ALBERT

Description: A genome-wide association study (GWAS) of educational attainment was conducted in a discovery sample of 101,069 individuals and a replication sample of 25,490. Three independent single-nucleotide polymorphisms (SNPs) are genome-wide significant (rs9320913, rs11584700, rs4851266), and all three replicate. Estimated effects sizes are small (coefficient of determination R(2) approximately 0.02%), approximately 1 month of schooling per allele. A linear polygenic score from all measured SNPs accounts for approximately 2% of the variance in both educational attainment and cognitive function. Genes in the region of the loci have previously been associated with health, cognitive, and central nervous system phenotypes, and bioinformatics analyses suggest the involvement of the anterior caudate nucleus. These findings provide promising candidate SNPs for follow-up work, and our effect size estimates can anchor power analyses in social-science genetics.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3751588/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3751588/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Rietveld, Cornelius A -- Medland, Sarah E -- Derringer, Jaime -- Yang, Jian -- Esko, Tonu -- Martin, Nicolas W -- Westra, Harm-Jan -- Shakhbazov, Konstantin -- Abdellaoui, Abdel -- Agrawal, Arpana -- Albrecht, Eva -- Alizadeh, Behrooz Z -- Amin, Najaf -- Barnard, John -- Baumeister, Sebastian E -- Benke, Kelly S -- Bielak, Lawrence F -- Boatman, Jeffrey A -- Boyle, Patricia A -- Davies, Gail -- de Leeuw, Christiaan -- Eklund, Niina -- Evans, Daniel S -- Ferhmann, Rudolf -- Fischer, Krista -- Gieger, Christian -- Gjessing, Hakon K -- Hagg, Sara -- Harris, Jennifer R -- Hayward, Caroline -- Holzapfel, Christina -- Ibrahim-Verbaas, Carla A -- Ingelsson, Erik -- Jacobsson, Bo -- Joshi, Peter K -- Jugessur, Astanand -- Kaakinen, Marika -- Kanoni, Stavroula -- Karjalainen, Juha -- Kolcic, Ivana -- Kristiansson, Kati -- Kutalik, Zoltan -- Lahti, Jari -- Lee, Sang H -- Lin, Peng -- Lind, Penelope A -- Liu, Yongmei -- Lohman, Kurt -- Loitfelder, Marisa -- McMahon, George -- Vidal, Pedro Marques -- Meirelles, Osorio -- Milani, Lili -- Myhre, Ronny -- Nuotio, Marja-Liisa -- Oldmeadow, Christopher J -- Petrovic, Katja E -- Peyrot, Wouter J -- Polasek, Ozren -- Quaye, Lydia -- Reinmaa, Eva -- Rice, John P -- Rizzi, Thais S -- Schmidt, Helena -- Schmidt, Reinhold -- Smith, Albert V -- Smith, Jennifer A -- Tanaka, Toshiko -- Terracciano, Antonio -- van der Loos, Matthijs J H M -- Vitart, Veronique -- Volzke, Henry -- Wellmann, Jurgen -- Yu, Lei -- Zhao, Wei -- Allik, Juri -- Attia, John R -- Bandinelli, Stefania -- Bastardot, Francois -- Beauchamp, Jonathan -- Bennett, David A -- Berger, Klaus -- Bierut, Laura J -- Boomsma, Dorret I -- Bultmann, Ute -- Campbell, Harry -- Chabris, Christopher F -- Cherkas, Lynn -- Chung, Mina K -- Cucca, Francesco -- de Andrade, Mariza -- De Jager, Philip L -- De Neve, Jan-Emmanuel -- Deary, Ian J -- Dedoussis, George V -- Deloukas, Panos -- Dimitriou, Maria -- Eiriksdottir, Guethny -- Elderson, Martin F -- Eriksson, Johan G -- Evans, David M -- Faul, Jessica D -- Ferrucci, Luigi -- Garcia, Melissa E -- Gronberg, Henrik -- Guethnason, Vilmundur -- Hall, Per -- Harris, Juliette M -- Harris, Tamara B -- Hastie, Nicholas D -- Heath, Andrew C -- Hernandez, Dena G -- Hoffmann, Wolfgang -- Hofman, Adriaan -- Holle, Rolf -- Holliday, Elizabeth G -- Hottenga, Jouke-Jan -- Iacono, William G -- Illig, Thomas -- Jarvelin, Marjo-Riitta -- Kahonen, Mika -- Kaprio, Jaakko -- Kirkpatrick, Robert M -- Kowgier, Matthew -- Latvala, Antti -- Launer, Lenore J -- Lawlor, Debbie A -- Lehtimaki, Terho -- Li, Jingmei -- Lichtenstein, Paul -- Lichtner, Peter -- Liewald, David C -- Madden, Pamela A -- Magnusson, Patrik K E -- Makinen, Tomi E -- Masala, Marco -- McGue, Matt -- Metspalu, Andres -- Mielck, Andreas -- Miller, Michael B -- Montgomery, Grant W -- Mukherjee, Sutapa -- Nyholt, Dale R -- Oostra, Ben A -- Palmer, Lyle J -- Palotie, Aarno -- Penninx, Brenda W J H -- Perola, Markus -- Peyser, Patricia A -- Preisig, Martin -- Raikkonen, Katri -- Raitakari, Olli T -- Realo, Anu -- Ring, Susan M -- Ripatti, Samuli -- Rivadeneira, Fernando -- Rudan, Igor -- Rustichini, Aldo -- Salomaa, Veikko -- Sarin, Antti-Pekka -- Schlessinger, David -- Scott, Rodney J -- Snieder, Harold -- St Pourcain, Beate -- Starr, John M -- Sul, Jae Hoon -- Surakka, Ida -- Svento, Rauli -- Teumer, Alexander -- LifeLines Cohort Study -- Tiemeier, Henning -- van Rooij, Frank J A -- Van Wagoner, David R -- Vartiainen, Erkki -- Viikari, Jorma -- Vollenweider, Peter -- Vonk, Judith M -- Waeber, Gerard -- Weir, David R -- Wichmann, H-Erich -- Widen, Elisabeth -- Willemsen, Gonneke -- Wilson, James F -- Wright, Alan F -- Conley, Dalton -- Davey-Smith, George -- Franke, Lude -- Groenen, Patrick J F -- Hofman, Albert -- Johannesson, Magnus -- Kardia, Sharon L R -- Krueger, Robert F -- Laibson, David -- Martin, Nicholas G -- Meyer, Michelle N -- Posthuma, Danielle -- Thurik, A Roy -- Timpson, Nicholas J -- Uitterlinden, Andre G -- van Duijn, Cornelia M -- Visscher, Peter M -- Benjamin, Daniel J -- Cesarini, David -- Koellinger, Philipp D -- AA09367/AA/NIAAA NIH HHS/ -- AA11886/AA/NIAAA NIH HHS/ -- BB/F019394/1/Biotechnology and Biological Sciences Research Council/United Kingdom -- CZB/4/710/Chief Scientist Office/United Kingdom -- DA024417/DA/NIDA NIH HHS/ -- DA029377/DA/NIDA NIH HHS/ -- DA05147/DA/NIDA NIH HHS/ -- DA13240/DA/NIDA NIH HHS/ -- ETM/55/Chief Scientist Office/United Kingdom -- F31 DA029377/DA/NIDA NIH HHS/ -- G0600705/Medical Research Council/United Kingdom -- G0700704/Medical Research Council/United Kingdom -- G9815508/Medical Research Council/United Kingdom -- K05 AA017688/AA/NIAAA NIH HHS/ -- MC_PC_U127561128/Medical Research Council/United Kingdom -- MC_UU_12013/1/Medical Research Council/United Kingdom -- MC_UU_12013/3/Medical Research Council/United Kingdom -- MC_UU_12013/5/Medical Research Council/United Kingdom -- MH016880/MH/NIMH NIH HHS/ -- MH066140/MH/NIMH NIH HHS/ -- MR/K026992/1/Medical Research Council/United Kingdom -- P01 AG005842/AG/NIA NIH HHS/ -- P01 CA089392/CA/NCI NIH HHS/ -- P01 GM099568/GM/NIGMS NIH HHS/ -- P01-AG005842/AG/NIA NIH HHS/ -- P01-AG005842-20S2/AG/NIA NIH HHS/ -- P30 AG012810/AG/NIA NIH HHS/ -- P30-AG012810/AG/NIA NIH HHS/ -- R01 AA009367/AA/NIAAA NIH HHS/ -- R01 AA011886/AA/NIAAA NIH HHS/ -- R01 DA013240/DA/NIDA NIH HHS/ -- R01 HL090620/HL/NHLBI NIH HHS/ -- R01 HL105756/HL/NHLBI NIH HHS/ -- R01 HL111314/HL/NHLBI NIH HHS/ -- R01 MH066140/MH/NIMH NIH HHS/ -- R37 DA005147/DA/NIDA NIH HHS/ -- T32 AG000186/AG/NIA NIH HHS/ -- T32 MH016880/MH/NIMH NIH HHS/ -- T32-AG000186-23/AG/NIA NIH HHS/ -- U01 AG009740/AG/NIA NIH HHS/ -- U01 DA024417/DA/NIDA NIH HHS/ -- Z01 AG001050-01/Intramural NIH HHS/ -- ZIA AG000196-03/Intramural NIH HHS/ -- ZIA AG000196-04/Intramural NIH HHS/ -- New York, N.Y. -- Science. 2013 Jun 21;340(6139):1467-71. doi: 10.1126/science.1235488. Epub 2013 May 30.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Applied Economics, Erasmus School of Economics, Erasmus University Rotterdam, Rotterdam, Netherlands.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/23722424" target="_blank"〉PubMed〈/a〉

