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  • Clonal variation  (1)
  • DNA divergence  (1)
  • Wiley-Blackwell  (2)
  • American Chemical Society (ACS)
  • American Institute of Physics (AIP)
  • Oxford University Press
  • 1990-1994  (2)
  • 1955-1959
Collection
Publisher
  • Wiley-Blackwell  (2)
  • American Chemical Society (ACS)
  • American Institute of Physics (AIP)
  • Oxford University Press
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  • 1990-1994  (2)
  • 1955-1959
Year
  • 1
    ISSN: 0749-503X
    Keywords: Transformation ; recombination ; DNA divergence ; DNA breaks ; rad52, radl ; DNA repeats ; Life and Medical Sciences ; Genetics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology
    Notes: Rearrangements within plasmid DNA are commonly observed during transformation of eukaryotic cells. One possible cause of rearrangements may be recombination between repeated sequences induced by some lesions in the plasmid. We have examined the mechanisms of transformation-associated recombination in the yeast Saccharomyces cerevisiae using a plasmid system which allowed the effects of physical state and/or extent of homology on recombination to be studied. The plasmids contain homologous or diverged (19%) repeats of the URA3 genes (from S. cerevisiae or S. carlsbergensis) separated by the genetically detectable ADE2 colour marker. Recombination during transformation for covalently closed circular plasmids was over 100-fold more frequent than during mitotic growth. The frequency of recombination is partly dependent on the method of transformation in that procedures involving lithium acetate or spheroplasting yield higher frequencies than electroporation. When present in the repeats, unique single-strand breaks that are ligatable, as well as double-strand breaks, lead to high levels of recombination between diverged and identical repeats. The transformation-associated recombination between repeat DNAs is under the influence of the RAD52 and RAD1 genes.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Chichester [u.a.] : Wiley-Blackwell
    Developmental Genetics 12 (1991), S. 393-402 
    ISSN: 0192-253X
    Keywords: Clonal variation ; gene expression ; DNAase I hypersensitive sites ; matrix-associated regions ; Life and Medical Sciences ; Genetics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology
    Notes: The chinchilla-mottled (cm) mutation at the mouse tyrosinase-encoding locus leads to a transversely striped pattern of dark- and light-grey coat colors in homozygotes. The same basic pattern occurs in various other genotypes and has previously been found to represent the clonal developmental history of melanocytes. In a homozygote such as cm/cm, cis-acting mechanisms would be expected to account for the color differences. To search for these mechanisms, the genomic structure of the mutation was examined and compared with the wild-type, and its function was compared in cultured melanocyte clones of the respective colors. Evidence from restriction mapping indicated that the coding region of the mutant gene resembles that of the fully and uniformly pigmented wild-type. However, the upstream sequences are rearranged in the mutation. The rearrangement begins 5 kb 5′ of the transcription initiation site and is estimated to encompass at least 30 kb of distal upstream sequence. At least two stable functional states of the cm gene were detectable: Light-cell clones have low levels of tyrosinase-specific transcription, reduced DNAase I sensitivity of tyrosinase chromatin, and no detectable hypersensitive sites near the gene; dark-cell clones have higher (but subnormal) levels of transcription, greater sensitivity of chromatin to DNAase I, and a hypersensitive site in the promoter region. The changed relation between the structural gene and its upstream region may separate it from cis-acting control elements, resulting in reduced and variable ability to achieve the appropriate chromatin configuration near the time of melanocyte determination; differences in expression among clonal initiator cells are then mitotically perpetuated. © 1992 Wiley-Liss, Inc.
    Additional Material: 10 Ill.
    Type of Medium: Electronic Resource
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