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  • American Geophysical Union  (235)
  • Oxford University Press  (228)
  • American Physical Society  (123)
  • BioMed Central  (115)
  • 2010-2014  (698)
  • 1940-1944  (3)
  • 1
    Publication Date: 2011-08-27
    Description: SUMMARY A computer synthetic seismicity program for the Wellington region has been implemented and used to infer the effect of the 1848 Awatere and 1855 Wairarapa mega-earthquakes on the timing of the next characteristic (magnitude 7.35 or more) earthquake on the Wellington–Hutt Valley section of the Wellington Fault. We find that, on average over several hundred cases, a Wellington Fault event is delayed by 259 years. The synthetic catalogue of 500 000 events, magnitude 5.5 or more, also gives the average recurrence time of characteristic Wellington Fault events (960 yr) and their Coefficient of Variation (0.40). There is also a strong retarding effect on moderate magnitude Wellington Fault events, magnitude 6.5–7.3. Sensitivity tests indicate that these results are robust. The synthetic model contains 58 known major faults and 3000 randomly placed small faults to reproduce the rate and spatial distribution of background seismicity observed recently. From the synthetic catalogue it is possible to determine the average recurrence rate for all major faults. Also, there is strong evidence of the short-term (10 yr) temporal clustering of large events throughout the region, a factor that contributes to a highly variable moment release rate over time spans of a few hundred years.
    Print ISSN: 0956-540X
    Electronic ISSN: 1365-246X
    Topics: Geosciences
    Published by Oxford University Press on behalf of The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 2
    Publication Date: 2012-10-11
    Description: Background: The bacterium Caulobacter crescentus is a popular model for the study of cell cycle regulation and senescence. The large prolate siphophage phiCbK has been an important tool in C. crescentus biology, and has been studied in its own right as a model for viral morphogenesis. Although a system of some interest, to date little genomic information is available on phiCbK or its relatives. Results: Five novel phiCbK-like C. crescentus bacteriophages, CcrMagneto, CcrSwift, CcrKarma, CcrRogue and CcrColossus, were isolated from the environment. The genomes of phage phiCbK and these five environmental phage isolates were obtained by 454 pyrosequencing. The phiCbK-like phage genomes range in size from 205 kb encoding 318 proteins (phiCbK) to 280 kb encoding 448 proteins (CcrColossus), and were found to contain nonpermuted terminal redundancies of 10 to 17 kb. A novel method of terminal ligation was developed to map genomic termini, which confirmed termini predicted by coverage analysis. This suggests that sequence coverage discontinuities may be useable as predictors of genomic termini in phage genomes. Genomic modules encoding virion morphogenesis, lysis and DNA replication proteins were identified. The phiCbK-like phages were also found to encode a number of intriguing proteins; all contain a clearly T7-like DNA polymerase, and five of the six encode a possible homolog of the C. crescentus cell cycle regulator GcrA, which may allow the phage to alter the host cell's replicative state. The structural proteome of phage phiCbK was determined, identifying the portal, major and minor capsid proteins, the tail tape measure and possible tail fiber proteins. All six phage genomes are clearly related; phiCbK, CcrMagneto, CcrSwift, CcrKarma and CcrRogue form a group related at the DNA level, while CcrColossus is more diverged but retains significant similarity at the protein level. Conclusions: Due to their lack of any apparent relationship to other described phages, this group is proposed as the founding cohort of a new phage type, the phiCbK-like phages. This work will serve as a foundation for future studies on morphogenesis, infection and phage-host interactions in C. crescentus.
