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1

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Simplified method for including spatial correlations in mean-field approximations (2013)

Deborah C. Markham, Matthew J. Simpson, and Ruth E. Baker

American Physical Society (APS)

In: Physical Review E

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Publikationsdatum: 2013-06-11

Beschreibung: Author(s): Deborah C. Markham, Matthew J. Simpson, and Ruth E. Baker Biological systems involving proliferation, migration, and death are observed across all scales. For example, they govern cellular processes such as wound healing, as well as the population dynamics of groups of organisms. In this paper, we provide a simplified method for correcting mean-field appro... [Phys. Rev. E 87, 062702] Published Mon Jun 10, 2013

Schlagwort(e): Biological Physics

Print ISSN: 1539-3755

Digitale ISSN: 1550-2376

Thema: Physik

Publiziert von American Physical Society (APS)

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2

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Compression of Positron Clouds in the Independent Particle Regime (2011)

C. A. Isaac, C. J. Baker, T. Mortensen, D. P. van der Werf, and M. Charlton

American Physical Society (APS)

In: Physical Review Letters

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Publikationsdatum: 2011-07-13

Beschreibung: Author(s): C. A. Isaac, C. J. Baker, T. Mortensen, D. P. van der Werf, and M. Charlton The application of an asymmetric dipolar electric field rotating at a frequency close to that of the axial bounce of a collection of trapped positrons has, in the presence of a low pressure molecular gas to provide cooling, been used to achieve compression of the cloud. A theory of this effect has b... [Phys. Rev. Lett. 107, 033201] Published Tue Jul 12, 2011

Schlagwort(e): Atomic, Molecular, and Optical Physics

Print ISSN: 0031-9007

Digitale ISSN: 1079-7114

Thema: Physik

Publiziert von American Physical Society (APS)

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Publisher’s Note: Inferring Where and When Replication Initiates from Genome-Wide Replication Timing Data [Phys. Rev. Lett. 108, 268101 (2012)] (2012)

A. Baker, B. Audit, S. C.-H. Yang (楊正炘), J. Bechhoefer, and A. Arneodo

American Physical Society (APS)

In: Physical Review Letters

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Publikationsdatum: 2012-07-17

Beschreibung: Author(s): A. Baker, B. Audit, S. C.-H. Yang (楊正炘), J. Bechhoefer, and A. Arneodo [Phys. Rev. Lett. 109, 039901] Published Mon Jul 16, 2012

Schlagwort(e): Errata

Print ISSN: 0031-9007

Digitale ISSN: 1079-7114

Thema: Physik

Publiziert von American Physical Society (APS)

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4

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Atomistic predictions of dislocation nucleation with transition state theory (2011)

L. D. Nguyen, K. L. Baker, and D. H. Warner

American Physical Society (APS)

In: Physical Review B

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Publikationsdatum: 2011-07-19

Beschreibung: Author(s): L. D. Nguyen, K. L. Baker, and D. H. Warner The combined use of atomistic simulations and transition state theory (TST) has enabled significant improvements in the prediction of thermally activated processes in a wide range of applications, e.g., conformation changes in molecules, chemical reactions, kinetic phase transitions, and solid-state... [Phys. Rev. B 84, 024118] Published Mon Jul 18, 2011

Schlagwort(e): Structure, structural phase transitions, mechanical properties, defects

Print ISSN: 1098-0121

Digitale ISSN: 1095-3795

Thema: Physik

Publiziert von American Physical Society (APS)

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5

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Magnetoelastic coupling in bulk and nanoscale MnO (2011)

Q.-C. Sun, S. N. Baker, A. D. Christianson, and J. L. Musfeldt

American Physical Society (APS)

In: Physical Review B

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Publikationsdatum: 2011-07-06

Beschreibung: Author(s): Q.-C. Sun, S. N. Baker, A. D. Christianson, and J. L. Musfeldt Phonons are exquisitely sensitive to finite length scale effects because they are intimately connected to charge, structure, and magnetism, and a quantitative analysis of their behavior can reveal microscopic aspects of spin-lattice interaction. To investigate these effects in a model correlated oxi... [Phys. Rev. B 84, 014301] Published Tue Jul 05, 2011

Schlagwort(e): Dynamics, dynamical systems, lattice effects

Print ISSN: 1098-0121

Digitale ISSN: 1095-3795

Thema: Physik

Publiziert von American Physical Society (APS)

