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  • Chemistry  (15)
  • SPACECRAFT PROPULSION AND POWER
  • Surface physics, nanoscale physics, low-dimensional systems
  • 1995-1999  (14)
  • 1970-1974  (1)
  • 1
    ISSN: 0887-624X
    Keywords: unnatural amino acids ; 5,5,5-trifluoroleucine ; azetidine-2-carboxylic acid ; thiazolidine-4-carboxylic acid ; mono-fluorophenylalanine (o,m,p) ; thienylalanine ; cellfree protein synthesis ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The ability to incorporate unnatural amino acids into biologically synthesized proteins will greatly extend the impact of protein engineering on polymer materials science. The present report describes the use of a rapid cell-free assay to assess the incorporation potential of unnatural amino acids in Escherichia coli. The assay features a coupled transcription-translation system (‘Zubay system’) to screen incorporation of amino acid analogs into plasmid-encoded proteins. Activity estimates are based on the ability of an analog to compete with a radiolabeled natural amino acid, and toxicity effects are screened by monitoring incorporation of a second, unrelated amino acid. The assay was established with analogs known to be active in vivo, using a common bacterial expression vector as template DNA. Positive results were obtained with the leucine analog 5,5,5-trifluoroleucine, the proline analogs azetidine-2-carboxylic acid and thiazolidine-4-carboxylic acid, and three isomers of mono-fluorophenylalanine (o,m,p). No activity was observed for the phenylalanine analogs 2-thienylalanine and 3-thienylalanine. The results suggest that the cell-free assay will be a useful predictor of in vivo incorporation and a useful tool in the design and synthesis of genetically engineered materials. © 1995 John Wiley & Sons, Inc.
    Additional Material: 6 Ill.
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  • 2
    Electronic Resource
    Electronic Resource
    Bognor Regis [u.a.] : Wiley-Blackwell
    Journal of Polymer Science Part A: Polymer Chemistry 34 (1996), S. 2817-2824 
    ISSN: 0887-624X
    Keywords: visible light photopolymerization ; tetraorganylborates ; fluorone dyes ; acrylic monomers ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Several new tetraorganylborate salts have been synthesized and tested as coinitiators with 2,4-diiodo-6-butoxy-3-fluorone (DIBF) for the photopolymerization of acrylic monomer mixtures. The rate of photopolymerization has been found to be a function of chemical structure of the borates. Stability, solubility, and reactivity of these borates as coinitiators for photopolymerization have been investigated. Diphenyldialkylborates have been found to be the best among the tested coinitiators. © 1996 John Wiley & Sons, Inc.
    Additional Material: 5 Ill.
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  • 3
    Electronic Resource
    Electronic Resource
    Bognor Regis [u.a.] : Wiley-Blackwell
    Journal of Polymer Science Part A: Polymer Chemistry 36 (1998), S. 1667-1677 
    ISSN: 0887-624X
    Keywords: photoinitiator ; iodonium borate salts ; photoinduced radical polymerization ; fluorone dye ; visible polymerization ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Iodonium butyltriphenylborate salts (A—I+—Ar′Ph3B-—R), (=Bu) were found to be more efficient than iodonium tetraphenylborate salts (R=Ph) when used as photoinitiators for the polymerization of acrylates. Relative photodecomposition rates were also different. It was found from a study of the photoreaction of iodonium borate salts with a model monomer, methyl methacrylate, that iodonium butyltriphenylborate salts simultaneously produce a butyl radical from the borate anion and an aryl radical from the iodonium cation upon irradiation. Both radicals initiate polymerization. Iodonium tetraphenylborate salts were found to release an aryl radical, but only from the iodonium cation. Iodonium borate salts exhibit strong absorption below 300 nm with a tail absorption above 400 nm. Thus, iodonium butyltriphenyl borate salts are efficient photoinitiators even when used with visible light. When a photosensitizer such as 5,7-diiodo-3-butoxy-6-fluorone is employed, iodonium butyltriphenylborate salts are rendered much more efficient for visible light photopolymerization. © 1998 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 36: 1667-1677, 1998
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  • 4
    Electronic Resource
    Electronic Resource
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 42 (1996), S. 3055-3062 
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: The inverse probability theorem of Bayes is used, along with sampling theory, to obtain objective criteria for choosing among rival models. Formulas are given for the relative posterior probabilities of candidate models and for their goodness of fit, when the models are fitted to a common data set with Normally distributed errors. Cases of full, partial and minimal variance information are treated. The formulas are demonstrated with three examples, including a kinetic study of a catalytic reaction.