    Electronic ISSN: 1471-2164
    Topics: Biology
    Published by BioMed Central
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  • 3
    Publication Date: 2014-03-09
    Description: We present the results of our quasi-simultaneous radio, submm, infrared, optical and X-ray study of the Galactic black hole candidate X-ray binary MAXI J1836–194 during its 2011 outburst. We consider the full multiwavelength spectral evolution of the outburst, investigating whether the evolution of the jet spectral break (the transition between optically thick and optically thin synchrotron emission) is caused by any specific properties of the accretion flow. Our observations show that the break does not scale with the X-ray luminosity or with the inner radius of the accretion disc, and is instead likely to be set by much more complex processes. We find that the radius of the acceleration zone at the base of the jet decreases from ~10 6 gravitational radii during the hard intermediate state to ~10 3 gravitational radii as the outburst fades (assuming a black hole mass of 8 M ), demonstrating that the electrons are accelerated on much larger scales than the radius of the inner accretion disc and that the jet properties change significantly during outburst. From our broad-band modelling and high-resolution optical spectra, we argue that early in the outburst, the high-energy synchrotron cooling break was located in the optical band, between 3.2 10 14 and 4.5 10 14  Hz. We calculate that the jet has a total radiative power of 3.1 10 36  erg s –1 , which is ~6 per cent of the bolometric radiative luminosity at this time. We discuss how this cooling break may evolve during the outburst, and how that evolution dictates the total jet radiative power. Assuming the source is a stellar mass black hole with canonical state transitions, from the measured flux and peak temperature of the disc component we constrain the source distance to be 4–10 kpc.
    Print ISSN: 0035-8711
    Electronic ISSN: 1365-2966
    Topics: Physics
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  • 4
  • 5
    Publication Date: 2011-08-26
    Print ISSN: 0956-540X
    Electronic ISSN: 1365-246X
    Topics: Geosciences
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  • 6
    Publication Date: 2012-10-10
    Description: Background The bacterium Caulobacter crescentus is a popular model for the study of cell cycle regulation and senescence. The large prolate siphophage phiCbK has been an important tool in C. crescentus biology, and has been studied in its own right as a model for viral morphogenesis. Although a system of some interest, to date little genomic information is available on phiCbK or its relatives. Results Five novel phiCbK-like C. crescentus bacteriophages, CcrMagneto, CcrSwift, CcrKarma, CcrRogue and CcrColossus, were isolated from the environment. The genomes of phage phiCbK and these five environmental phage isolates were obtained by 454 pyrosequencing. The phiCbK-like phage genomes range in size from 205 kb encoding 318 proteins (phiCbK) to 280 kb encoding 448 proteins (CcrColossus), and were found to contain nonpermuted terminal redundancies of 10 to 17 kb. A novel method of terminal ligation was developed to map genomic termini, which confirmed termini predicted by coverage analysis. This suggests that sequence coverage discontinuities may be useable as predictors of genomic termini in phage genomes. Genomic modules encoding virion morphogenesis, lysis and DNA replication proteins were identified. The phiCbK-like phages were also found to encode a number of intriguing proteins; all contain a clearly T7-like DNA polymerase, and five of the six encode a possible homolog of the C. crescentus cell cycle regulator GcrA, which may allow the phage to alter the host cell’s replicative state. The structural proteome of phage phiCbK was determined, identifying the portal, major and minor capsid proteins, the tail tape measure and possible tail fiber proteins. All six phage genomes are clearly related; phiCbK, CcrMagneto, CcrSwift, CcrKarma and CcrRogue form a group related at the DNA level, while CcrColossus is more diverged but retains significant similarity at the protein level. Conclusions Due to their lack of any apparent relationship to other described phages, this group is proposed as the founding cohort of a new phage type, the phiCbK-like phages. This work will serve as a foundation for future studies on morphogenesis, infection and phage-host interactions in C. crescentus.
    Electronic ISSN: 1471-2164
    Topics: Biology
    Published by BioMed Central
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  • 7
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 12 (2011): Q07025, doi:10.1029/2010GC003438.