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6

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Application of the wavelet transform to nanoscale thermal transport (2012)

Christopher H. Baker, Donald A. Jordan, and Pamela M. Norris

American Physical Society (APS)

In: Physical Review B

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Publikationsdatum: 2012-09-21

Beschreibung: Author(s): Christopher H. Baker, Donald A. Jordan, and Pamela M. Norris The continuous wavelet transform is employed to analyze the dynamics and time-dependent energy distribution of phonon wave-packet propagation and scattering in molecular dynamics simulations. The equations of the one-dimensional continuous wavelet transform are presented and then discretized for imp... [Phys. Rev. B 86, 104306] Published Thu Sep 20, 2012

Schlagwort(e): Dynamics, dynamical systems, lattice effects

Print ISSN: 1098-0121

Digitale ISSN: 1095-3795

Thema: Physik

Publiziert von American Physical Society (APS)

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7

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Noise-induced temporal dynamics in Turing systems (2013)

Linus J. Schumacher, Thomas E. Woolley, and Ruth E. Baker

American Physical Society (APS)

In: Physical Review E

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Publikationsdatum: 2013-04-26

Beschreibung: Author(s): Linus J. Schumacher, Thomas E. Woolley, and Ruth E. Baker We examine the ability of intrinsic noise to produce complex temporal dynamics in Turing pattern formation systems, with particular emphasis on the Schnakenberg kinetics. Using power spectral methods, we characterize the behavior of the system using stochastic simulations at a wide range of points i... [Phys. Rev. E 87, 042719] Published Thu Apr 25, 2013

Schlagwort(e): Biological Physics

Print ISSN: 1539-3755

Digitale ISSN: 1550-2376

Thema: Physik

Publiziert von American Physical Society (APS)

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8

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Incorporating spatial correlations into multispecies mean-field models (2013)

Deborah C. Markham, Matthew J. Simpson, Philip K. Maini, Eamonn A. Gaffney, and Ruth E. Baker

American Physical Society (APS)

In: Physical Review E

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Publikationsdatum: 2013-11-21

Beschreibung: Author(s): Deborah C. Markham, Matthew J. Simpson, Philip K. Maini, Eamonn A. Gaffney, and Ruth E. Baker In biology, we frequently observe different species existing within the same environment. For example, there are many cell types in a tumour, or different animal species may occupy a given habitat. In modeling interactions between such species, we often make use of the mean-field approximation, wher... [Phys. Rev. E 88, 052713] Published Wed Nov 20, 2013

Schlagwort(e): Biological Physics

Print ISSN: 1539-3755

Digitale ISSN: 1550-2376

Thema: Physik

Publiziert von American Physical Society (APS)

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9

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Importance of the Voronoi domain partition for position-jump reaction-diffusion processes on nonuniform rectilinear lattices (2013)

Christian A. Yates and Ruth E. Baker

American Physical Society (APS)

In: Physical Review E

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Publikationsdatum: 2013-11-23

Beschreibung: Author(s): Christian A. Yates and Ruth E. Baker Position-jump processes are used for the mathematical modeling of spatially extended chemical and biological systems with increasing frequency. A large subset of the literature concerning such processes is concerned with modeling the effect of stochasticity on reaction-diffusion systems. Traditional... [Phys. Rev. E 88, 054701] Published Fri Nov 22, 2013

Schlagwort(e): Biological Physics

Print ISSN: 1539-3755

Digitale ISSN: 1550-2376

Thema: Physik

Publiziert von American Physical Society (APS)

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10

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Isotropic model for cluster growth on a regular lattice (2013)

Christian A. Yates and Ruth E. Baker

American Physical Society (APS)

In: Physical Review E

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Publikationsdatum: 2013-08-17

Beschreibung: Author(s): Christian A. Yates and Ruth E. Baker There exists a plethora of mathematical models for cluster growth and/or aggregation on regular lattices. Almost all suffer from inherent anisotropy caused by the regular lattice upon which they are grown. We analyze the little-known model for stochastic cluster growth on a regular lattice first int... [Phys. Rev. E 88, 023304] Published Fri Aug 16, 2013

Schlagwort(e): Computational Physics

Print ISSN: 1539-3755

Digitale ISSN: 1550-2376

Thema: Physik

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