Description: [1]  In our recent paper [6], the sensitivity of infrasound to the upper atmosphere is investigated using impulsive signals from the Tungurahua volcano in Ecuador. We reported on the coherent variability of thermospheric travel times, with periods equal to those of the tidal harmonics. Moreover, it was shown that the error in predicted thermospheric travel time is in accord with typical uncertainties in the upper atmospheric wind speed models. Given the observed response of the infrasound celerities to upper atmospheric tidal variability, it was suggested that infrasound observations may be used to reduce uncertainty in the knowledge of the atmospheric specifications in the upper atmosphere. In this paper, we discuss the estimation of upper atmospheric wind model updates from the infrasound data described in the aforementioned paper. The parameterization of the model space by empirical orthogonal functions is described; it is found that the wind model in the upper mesosphere and lower thermosphere can be described by a four-parameter model. Due to the small dimensionality of the model space, a grid search method can be used to solve the inverse problem. A Bayesian method is used to assess the uncertainty in the inverse solution given the a priori uncertainty in the data and model spaces and the non-linearity of the inverse problem at hand. We believe that this is the first study in which such methods are applied to real infrasound data, allowing for a rigorous analysis of this inverse problem. It is found that the complexity of the a posteriori model distribution increases for a larger dimensional model space and larger uncertainties in the data. A case study is presented in which the non-linear propagation from source to receiver is simulated using an updated wind model and non-linear ray theory. As non-linear propagation effects further constrain the propagation path, this is a way to check the physical self-consistency of the travel time inversion approach. We obtain excellent agreement between the simulated and observed waveforms.

Description: Seismic data collected during explosion experiments performed as part of the TAiwan Integrated GEodynamics Research (TAIGER) project provide an excellent opportunity to obtain high-resolution images of the structure of the crust and upper mantle beneath Taiwan. The most significant feature observed at near-source stations located on the western coastal plain in Taiwan is high-energy later arrivals. These high-amplitude multiples almost completely mask the lower-amplitude signals (seismic refraction and wide-angle reflection) from the deep crust. The later arrivals are identified as free-surface-reflected multiples. The nature and generation of these high-energy, multiple diving waves are demonstrated using synthetic examples. Their generation requires the presence of a steep velocity gradient in the shallow crust. A detailed analysis of the observation data provided information on the velocity gradients in this region. An accurate layer-velocity model, including the boundary orientation and its depth, and velocity gradient, was constructed based on a 1D waveform simulation and 2D seismic raytracing modeling for travel times. The present results indicate that the thick sediment in the survey area dips shallowly to the east, has a surface P -wave velocity of , and an average velocity gradient of about 0.72/s from the surface to 3.0-km depth. The thick sediment of the 2D model shows lateral variations in velocity gradient, increasing from west to east. This velocity model may provide useful information for future data processing to reduce multiple diving waves with the aim of enhancing the deep-surface refraction/reflection signal. The velocity gradient calculated for the thick sediment of the western coastal plain may require a revision of the regional seismic velocity model developed for southwestern Taiwan, to improve the accuracy of regional hypocenter determinations, and to predict the strong ground motions produced by large earthquakes beneath this region.

Description: Non-stoichiometric, carbon-containing crandallite from Guatemala and plumbogummite from Cumbria have been characterized using electron microprobe (EMPA) and wet-chemical analyses, Rietveld analysis of powder X-ray diffraction (PXRD) patterns, and infrared (IR), Raman and cathodoluminescence (CL) spectroscopies. The samples contain 11.0 and 4.8 wt.% CO2, respectively. The IR spectra for both samples show a doublet in the range 1410-1470 cm-1, corresponding to CO3 vibrations. Direct confirmation of CO3 replacing PO4 was obtained from difference Fourier maps in the Rietveld analysis. Carbonate accounts for 67% of the C in the plumbogummite and 20% of the C in the Guatemalan crandallite, the remainder being present as nano-scale organic carbon. The CO3 substitution for PO4 is manifested in a large contraction of the tetrahedral volume (14-19%) and by a contraction of the a axis, analogous to observations for carbonate-containing fluorapatites. Stoichiometric crandallite from Utah was characterized using the same methods, for comparison with the non-stoichiometric, carbon-bearing phases.

