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  • MATERIALS PROCESSING  (18)
  • Biochemistry and Biotechnology  (15)
  • Chemical Engineering  (5)
  • 1995-1999  (7)
  • 1985-1989  (31)
  • 1
    Electronic Resource
    Electronic Resource
    Physical mechanisms of cell damage in microcarrier cell culture bioreactors (1988)
    New York, NY [u.a.] : Wiley-Blackwell
    Biotechnology and Bioengineering 32 (1988), S. 1001-1014 
    Details
    ISSN: 0006-3592
    Keywords: Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: The negative effects of excessive agitation on tissue cells in microcarrier culture have often been ascribed to “shear.” Analysis of the fluid mechanics occurring suggests that there are actually three potential damage mechanisms: collisions of a cell-covered microcarrier with other beads, collisions with parts of the reactor (primarily the impeller), and interaction with turbulent eddies the size of the microcarrier beads. Review of the available quantitative information on agitation effects in cell cultures does not establish which mechanism is predominant; the range of experimental variables reported emphasizes power input over the other reactor and impeller parameters. The bead-bead collision model is tentatively supported by the available data, but the other mechanisms may still be significant in some systems. The formation of bead aggregates by cellular bridging provides a parallel means of damaging cells. Breaking of these bridges by any of the three means identified earlier can cause cell destruction and/or the net transfer of cells to formerly bare beads. High concentrations of bridges are favored by lower agitation rates, presumably because the bridges are not as quickly destroyed after formation.
    Additional Material: 14 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/bit.260320808
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  • 2
    Electronic Resource
    Electronic Resource
    Diffusion and solid dissolution/precipitation in permeable media (1989)
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 35 (1989), S. 1057-1072 
    Details
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: We have developed an analytical solution which describes mineral zonation caused by diffusion in permeable media. For a semiinfinite domain, the species conservation equations transform into ordinary differential equations that yield a closed-form solution. The solution exhibits shock dissolution/precipitation fronts and gradual (nonshock) precipitation fronts. The solution can exhibit regions (gaps) containing no reactive solids which separate moving dissolution and precipitation fronts. The analysis is, in principle, extendable to include intraaqueous reactions, although the mathematics quickly becomes intractable.Numerical simulation exhibits all of the features of the more restricted analytical solution and is in good agreement with the data on hydroxyapatite dissolution taken by Kim and Cussler (1987).
    Additional Material: 13 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/aic.690350702
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  • 3
    Electronic Resource
    Electronic Resource
    Modeling of contact-inhibited animal cell growth on flat surfaces and spheres (1989)
    New York, NY [u.a.] : Wiley-Blackwell
    Biotechnology and Bioengineering 33 (1989), S. 300-305 
    Details
    ISSN: 0006-3592
    Keywords: Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: A model of contact-inhibited growth of cells on flat and spherical surfaces is presented. It shows that contact inhibition does not significantly affect the calculated growth rate of cells unless they are allowed to multiply a large amount from the original seeding density. Microcarriers seeded at low densities require long times to reach confluence because contact inhibition becomes important. In systems with both growth and separate cell death, the equilibrium fraction of holes in the confluent monolayer is below 8% if the death rate is less than half the growth rate, but increases rapidly as the death rate increases from that value.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/bit.260330308
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  • 4
    Electronic Resource
    Electronic Resource
    Molecular thermodynamics of aqueous two-phase systems for bioseparations (1988)
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 34 (1988), S. 1585-1594 
    Details
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Aqueous polymer-polymer two-phase systems provide a powerful method for separating biomolecules by extraction. When a complex mixture of biomolecules (e.g., a fermentation broth or a solution of lysed cells) is added to such a system, biomolecules partition uniquely between the two phases, achieving separation.A thermodynamic framework is presented for optimizing extraction performance in biological separations. First, a molecular-thermodynamic model, based on the osmotic virial equation, is proposed to describe phase equilibria for dilute aqueous mixtures containing polymers and protein. Second, experimental phase-equilibrium data (protein partition coefficients) are reported for a number of model proteins including albumin, lysozyme, and α-chymotrypsin. To interpret and correlate the experimental data, Low-Angle Laser-Light Scattering (LALLS) measurements were made to determine osmotic second virial coefficients for aqueous mixtures containing polymers, proteins, salts (KCl, KH2PO4 and K2SO4 at concentrations of 50 and 100 mM) and several combinations of polymer-polymer and polymer-protein pairs. Combined with electrochemical measurements (differences in potential between the two phases and protein net charge), these data provide parameters for the model to calculate the desired phase equilibria. A comparison of calculated and experimental results indicates that the virial-equation model provides good prediction of binodals and a reliable basis for estimating infinite-dilution protein partition coefficients for biotechnical process design.