    Description: The volcanic origin of the Samoan archipelago can be explained by one of three models, specifically, by a hot spot forming over a mantle plume, by lithospheric extension resulting from complex subduction tectonics in the region, or by a combination of these two processes, either acting sequentially or synchronously. In this paper, we present results of 36 high-resolution 40Ar/39Ar incremental heating age analyses for the initial (submarine) phase of Samoan volcanoes, ranging from 13.2 Ma for the westernmost Samoan seamounts to 0.27 Ma in the eastern Samoan volcanic province. Taken as a whole, our new age data point to a hot spot origin for the shield-building volcanism in the Samoan lineament, whereby seamounts younger than 5 Ma are consistent with a model of constant 7.1 cm/yr plate motion, analogous to GPS measurements for the Pacific Plate in this region. This makes our new 40Ar/39Ar ages of the submarine basalts all older compared to recent absolute plate motion (APM) models by Wessel et al. (2008), which are based on the inversion of twelve independent seamount trails in the Pacific relative to a fixed reference frame of hot spots and which predict faster plate motions of around 9.3 cm/yr in the vicinity of Samoa. The Samoan ages are also older than APM models by Steinberger et al. (2004) taking into account the motion of hot spots in the Pacific alone or globally. The age systematics become more complicated toward the younger end of the Samoan seamount trail, where its morphology bifurcates into two en echelon subtracks, termed the VAI and MALU trends, as they emanate from two eruptive centers at Vailulu'u and Malumalu seamount, respectively. Spaced ∼50 km apart, the VAI and MALU trends have distinct geochemical characters and independent but overlapping linear 40Ar/39Ar age progressions since 1.5 Ma. These phenomena are not unique to Samoa, as they have been observed at the Hawaiian hot spot, and can be attributed to a geochemical zoning in its underlying mantle source or plume. Moreover, the processes allowing for the emergence of two distinct eruptive centers in the Samoan archipelago, the stepped offset of these subtracks, and their slight obliqueness with respect to the overall seamount trail orientation may very well be controlled by local tectonics, stresses, and extension, also causing the rejuvenated volcanism on the main islands of Savai'i, Upolu, and Tutuila since 0.4 Ma.
    Description: Financial support is provided by NSF‐OCE 0002875 and NSF‐OCE 0351437.
    Keywords: Ar-40/Ar-39 geochronology ; Seamounts ; Pacific plate ; Hot spots ; Intraplate volcanism ; Zoned mantle plume
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
    Format: text/plain
    Format: application/zip
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  • 8
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2010. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Paleoceanography 25 (2010): PA1102, doi:10.1029/2009PA001871.
    Description: Instrumental data suggest that major shifts in tropical Pacific atmospheric dynamics and hydrology have occurred within the past century, potentially in response to anthropogenic warming. To better understand these trends, we use the hydrogen isotopic ratios of terrestrial higher plant leaf waxes (δDwax) in marine sediments from southwest Sulawesi, Indonesia, to compile a detailed reconstruction of central Indo-Pacific Warm Pool (IPWP) hydrologic variability spanning most of the last two millennia. Our paleodata are highly correlated with a monsoon reconstruction from Southeast Asia, indicating that intervals of strong East Asian summer monsoon (EASM) activity are associated with a weaker Indonesian monsoon (IM). Furthermore, the centennial-scale oscillations in our data follow known changes in Northern Hemisphere climate (e.g., the Little Ice Age and Medieval Warm Period) implying a dynamic link between Northern Hemisphere temperatures and IPWP hydrology. The inverse relationship between the EASM and IM suggests that migrations of the Intertropical Convergence Zone and associated changes in monsoon strength caused synoptic hydrologic shifts in the IPWP throughout most of the past two millennia.
    Description: This research was supported by the U.S. NSF, the Ocean and Climate Change Institute at WHOI, and a National Defense Science and Engineering Graduate Fellowship to J. Tierney.
    Keywords: Tropical Pacific climate ; Compound-specific hydrogen isotopes
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/postscript
    Format: application/pdf
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  • 9
    Publication Date: 1941-11-01
    Print ISSN: 0031-899X
    Electronic ISSN: 1536-6065
    Topics: Physics
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  • 10
    Publication Date: 2013-10-16
    Print ISSN: 1550-7998
    Electronic ISSN: 1550-2368
    Topics: Physics
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