Description: Secondary phosphate assemblages from the Hagendorf Sud granitic pegmatite, containing the new Mn-Al phosphate mineral, nordgauite, have been characterized using scanning electron microscopy and electron microprobe analysis. Nordgauite nodules enclose crystals of the jahnsite-whiteite group of minerals, showing pronounced compositional zoning, spanning the full range of Fe/Al ratios between jahnsite and whiteite. The whiteite-rich members are F-bearing, whereas the jahnsite-rich members contain no F. Associated minerals include sphalerite, apatite, parascholzite, zwieselite-triplite solid solutions and a kingsmountite-related mineral. The average compositions of whiteite and jahnsite from different zoned regions correspond to jahnsite-(CaMnMn), whiteite-(CaMnMn) and the previously undescribed whiteite-(CaMnFe) end-members. Mo-K{alpha} CCD intensity data were collected on a twinned crystal of the (CaMnMn)-dominant whiteite and refined in P2/a to wRobs = 0.064 for 1015 observed reflections.

Description: Magnesium hydroxyfluoride, Mg(OH)F, has been synthesized by a subcritical hydrothermal route from a 1:1 molar mixture of brucite, Mg(OH)2, and sellaite, MgF2 with a rutile type structure, in excess water. Using a combination of synchrotron X-ray and time-of-flight neutron powder diffraction, the structure of Mg(OH)F has been solved in the diaspore space group Pnma with a = 10.116(3), b = 4.6888(10) and c = 3.0794(7) Å at ambient conditions. The most intense diffraction lines are [dobs (hkl) Iobs]: 2.291 (211) 10, 4.253 (101) 7, 1.747 (212) 7, 2.229 (401) 6 and 1.480 (610) (4) Å, with the largest d-spacing at 5.058 Å. Sharp infrared stretching bands are located at 3679 and 3645 cm -1, with a broader band at 3535 cm -1. The topology of the structure is intermediate between that of the OH and F endmembers, being derived through notional shearing nearly normal to the sheets of octahedra of the CdI2/Mg(OH)2-type structure. Further similar shearing at an interval ½a would lead to a Cd(OH)F-type structure, which is also related to the rutile structure type. The observations and model presented here indicate a close correlation between the structural properties of the endmembers and Mg(OH)F.

Description: Lead-bearing phyllotungstite from the Clara mine in the central Black Forest, Germany has a formula (Cs 0.41 )Na 0.14 K 0.05 $${\mathrm{Pb}}_{2.01}^{2+}$$ Ca 0.26 [ $${\mathrm{W}}_{10.87}^{6+}$$ $${\mathrm{Fe}}_{3.13}^{3+}$$ O 35.75 (OH) 6.25 ](O(H 2 O) 3 ). X-ray diffraction patterns exhibit pseudohexagonal symmetry, but refinement of single-crystal synchrotron data has shown that the true symmetry is orthorhombic, Cmcm , with a = 7.298(1), b = 12.640(2), c = 19.582(4) Å, and that the pseudohexagonal character is due to submicrometre-scale cyclical twinning by rotation about the pseudohexagonal c axis. The structure can be described in terms of an ordered intergrowth, parallel to (001), of (111) py blocks with pyrochlore-type structures, which are ~6 Å in width, and two-layer wide regions with a hexagonal tungsten bronze (HTB) type structure. Caesium atoms occupy 18-coordinate cavities in the HTB regions, and H 2 O molecules occupy sites in the A 2 B 2 O 6 pyrochlore blocks. The lowering of symmetry from hexagonal to orthorhombic is due to partial ordering of W and Fe in the octahedral B sites and of Pb and vacancies in the A sites of the pyrochlore blocks. The ideal formula for the intergrowth structure (with no vacancies) is C 2 A 10 [ B 14 (O,OH) 42 ] 4 , where C is the cavity site in the HTB slabs. The mineral has only 21% occupancy of the C site and 25% occupancy of the A site, but full occupancy of the site. There may be some mixing of Cs and H 2 O between the C and sites.