    Additional Material: 10 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/aic.690341002
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  • 5
    Electronic Resource
    Electronic Resource
    Rule-based mineral sequences in geochemical flow processes (1988)
    Hoboken, NJ : Wiley-Blackwell
    AIChE Journal 34 (1988), S. 1607-1614 
    Details
    ISSN: 0001-1541
    Keywords: Chemistry ; Chemical Engineering
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: The infiltration of an aqueous solution into a permeable medium generally results in the dissolution of some of the minerals initially present and the possible precipitation of others. When the infiltration velocities are small, as is the case for many natural processes, conditions of local equilibrium apply and the dissolution and precipitation processes exhibit a wave-type behavior reminiscent of chromatogrphic fronts. Zones of constant composition (state) will be separated by narrow regions within which the aqueous and solid phase concentrations exhibit sharp changes. Because of this wave-like structure, an algebraic solution of the coupled material balance equations exists, but in a form that involves a trial and error solution procedure which has heretofore discouraged its application. This paper describes the essence of a scheme which uses a combination of graph theory and heuristics to minimize trials and thereby render the algebraic solution practical. The scheme offers an alternative to time-sequencing solutions (e.g., finite difference) of the set of partial differential equations.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/aic.690341004
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  • 6
    Electronic Resource
    Electronic Resource
    Lactam bridge stabilization of α-helical peptides: Ring size, orientation and positional effects (1995)
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Peptide Science 1 (1995), S. 274-282 
    Details
    ISSN: 1075-2617
    Keywords: Lactam bridges ; α-helical stability ; cyclization ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A series of 14 residue amphipathic α-helical peptides, in which the sidechains of glutamic acid and lysine have been covalently joined, was synthesized in order to determine the effect of spacing, position and orientation of these lactam bridges. It was found that although an (i, i+3) spacing would position the lactam bridge on the same face of the helix, these lactams with 18-member rings were actually helix-destabilizing regardless of position or location. On the other hand, (i, i+4) lactams with 21-member rings were helix-stabilizing but this was dependent on orientation. Glutamic acid-lysine lactams increased the helical content of the peptide when compared with their linear homologue in benign conditions (50 mM KH2PO4, 100 mM KCl, pH 7). Two Glu-Lys (i, i+4) lactams located at the N- and C-termini gave rise to a peptide with greater than 99% helical content in benign conditions. Peptides with Lys-Glu oriented lactams were random structures in benign conditions but in the presence of 50% TFE could be induced into a helical conformation. The stability of the single-stranded α-helices, as measured by thermal denaturations in 25% TFE indicated that Glu-Lys oriented lactam bridges stabilized the helical conformation relative to the linear unbridged peptide. One Glu-Lys lactam in the middle of the peptide was more effective at stabilizing helical structure than two Glu-Lys lactams positioned one at each end of the molecule. The lactams with the Lys-Glu orientation were destabilizing relative to the unbridged peptide. This study demonstrates that correct orientation and position of a lactam bridge is critical in order to design peptides with high helical content in aqueous media.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/psc.310010408
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  • 7
    Electronic Resource
    Electronic Resource
    Positional dependence of the effects of negatively charged Glu side chains on the stability of two-stranded α-helical coiled-coils (1997)
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Peptide Science 3 (1997), S. 209-223 
    Details
    ISSN: 1075-2617
    Keywords: α-helices ; coiled-coil ; helix-dipole ; protein stability ; electrostatic interactions ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The effects on protein stability of negatively charged Glu side chains at different positions along the length of the α-helix were investigated in the two-stranded α-helical coiled-coil. A native coiled-coil has been designed which consists of two identical 35 residue polypeptide chains with a heptad repeat QgVaGbAcLdQeKf and a Cys residue at position 2 to allow the formation of an interchain 2-2′ disulphide bridge. This coiled-coil contains no intra- or interchain electrostatic interactions and served as a control for peptides in which Glu was substituted for Gln in the e or g heptad positions. The effect of the substitutions on stability was determined by urea denaturation at 20°C with the degree of unfolding monitored by circular dichroism spectroscopy. A Glu substituted for Gln near the N-terminus in each chain of the coiled-coil stabilizes the coiled-coil at pH 7, consistent with the charge-helix dipole interaction model. This stability increase is modulated by pH change and the addition of salt (KCl or guanidine hydrochloride), confirming the electrostatic nature of the effect. In contrast, Glu substitution in the middle of the helix destabilizes the coiled-coil because of the lower helical propensity and hydrophobicity of Glu compared with Gln at pH 7. Taking the intrinsic differences into account, the apparent charge-helix dipole interaction at the N-terminus is approximately 0.35 kcal/mol per Glu substitution. A Glu substitution at the C-terminus destabilizes the coiled-coil more than in the middle owing to the combined effects of intrinsic destabilization and unfavourable charge-helix dipole interaction with the negative pole of the helix dipole. The estimated destabilizing charge-helix dipole interaction of 0.08 kcal/mol is smaller than the stabilizing interaction at the N-terminus. The presence of a 2-2′disulphide bridge appears to have little influence on the magnitude of the charge-helix dipole interactions at either end of the coiled-coil. © 1997 European Peptide Society and John Wiley & Sons, Ltd.