    Additional Material: 5 Tab.
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  • 5
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Particle and Particle Systems Characterization 12 (1995), S. 309-313 
    ISSN: 0934-0866
    Keywords: Chemistry ; Industrial Chemistry and Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Process Engineering, Biotechnology, Nutrition Technology
    Notes: In-process measurement of particle size and concentration distributions provides continuous analysis, quality control, and optimization of product yield. As process production rates continue to improve, the delay between laboratory analysis and process correction of the product stream becomes more significant and costly in many commercial applications. Elimination of sample handling and operator manipulation is now possible for most pneumatic flows using optical methods which are properly interfaced with the process stream. Insitec has developed such an instrument based on ensemble laser-diffraction that has been successfully applied to a wide range of research and industrial process applications.As part of the adaptation of instrumentation to the specific needs of different process applications, we have developed several different interface arrangements, including a direct inline system and an eductor bypass instrument. A specific window purge design has been developed and shown to operate for extended time periods (exceeding one month and more) without maintenance. To address the wide range of operating concentrations that occur in practice, a variable pathlength interface has been developed along with a deconvolution algorithm that corrects multiple scattering effects for light transmissions down to 20%. Distribution update rates are computed and displayed in less than 5 seconds. This methodology is described along with measurements in a non-steady pharmaceutical powder processing application. Results show uniform size measurement for ten-fold concentration variations. Real time measurements allowed diagnosis and correction of non-steady feed rates to a classifier-mill.
    Additional Material: 7 Ill.
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  • 6
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 1 (1995), S. 449-453 
    ISSN: 0947-6539
    Keywords: computer chemistry ; databases indexing ; reaction organization ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A logical system is presented to describe organic reactions. It is based on the net structural change in a reaction, rather than on substructure searching. This system rigorously provides a place for any reaction. It is very simple to use by hand, but, since it is also numerical, it provides a basis for organizing and retrieving reactions in a database by computer. The effectiveness of a program, COGNOS, written to implement and test the system on a large database, lends confidence in this logic for organizing reactions.
    Additional Material: 2 Ill.
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  • 7
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 65 (1997), S. 477-486 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A multigrid method for numerically solving electrostatics and quantum chemical problems in real space is discussed. Multigrid techniques are used to solve both the linear Poisson equation and the nonlinear Kohn-Sham and Poisson-Boltzmann equations. The electrostatic potential, Laplacian, charge densities (electrons and nuclei), Kohn-Sham DFT orbitals, and the self-consistent field potential are all represented discretely on the Cartesian grid. High-order finite differences are utilized to obtain physically reasonable results on modestly sized grids. The method is summarized and numerical results for all-electron atomic and molecular structure are presented. The strengths and weaknesses of the method are discussed with suggested directions for future developments, including a new high-order conservative differencing scheme for accurate composite grid computations which preserves the linear scaling property of the multigrid method.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 477-486, 1997
    Additional Material: 3 Ill.
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  • 8
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Biopolymers 13 (1974), S. 1317-1340 
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The polymerization kinetics and optical rotatory properties of AnBm polypeptides have been studied, where A = D,L-Tyr, D,L-TyrZ, D,L-LysZ, L-AspOBzl, or L-Asp-ONBzl, and B = D,L-GluOR (R = Me or Bzl). In most cases where An and Bm prefer the same helix sense, the polymerization of A N-carboxyanhydride (initiated by Bm in dioxane) shows first order kinetics and produces a monotonic change in optical rotation, while if opposite helix senses are preferred, the kinetics are multiphasic and the change in rotation reverses direction after the addition of several residues. The rotation change in the latter case is interpreted to mean that the helix in the A block is initially induced to take the nonpreferred sense, as originally suggested by Doty and Lundberg from similar observations on (D-GluOBzl)n-(L-GluOBzl)m. It is found here that the CD spectra for the latter polymer show the sign changes required by this hypothesis. The optical rotation curves and CD spectra for (D,L-Tyr)n-(L-GluOBzl)20 suggest, by analogy, that (L-Tyr)n prefers the same helix sense as (L-GluOBzl)n. However, it is found that the opposite conclusion is equally consistent with the data if one considers the effects of possible changes in side-chain conformation on these data in accordance with the calculated CD spectra of Chen and Woody. The optical rotation curves for (D-GluOBzl)n-(L-GluOBzl)20, (D-Tyr)n-(L-GluOBzl)20, and (L-Tyr)n-(L-GluOBzl)20 are all found to be consistent with a two-state equilibrium model in which the A block initially takes on an induced conformation and has an increasing tendency to revert to its preferred conformation as n increases. It is concluded that in both D-Tyr and L-Tyr the side-chain and/or the backbone conformation is induced by the neighboring L-GluOBzl block, and the data do not distinguish which type of change is occurring. These results are discussed in connection with other observations bearing on the helix sense of (L-Tyr)n.
