, where ni is the dimension of the irrep defining a given pure configuration, and G(s) designates the canonical chain supplying a unique labeling. The pure configuration basis is then coupled to the desired G-adapted states using the point group Clebsch-Gordan coefficients and the U(n1) ⊂ U(n1 + n2) ⊂ … ⊂ U(n) basis by using the permutation group outer-product reduction coefficients. This basis can be expressed in terms of the U(n) GT basis by using the U(n) subduction coefficients (SAC'S). The SDC'S are particularly simple for the highest weight states (Hess's) of various subproblems, which can be in turn represented through the U(2n) two-box Weyl tableaux of CAUGA. The non-HWS's are obtained by applying the U(ni) lowering generators to the HWS's. In this way we can directly obtain the spin and point group adapted CAUGA basis. The procedure is illustrated on a nontrivial example.
    Additional Material: 3 Tab.
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  • 6
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 34 (1988), S. 289-300 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It is shown how the properties of the one-particle Green's function lead naturally to the definition of the so-called natural energy orbitals. These orbitals allow the fully correlated total energy of a system to be written in Hartree-Fock-like fashion and might therefore provide a bridge between sophisticated correlated wave functions and approximate theories of chemical structure and reactivity based on a Hartree-Fock-like energy expression. Moreover these orbitals form the basis for a self-consistent scheme to calculate the one-particle Green's function. The relation between these natural energy orbitals and the extended Koopmans' theorem is considered. Finally it is shown that the exactness of the lowest extended Koopmans' ionization potential implies the linear independence of the corresponding Dyson orbital from all other Dyson orbitals.
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  • 7
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 29 (1986), S. 1117-1126 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Electron transmission spectroscopy (ETS) and bound-state and continuum multiple-scattering Xα (MS-Xα) calculations are employed to characterize the unoccupied a′2, a′1 and e′ orbitals of BF3 and BCl3. The a′2 orbital of BF3, which produces a peak about 7 eV below threshold in the x-ray absorption spectrum (XAS), generates a scattering resonance at 3.5 eV in ETS. Similarly, the e′ orbital that lies about 2 eV above threshold in XAS occurs about 13-16 eV above threshold in ETS. Dissociation of F- from BF3 due to electron attachment is attributed to a core-excited shape resonance involving an e″ → a″2 excitation and electron capture into the a′2 orbital. In BCl3 all the unoccupied orbitals lie at lower energy than in BF3 and are closely spaced, making definitive spectral assignments difficult. Both Hartree-Fock (HF) and MS-Xα methods apparently underestimate the stability of the unoccupied e′ orbital of BCl3. Vibronic coupling due to out-of-plane bending may significantly affect the spectral intensities. Feshbach resonances are observed for BCl3 at energies close to those observed in the vacum-UV absorption spectrum. The lower energies of the unoccupied orbitals of BCl3 are consistent with their stronger bonding to nucleophiles.
    Additional Material: 5 Ill.
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  • 8
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: This paper analyzes the use of electric-field-variant (EFV) atomic orbitals in calculations of molecular polarizabilities using the finite field approximation. It is shown that, in the absence of an external electric field, the optimal positions of the orbital centers which minimize the total energy are already shifted with respect to the atomic sites and that these optimal positions constitute a better starting point to compute molecular polarizabilities by the finite field method. The technique is applied to the hydrogen molecule and to the alkane series CnH2n+2, n = 1, 2, 3, 4, 5, 6 in the framework of a floating spherical gaussian orbital-EFV basis.
    Additional Material: 5 Ill.
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  • 9
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: Conformational energy profiles were calculated for τ1, the C—C—C=O torsion, and τ2, the C—C—C—C torsion, of methyl butanoate, using Pulay's ab initio gradient procedure at the 4-21G level with geometry optimization at each point. In addition, the structures of seven conformations were fully relaxed, including the energy minima (τ1, τ2) = (0, -60), (0, 180), (120, 180), (120, -60), and the maxima (0, 0), (180, 180), and (60, -60). The calculated geometries confirm the previously formulated rule that, in saturated hydrocarbons, a C—H bond trans to a C—C bond (C—Hs) is consistently shorter than a C—H bond (C—Ha) trans to another C—H bond. Specifically, for X—C(α) (= O)—C(β)—C(γ)—C(δ) systems, the following rules can be formulated, incorporating results from previous studies of butanal, butanoic acid, and 2-pentanone: (1) C(δ)—Hs 〈 C(δ)—Ha in all the conformers in which the δ-methyl group is remote from the ester group; whereas, in all the conformers in which nonbonded interactions are possible between the C(δ)-methyl and the ester groups, the bonding pattern is affected by a C—H⃛O=C interaction. (2) In the most stable conformers, (0, 60), C(β)—Ha 〈 C(β)—Hs, and C(γ)—Ha 〈 C(γ)—Hs, regardless of X. (3) The average C—C bonds in the τ2 = 180° conformers are consistently shorter than those with τ2 = 60° (compared at τ1 constant). In the most stable conformations (τ1 = 0°, τ2 = 60° or 180°), the bonding sequence is consistently C(α)—C(β) 〈 C(β)—C(γ) 〈 C(γ)—C(δ); whereas, when τ1 = 120°, C(α)—C(β) 〈 C(β)—C(γ) 〉 C(γ)—C(δ).
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  • 10
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Computational Chemistry 7 (1986), S. 201-207 
    ISSN: 0192-8651
    Keywords: Computational Chemistry and Molecular Modeling ; Biochemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Computer Science
    Notes: A direct minimization method previously presented by the authors is applied here to biconfigurational wave functions. A very moderate increasing in the time by iteration with respect to the one-determinant calculation and good convergence properties have been found. So qualitatively correct studies on singlet systems with strong biradical character can be performed with a cost similar to that required by Hartree-Fock calculations.
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