    Additional Material: 4 Ill.
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  • 8
    Electronic Resource
    Electronic Resource
    Shift from growth to nutrient-limited maintenance kinetics during biofilter acclimation (1997)
    New York, NY [u.a.] : Wiley-Blackwell
    Biotechnology and Bioengineering 56 (1997), S. 330-339 
    Details
    ISSN: 0006-3592
    Keywords: biofilter ; kinetics ; maintenance metabolism ; acclimation ; biomass ; nutrient limitation ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: During long-term operation of a biofilter, the mandatory absence of net cell growth forces the cells into maintenance metabolism, which is of relatively low rate compared to substrate consumption during the active growth of the acclimation phase. A model based on this shift in metabolism can explain the postacclimation decrease in activity sometimes reported for biofilters. The cessation of growth can be caused by nutrient depletion in the bed. Postacclimation nutrient addition increases activity primarily by allowing a return to the high substrate consumption rate of active growth, and only secondarily helps raise bed activity because of the ultimately higher amount of biomass in the bed. Simulations incorporating the acclimation period and the role of maintenance metabolism predict about 4 logarithms of growth during acclimation of a hexane biofilter, which was confirmed experimentally. Changes in a biofilter's biomass during the acclimation phase can be estimated from substrate conversion data using two approximate methods. The first follows the cumulative amount of substrate converted and uses the estimated yield of cells from substrate during active growth to estimate the total biomass created. The second method follows a rate constant for conversion of substrate in the bed. © 1997 John Wiley & Sons, Inc. Biotechnol Bioeng 56: 330-339, 1997.
    Additional Material: 6 Ill.
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  • 9
    Electronic Resource
    Electronic Resource
    Relationship of sidechain hydrophobicity and α-helical propensity on the stability of the single-stranded amphipathic α-helix (1995)
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Peptide Science 1 (1995), S. 319-329 
    Details
    ISSN: 1075-2617
    Keywords: -α-helix ; α-helical propensity ; hydrophobicity ; HPLC ; thermal stability ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The aim of the present investigation is to determine the effect of α-helical propensity and sidechain hydrophobicity on the stability of amphipathic α-helices. Accordingly, a series of 18-residue amphipathic α-helical peptides has been synthesized as a model system where all 20 amino acid residues were substituted on the hydrophobic face of the amphipathic α-helix. In these experiments, all three parameters (sidechain hydrophobicity, α-helical propensity and helix stability) were measured on the same set of peptide analogues. For these peptide analogues that differ by only one amino acid residue, there was a 0.96 kcal/mole difference in α-helical propensity between the most (Ala) and the least (Gly) α-helical analogue, a 12.1-minute difference between the most (Phe) and the least (Asp) retentive analogue on the reversed-phase column, and a 32.3°C difference in melting temperatures between the most (Leu) and the least (Asp) stable analogue. The results show that the hydrophobicity and α-helical propensity of an amino acid sidechain are not correlated with each other, but each contributes to the stability of the amphipathic α-helix. More importantly, the combined effects of α-helical propensity and sidechain hydrophobicity at a ratio of about 2:1 had optimal correlation with α-helix stability. These results suggest that both α-helical propensity and sidechain hydrophobicity should be taken into consideration in the design of α-helical proteins with the desired stability.
    Additional Material: 8 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/psc.310010507
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  • 10
    Electronic Resource
    Electronic Resource
    A system for automated DNA electrophoresis, molecular hybridization and electronic detection: I Electrophoresis and hybridization (1987)
    Weinheim : Wiley-Blackwell
    Electrophoresis 8 (1987), S. 255-261 
    Details
    ISSN: 0173-0835
    Keywords: Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: We have designed and constructed a computer-controlled, fully automated system for Southern-type nucleic acid hybridization analysis. Restriction enzyme digests of DNA are placed into sample wells of the gel contained on a nine-fingered plastic frame. The 32-labeled probe is loaded into the hybridization chamber. Instructions for all the subsequent steps in the fully automated process are specified by the operator's answers to questions which appear on the computer screen at the start of the experiment. The system performs horizontal submarine electrophoresis. An adjustable endpoint detector concludes electrophoresis. Automatic voltage/temperature feedback control maintains maximum allowable voltage while keeping the temperature constant. Following electrophoresis a robot arm moves the gel frame from station to station. The system then affixes the separated fragments to a solid phase matrix, denatures, neutralizes, hybridizes, washes, dries and detects the 32 P according to the specifications preprogrammed by the operator. The results, printed out by the computer, give a plot of radioactivity versus distance from the origin for each of the nine simultaneous hybridizations.
    Additional Material: 11 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/elps.1150080602
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