    Additional Material: 9 Ill.
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  • 9
    ISSN: 0006-3525
    Keywords: dynamic nmr refinement ; MD with time-averaged restraints ; PDQPRO ; quadratic programming algorithm ; TΨC-loop, tRNA ; tRNA (m5U54)-methyltransferase ; RNA/protein recognition ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Solution structures are typically average structures determined with the help of nmr-derived distance and torsion angle information. However, when a biomolecule populates significantly different conformations, the average structure might be prone to artifacts, and other refinement strategies are necessary. For example, when experimental restraints are used in molecular dynamics simulations in a time-averaged fashion (MDtar), the experimental structural information does no longer need to be satisfied at each step of the simulation; instead, the whole trajectory must agree with the restraints. However, the resulting structural ensembles are large and not unique and it is not trivial to extract the essential dynamic features for a system. Here we demonstrate that large MDtar ensembles can be simplified substantially by reducing the number of members to just a few on the basis of adjusting the individual probabilities of the members with the PDQPRO program [N. B. Ulyanov et al. Biophysical Journal (1995), Vol. 68, p. 13]. This algorithm finds the global minimum for a search function that represents the best match of a given ensemble with the experimental dipolar interproton relaxation rates. We have applied this strategy to a 17-residue RNA hairpin, whose loop exhibited considerable flexibility evident from nmr data. This 17mer is a mimic of the TΨC-loop of tRNA, where nucleotide 54 is usually a ribosylthymidine. The methylation of U54, which is completely buried in transfer ribonucleic acid, is administered by tRNA (m5U54)-methyltransferase (RUMT). Since the 17mer is a good substrate for RUMT, we previously concluded that the flexibility of the 17mer's loop is a key to how RUMT gains access to the methylation site [L. J. Yao et al. Journal of Biomolecular NMR (1996) Vol. 9, p. 229]. Application of the PDQPRO algorithm to the previously acquired MDtar trajectories allowed us to reduce the number of conformations from several hundred to one major and five or six minor conformations with individual populations from ∼ 5% to ∼ 50% without any deterioration in the match with the experimental data. The major conformation exhibits a continuation of A-form helicity through part of the loop, involving C60 and U59. In this and most other conformations the methylation site in U54 is no longer buried. © 1998 John Wiley & Sons, Inc. Biopoly 46: 329-342, 1998
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  • 10
    ISSN: 0006-3592
    Keywords: C10-deacetylase ; baccatin III ; 10Deacetylbaccatin III ; Nocardioides Iuteus ; fermentation ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: 10-Deacetylabaccatin III (10 DAB), an important precursor for paclitaxel semisynthesis, is enhanced in yew extracts using C10-deacetylase and C13-deacylase enzymes.4 C10-deacetylase is an intracellular enzyme produced by the fermentation of a soil microorganism, Nocardioides luteus (SC 13912). During the fermentation of Nocardioides luteus, the growth of cells reaches a maximum growth at 28 h. C10-deacetylase enzyme activity starts at 26 h and peaks at 38 h of the fermentation. The cells are recovered by centrifugation. The C10-deacetylase enzyme was purified from the Nocardioides luteus cells. The enzyme was purified 190-fold to near homogeneity. The purified enzyme appeared as a single band on 12.5% SDS-PAGE analysis with a molecular weight of 40,000 daltons. © 1995 John Wiley & Sons, Inc.
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