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  • maize  (2)
  • pH  (2)
  • Springer  (4)
  • 1985-1989  (4)
  • 1955-1959
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  • Springer  (4)
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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Plant molecular biology 11 (1988), S. 173-182 
    ISSN: 1573-5028
    Keywords: ARS ; maize ; DNA sequence
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract There maize nuclear DNA fragments were isolated on the basis of their ability to confer replication on chimeric plasmids in yeast. These Eco RI fragments of 2.5, 2.8 and 5.5 kb are repeated elements within the maize genome. The 2.5 and 2.8 kb fragments represent a family of elements repeated 11 000 times in the maize haploid genome, while the 5.5 kb fragment is part of another family of 28 000 elements. These fragments were subcloned to further define the unique region of ARS activity. The sequence of each 550–650 bp ARS subclone is reported here, and compared to the flanking regions which do not show ARS activity. The ARS elements are 65–70% A+T as compared to 50–55% for the maize genome as a whole. There is approximately 15% sequence divergence, as well as variation of ARS efficiency, among family members. ARS subclones contain the proposed yeast consensus sequence.
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  • 2
    ISSN: 1573-5028
    Keywords: ars ; genome organization ; maize ; repeated DNA ; replication
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Maize nuclear DNA sequences capable of promoting the autonomous replication of plasmids in yeast were isolated by ligating Eco RI-digested fragments into yeast vectors unable to replicate autonomously. Three such autonomously replicating sequences (ARS), representing two families of highly repeated sequences within the maize genome, were isolated and characterized. Each repetitive family shows hybridization patterns on a Southern blot characteristic of a dispersed sequence. Unlike most repetitive sequences in maize, both ARS families have a constant copy number and characteristic genomic hybridization pattern in the inbred lines examined. Larger genome clones with sequence homology to the ARS-containing elements were selected from a lambda library of maize genomic DNA. There was typically only one copy of an ARS-homologous sequence on each 12–15 kb genomic fragment.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Hydrobiologia 120 (1985), S. 69-87 
    ISSN: 1573-5117
    Keywords: diatoms ; lake acidification ; acidic precipitation ; paleolimnology ; pH
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The pH history of lakes can be inferred from diatom remains in dated sediment cores. To derive transfer functions for pH inference in acidic lakes, we counted diatoms in surface-sediment from 31 soft-water lakes in n. New England (NE) and 36 in Norway (N), covering pH 4.4–7.1. Cluster analysis of each data set indicates that pH 6 is an upper limit for a group of similar diatom assemblages. For each set, we developed multiple linear regressions to relate three versions of the diatom data to pH of surface-waters: (1) relative frequencies of selected diatom taxa, (2) the first principal component (1 PC) of these frequencies, and (3) the frequencies of Hustedt pH groups. Also, simple linear regressions were developed for two versions: (1) Index B and (2) Index Alpha, both based on pH groups. Regressions were run separately for lakes with pH ≤ 6; these are most relevant for pH inference in acidic lakes. The best regressions (N: taxa & 1 PC taxa) have r2 0.69–0.91 and Se 0.24–0.31 pH units, the worst (NE: log alpha) have r2 0.27–0.57 and Se 0.51. In all cases, errors for NE are greater than N, partly due to greater diversity of NE lakes. Regressions based on pH groups (directly & by indices) have smaller r2 and larger Se than those based on taxa and 1 taxa. The Index Alpha is least useful because its requirement for alkaline diatom units is unsatisfied at many acidic lakes. Regressions based on taxa may give erratic pH inferences due to sensitivity to unusual frequencies of individual taxa; this effect is reduced by using 1 PC taxa. Four regressions based on pH ≤ 6 lakes were used for inferring pH in a 210Pb dated core from Nedre Målmesvatn, N (now pH 4.6). There is good agreement among three of the four (not for the regression based directly on taxa) that there has been a decrease of ca. 0.6 pH units starting in the late 1800's.
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  • 4
    Electronic Resource
    Electronic Resource
    Springer
    Journal of bioenergetics and biomembranes 20 (1988), S. 571-584 
    ISSN: 1573-6881
    Keywords: (Na+ + K+)-ATPase ; 3-O-methylfluorescein phosphate ; nitrophenyl phosphate ; dimenthyl sulfoxide ; Pi ; pH
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract With 3-O-methylfluorescein phosphate (3-OMFP) as substrate for the phosphatase reaction catalyzed by the (Na+ + K+)-ATPase, a number of properties of that reaction differ from those with the common substratep-nitrophenyl phosphate (NPP): theK m is 2 orders of magnitude less and the Vmax is two times greater, and dimethyl sulfoxide (Me2SO) inhibits rather than stimulates. In addition, reducing the incubation pH decreases both theK m and Vmax for K+-activated 3-OMFP hydrolysis as well as theK 0.5 for K+ activation. However, reducing the incubation pH increases inhibition by Pi and the Vmax for 3-OMFP hydrolysis in the absence of K+. When choline chloride is varied reciprocally with NaCl to maintain the ionic strength constant, NaCl inhibits K+-activated 3-OMFP hydrolysis modestly with 10 mM KCl, but stimulates (in the range 5–30 mM NaCl) with suboptimal (0.35 mM) KCl. In the absence of K+, however, NaCl stimulates increasingly over the range 5–100 mM when the ionic strength is held constant. These observations are interpreted in terms of (a) differential effects of the ligands on enzyme conformations; (b) alternative reaction pathways in the absence of Na+, with a faster, phosphorylating pathway more readily available to 3-OMFP than to NPP; and (c) a (Na+ + K+)-phosphatase pathway, most apparent at suboptimal K+ concentrations, that is also more readily available to 3-OMFP.
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